Clupea harengus (Atlantic herring): 105892253
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Entry
105892253 CDS
T09045
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
char01006
]
105892253 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105892253 (trit1)
Enzymes [BR:
char01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
105892253 (trit1)
Prenyltransferases [BR:
char01006
]
Compound prenylation
tRNA dimethylallyltransferase
105892253 (trit1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
105892253 (trit1)
Prokaryotic type
105892253 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_16
FANCA_helical
PPV_E1_C
CTU2
OrsD
Motif
Other DBs
NCBI-GeneID:
105892253
NCBI-ProteinID:
XP_012673952
Ensembl:
ENSCHAG00000004147
UniProt:
A0A6P3VKN1
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All DBs
Position
19:complement(26680336..26706422)
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AA seq
482 aa
AA seq
DB search
MRKTTDHSVVMAATTLGMQNALKKTVLPPLVVILGATGTGKSKLAIEIGKILQGEIISAD
SMQVYKGLDIITNKVTAEEHVQCPHHMISFLDPLVSSYSVVDFRNSALQLIEDLHQRQKL
PIVVGGTNYYIESLLWKVLIDTRSGSEDQAQRKCCPDPKMALQKLGVPELHQRLTEVDPD
MAAILHPHDTRKIARSLQVFEETGVAHSRLLEQQREQEGGDFLGGPLRFPDPCIFWLHAD
MQALDKRLDQRVEEMLTQGLITELQNFHLGFNQQMVQENCQDYQHGIFQSIGFKEFHEYL
TADSETSPEEHNRLKSKGVEALKIATRRYARKQNKWVRNRFLKRPDSNVPPVYGLDVTDL
SQWEVTVLKPALHILESLQKGEAPLIEPMRLEGAGQKNKRSQHTCELCERIIIGDLEWSA
HLRSKAHQHHVRKKRRSEATSEHQFPQHTDSRPIPSTEASTRDRSGTQIPGPERTKSQED
MP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaacaactgatcatagtgttgtcatggcggctaccactcttggcatgcagaac
gccctgaagaaaaccgtcctaccacccttggtcgtgatccttggggccacggggactggc
aaatctaaattggcaattgaaatcggtaaaatactgcaaggcgagatcataagcgccgat
tctatgcaggtctacaagggactggacattatcaccaataaagtcactgctgaggagcat
gtccagtgtccccatcacatgatcagcttcttggacccactggttagcagctactcagtg
gtggacttcagaaacagcgcactccagctcatagaagacctgcaccaacgtcagaagctg
cccatagttgtgggaggaaccaactactacatcgagtccctgttgtggaaggtgctgatt
gacactagatcaggcagtgaagatcaggcacagcgtaagtgctgccctgacccaaagatg
gccttacagaagctgggggttcctgaattgcatcaacggctgacagaggtggaccctgat
atggcagccattttgcatcctcatgacacccgcaagattgcaaggagcctgcaggtgttt
gaggaaacaggtgtggcccacagcaggctgctggagcagcagagagaacaggaggggggc
gactttcttggggggccacttagattcccagacccctgcatcttctggctccacgctgac
atgcaggctctggataaacggttggatcaacgggtagaggagatgctcacgcaaggcctc
atcactgaactgcagaatttccacctgggcttcaaccaacagatggttcaggagaactgt
caggactaccagcatggtatcttccagtccatcggtttcaaggagttccacgagtatctg
acagcagacagcgagaccagcccggaggagcacaacaggctgaagagcaaaggtgttgag
gctttgaagattgcgacacgccgttatgctcggaagcagaataagtgggttcgaaaccgc
ttccttaagaggccagattctaatgtgccccctgtatatggcctagatgtgacggatctg
tcgcagtgggaagtcacagtcctcaagcctgctctgcacatcctagagagccttcagaag
ggtgaagcgcctttgattgaaccaatgaggctggagggggcagggcagaagaacaagagg
agccaacacacctgtgagctgtgtgagaggatcatcattggagatctggagtggagcgct
catctgaggtctaaagcccaccagcatcatgtcaggaagaaacggaggtcagaagccact
tcagagcaccagtttccccagcacaccgactcaaggcccatcccatcaacagaggcctcc
actcgggataggtctggaactcaaatcccaggccctgaaagaaccaagtcacaggaagac
atgccatag
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