Clupea harengus (Atlantic herring): 105892249
Help
Entry
105892249 CDS
T09045
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105892249 (zgc:91944)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
105892249 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
105892249
NCBI-ProteinID:
XP_031441652
Ensembl:
ENSCHAG00000018717
UniProt:
A0A6P8H1R6
LinkDB
All DBs
Position
19:complement(26429132..26452180)
Genome browser
AA seq
486 aa
AA seq
DB search
MRQWCLPAVAPRTEPLPTGRLSPALSDARMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALDSLERLDSDHRSPSCCDNHPDPPTVVANAATVASSSSSSSSSSLTSATTQTPVMEA
SLSPSNSYEASPPPLYPPSGVQRSFSYDLPEEDWDLEEKVEEYMRRDSNLVKEEIKAFLN
NRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSESQHT
QSPRSRNDAPWSRQRELLLHLLPWYSAHQQAQAQTVSPHAGATLSMRSLVKEEPDWRMGG
SPGDRGIMGGPFRLRRGSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPG
CKLSEFERVTALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEETEPQEF
PEQVPQRFTEQEELPQKKDADQDGSSLTAMEVAPLPLPLPLPLPSPSTQLLDQKFEESKR
EAVDEE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctacctgccgtggctccacgcactgaaccgctccctacgggccga
ctgtcgcctgcgctctcagatgccaggatggagtgttgtgatgtggagcctcgctacacc
atcgagcagattgacctccttcagcgtcttagactttcaggcatgaccaaaccgcagatc
attcaggctctagactctttggagcggcttgattctgaccaccgctccccttcctgctgt
gacaaccaccctgatcctcccactgttgttgccaatgcagcaacagtcgcgtcttcatcg
tcgtcgtcatcatcttcctctctcacctccgccaccacacagacccctgtgatggaggcc
tcgctgtcaccaagcaacagctatgaggcctcacctccgcccctttacccccctagtgga
gtccagcgctcattcagctatgacctgccggaggaggactgggacctggaggagaaggtg
gaggagtacatgaggagagatagcaacttggtgaaggaggagatcaaggccttcttgaat
aacaggaggatctctcaggccatcgttggacaggtcacaggcatcagccaaagctacatc
tcccaatggctgctgcagcagggtttggagatgagcgactcaaagcgcagggccttctac
cggtggtacctgctggaacgcaacagcccaggaatcagatggagcgaaagccagcacacg
cagagccctaggagcaggaatgacgccccctggagtaggcagagggaactgctgctgcac
ctgctgccatggtactctgcccaccagcaggctcaggctcagacagtgtctcctcatgca
ggagccacgttgtccatgcgctccctggtgaaggaggaacctgactggaggatggggggt
agccctggggatcgtggaatcatgggcgggcctttccggctgcgcagggggagccgtttt
acctggaggaaggagtgccagtcaatcatggagagtttcttcatggaaaatcagtatcct
gatgaggctaagagagaggagatcgccaatgcctgcaactcagtcatccagaaaccaggc
tgcaagctgtctgagtttgagcgggtcacagcgctgaaggtgtacaactggtttgccaac
cgcaggaaggagatgaagagacgtgccaacattgaggcagccatcttggaaagccatggc
atagaggtgcccagccccagctgtcactcaaatggggaggagaccgagccacaggagttt
cctgagcaggtgcctcagcgtttcactgaacaggaggagctgccacagaagaaggacgct
gatcaagatggaagctcgttgactgctatggaggtagcacccctccccctccccctcccc
ctccccctccccagcccctccacccagctgcttgatcagaagttcgaggaatccaaacga
gaagccgtggacgaggagtga
DBGET
integrated database retrieval system
