Clupea harengus (Atlantic herring): 105892282
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Entry
105892282 CDS
T09045
Symbol
rptor
Name
(RefSeq) regulatory-associated protein of mTOR isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04136
Autophagy - other
char04140
Autophagy - animal
char04150
mTOR signaling pathway
char04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105892282 (rptor)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105892282 (rptor)
04136 Autophagy - other
105892282 (rptor)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
105892282 (rptor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892282 (rptor)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
105892282 (rptor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
Beta-prop_EML_2
HEAT
WD40_Prp19
WD40
WD40_WDHD1_1st
HEAT_2
WDR55
Beta-prop_WDR90_POC16_2nd
Cnd1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_2
Beta-prop_EIPR1
PDS5
Motif
Other DBs
NCBI-GeneID:
105892282
NCBI-ProteinID:
XP_042559794
Ensembl:
ENSCHAG00000003256
UniProt:
A0A8M1KD16
LinkDB
All DBs
Position
26:8870841..9014208
Genome browser
AA seq
1349 aa
AA seq
DB search
MKMDAELLHSPVVALAEEEEADMSDWNLPLAFMKKRHSEKIEGSKALAQSWRMKDRMKTV
SVALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRAR
YKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLS
IYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMK
NCIQLAACEATELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEKI
PGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR
SYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQV
WLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLK
LLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMAVFI
LAVIVNSYNTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRD
SAHEKLYSLLSDPIPEVRCAAVFALGTFVGNTAERTDHSTTIDHNVAMMLAQLINDGSPV
VRKELVVALSHLVVQYESNFCTVALQFMEEEKSYSVSSPANTTEPGNLTPVKDSPAIPRL
RSVNSYTNIRAATTARNLNKSLQNLNLNEEGGPVAFSPGNLSTSSSASSTLGSPDNDEYI
LSFETIDKMRRVSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLNCIA
YKATMNARSQRILDCGSSTQSAPASPTSKGTHIHQAGAPHRSKRCSSPSSGSPPMPSASS
SSLTNEVPKPPTRDAPPARPPYTPTLGGQAPHSHQFPRTRKMFDKGPDQGGTAEDGDEPT
PHRHYISATMQTGLCDWSAKYFAQPVMKIPEEHDVESQVRKEREWRFLRNARVRRQSQRI
TQRGVTRLDDQIFINRNPGVPSVVKFHPFNPCIAVADKDSICFWDWEKGERLDYFYNGNP
RYTRITAMEYLNGHDCSLLLTASDDGALRIWKNFADQRNPEMVTAWQGLSDMLPTTRGAG
MVVDWEQETGLLMTSGDVRIIRIWDTEREMKVQDIPTGADSCVTSLSCDPQRSLIVAGLG
DGSVRVYDRRMGPNECRVMTYREHGAWVVKAHLQRETDGQIISVSVNGDVRFFETRAPDS
VNVLQTVKGLTALDIHPRANLFACGSMNQFIAVYNSNGDVISNIKYYDGFMGQRIGAISC
LAFHPYWPHLAVGSNDYYMSIYSAEKRLR
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacgcggagctactccactcgcccgtggtggcgctggcggaggaggaggag
gccgacatgagcgactggaacctgccactggccttcatgaagaagcgccactcggagaag
atcgagggctccaaggcgctggcacagagctggaggatgaaggacaggatgaagacggtg
agcgtggccctggttctctgtctcaacgtgggagtggacccccctgatgttgtcaagacc
tcgccttgtgccagactggagtgctggatcgacccactctccatgagtccacagaaagcc
ctagaaaccatcggggccaacctacagaagcaatacgagaactggcagcctcgggcccgc
tacaagcagagtctggaccccacggtggacgaggtgaagaagctgtgcacgtcgctgcgg
cggaacgccaaggaggagcgcgtgctcttccactacaacggccacggcgtgccccggccc
accgtcaacggggagatctgggtcttcaacaagaactacactcagtacatccccctctcc
atctacgacctgcagacctggatgggcagcccctccatctttgtgtacgactgctccaac
gccggcatcatcgtcaagtccttcaaacagtttgccctgcagagggagcaggagctggag
gtggcggccatcaaccctaaccaccccctggctcagatgcccctgcccccctccatgaag
aactgcatccagctggcggcgtgtgaggccactgagctgctgcccatgaaccctgacctc
cccgctgacctgttcacctcctgcctcaccacacccatcaagattgccctccgctggttc
tgcatgcagaagagtgccaagctggtgccaggggtgacactggacctgattgagaaaata
cctggcagactgaatgacagaagaacgccactgggggaacttaattggatcttcacggcg
atcacagacaccatcgcatggaatgttctacccagagacctctttcagaagctcttccgg
caggacctgctggtggccagcttattccgcaacttcctgttggccgagaggataatgagg
tcatacaactgcacgccggtcagcagccctcgccttccaccaacctacatgcatgccatg
tggcaggcctgggacctggcggtggacatctgcctctcccaactccccaccatcatcgag
gagggcaccgctttcaggcacagtcccttcttcgctgagcagctgacagccttccaggtg
tggcttaccatgggcgtggagaacaggaaccccccagagcagcttcctatcgtcctgcag
gtcctcctgagccaggtgcaccgcctccgagcactggacctactcggccgcttcctggac
ctgggaccgtgggccgtgagtttggccctgtcggtggggatcttcccgtacgtgctgaag
ctgctgcagagctcggcccgggagctgcggccgctgctggtgttcatctgggccaagatc
ctggccgtggacagctcctgccaagccgacctcgtaaaggacaacgggcacaagtacttc
ctgtcggttttggctgatccgtacatgcctgcggagcaccggaccatggctgtgttcatt
ctggctgtcatagtcaatagctacaacactggccaggaggcctgtctccagggcaacctg
attgccatttgcctggagcagctgaacgacccgcaccctctgctgcgccagtgggtggcc
atctgcctgggccgcatctggcagaacttcgactcggcgcgctggtgcggcgtgagggac
agcgcgcacgagaagctctacagcctgctgtccgaccccatcccagaggtgcgatgtgcg
gcggtcttcgctctcgggacctttgtgggcaacacggcggagcggacggaccactccacc
accatcgaccacaacgtggccatgatgctcgcacagctcatcaacgacggcagtcccgtc
gtgcgcaaggagctggtggtggccctgagtcacctggtggttcagtacgagagtaacttc
tgcaccgtggcgctgcagttcatggaggaggagaagagctattctgtgtcctcgcctgcc
aacactacagagcccggtaacctgaccccggtgaaggacagcccagccatcccccgcctg
cgctcggtcaactcctacaccaacatccgcgccgccaccaccgcgcgcaacctcaacaag
agcctccagaacctcaacctcaacgaagaaggtggtccggttgccttctccccggggaac
ctgagcaccagcagcagcgccagcagcacactgggcagcccggacaacgacgagtacatc
ctgtccttcgagaccatcgacaagatgaggagggtcagctcctactcctccctcaactcc
ctcatcggtgtgtcgttcaacagcgtctacacacagatctggagggtactcttgcactta
gcggccgaccccttcccagaggtgtcggacctggccatgaaggtcctcaactgtattgca
tacaaggctactatgaatgcccgatcgcagaggattctggactgcggctcctccacccag
tcggccccagccagccctaccagcaaaggcacgcacatacaccaagctggtgcgccccac
agatccaaacgctgctcatctccttccagcggctccccccccatgcccagtgccagcagc
tccagcctgaccaacgaggtgcccaagccccccacccgcgacgcgccccccgcccggccc
ccctacaccccgactctggggggccaggcaccccattctcaccagttcccccgcactcgc
aagatgtttgacaaagggcccgaccaggggggcactgctgaagacggagacgagccgacc
ccccacaggcactacatcagcgccaccatgcagacgggtctgtgcgactggagcgccaag
tactttgcccagcccgtcatgaagattccagaggagcatgatgtggagagtcaggtgcgg
aaggagcgggaatggcgtttcctgcggaatgctcgtgtgcggaggcagagccagcgcatc
acgcagcgaggtgtgactcggctggacgaccagatcttcatcaaccggaaccctggcgtt
ccatctgtggtcaagttccaccctttcaacccctgcattgctgtggctgataaggacagc
atatgcttttgggactgggagaagggagagcggcttgattacttctacaatggcaaccct
cgctacacacgcatcacggccatggagtatctgaatggacacgactgctcactactactc
actgcatctgatgacggagcattaagaatctggaagaactttgccgatcagcggaaccca
gagatggtgacagcctggcagggtctatctgatatgctacccactacaagaggcgctggt
atggtggtggactgggagcaggagacagggctgctgatgacctcgggggacgtgcgcatc
atccggatctgggacacggagagggagatgaaggttcaggacatcccgacaggagcggac
agctgtgtgaccagcttgtcgtgtgacccccagcgttcgctcatcgtggccggtctgggc
gacggttcagtgagagtgtacgaccggcggatgggtcccaacgagtgtcgagtgatgacg
tatcgggaacatggtgcctgggtggtcaaggcccacctgcagagggagacggatggccag
atcatcagtgttagtgtgaatggagacgtgcgtttctttgagacgcgcgcgccagattct
gtgaacgtgctgcagacggtgaagggtctgaccgcgctggacatccatccacgtgccaac
ctctttgcctgtggctccatgaaccagttcatagccgtgtacaactccaacggcgacgtc
atcagcaacatcaagtactacgacggcttcatgggccagaggattggggccatcagctgc
ctggccttccacccttactggccgcacctggccgtgggcagtaacgactactacatgtcc
atctactcggccgagaagagactcagatag
DBGET
integrated database retrieval system
