Clupea harengus (Atlantic herring): 105892280
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Entry
105892280 CDS
T09045
Symbol
nptx1l
Name
(RefSeq) neuronal pentraxin 1 like
KO
K25709
neuronal pentraxin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
105892280 (nptx1l)
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Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_2
DUF16
SlyX
HEAT_ULK4
CTD4
MRP-S27
DUF848
Motif
Other DBs
NCBI-GeneID:
105892280
NCBI-ProteinID:
XP_012673981
Ensembl:
ENSCHAG00000003139
UniProt:
A0A6P3VKP0
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Position
26:complement(8850835..8855229)
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AA seq
422 aa
AA seq
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MEGISWRLFLLSLVLLEGSTQDFGQTQFICTSVPKDMDLCAATMQNSGPAEDLKTTVMQL
RETVLQQKELIMNQKETIRELTSKLSRCESQSLPEPGAGGRRKEPGNTMGDVSRGPSDTL
AQLGQTLQTLKQRLENLEQYSRVNSTAQSNSLKDLLQNKIDDMEKQVLLRVNTLEETKTG
PRNDTDQRNKVESTLTKIHDRITGLEKGPKGNRPLDKFQLTFLLRTNYMYAKVKNSLPEM
YAFTLCMWIKSSASPGVGTPFSYAVPGQANELVLIEWGNNPMEILINDKVAKLPFQINDD
KWHHICVTWTTRDGVWEAYQDGVQRGNGENLAPYHPIKPHGVLVLGQEQDTLGGGFDATQ
AFVGELANFNVWDRKLTTGEIYMLATCNNRAQVGNVFGWAETSIEVFGGATKWPFEPCRP
LN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaggggatctcttggagattgtttttactttctttggtacttttggaggggtctacg
caagatttcggacaaacgcagttcatctgcacgtcggtgcccaaggatatggacttgtgc
gcggccactatgcagaacagtggccccgcagaggatctgaagaccactgtcatgcagttg
agagaaaccgtacttcagcaaaaagagctaatcatgaaccaaaaagagacgatcagggaa
ctaacgtccaagttgtctcggtgtgagagtcagagtctcccggagcctggagcagggggc
aggagaaaagaaccaggcaacactatgggggatgtatcacggggtccgtccgatacactg
gcccaactggggcagacgttacaaaccctgaaacagagactggagaacttggagcaatac
agccgagtcaacagcacagcgcagtcaaatagtctgaaagacctactccagaacaaaata
gacgacatggaaaaacaggtcctgctccgggtcaacacgctggaagagaccaaaactggg
ccgaggaatgacacggaccagcgaaacaaagtggagtcaactctgaccaaaatccacgac
agaatcacaggtctggaaaagggtccaaaaggcaacagaccactggacaagtttcagctg
actttccttctgcgaaccaactacatgtatgcgaaggtcaagaatagcctaccagagatg
tacgccttcaccctctgcatgtggattaaatccagtgcgtcgccaggcgttggcactcca
ttctcctatgcggtcccggggcaggccaacgagctggtgttgattgagtgggggaacaac
cctatggagattctcatcaatgacaaggtggcaaaactacctttccaaatcaacgatgac
aagtggcatcacatctgcgtcacctggaccacaagagacggggtgtgggaagcctatcag
gatggggttcagcgtggcaacggcgaaaacctggccccttaccaccctattaaacctcat
ggagtgctcgtgctcggacaggagcaggatacactgggaggaggtttcgatgcaactcaa
gcatttgttggtgagctggccaattttaacgtgtgggaccgtaagctgacaacgggggaa
atttacatgctggccacctgcaacaacagagcgcaggttggcaacgtctttgggtgggca
gagaccagcatcgaagtattcggtggagcgacgaaatggccatttgagccttgtcgtccg
ctcaactga
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