Clupea harengus (Atlantic herring): 105892283
Help
Entry
105892283 CDS
T09045
Symbol
pecam1b
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04148
Efferocytosis
char04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105892283 (pecam1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105892283 (pecam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
char04090
]
105892283 (pecam1b)
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105892283 (pecam1b)
04091 Lectins [BR:
char04091
]
105892283 (pecam1b)
CD molecules [BR:
char04090
]
Proteins
105892283 (pecam1b)
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
105892283 (pecam1b)
Lectins [BR:
char04091
]
I-type lectins (Siglecs)
105892283 (pecam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_C17orf99
Zwei_Ig_N
DUF4692
Motif
Other DBs
NCBI-GeneID:
105892283
NCBI-ProteinID:
XP_031419879
Ensembl:
ENSCHAG00000004453
UniProt:
A0A6P8F4R4
LinkDB
All DBs
Position
26
Genome browser
AA seq
753 aa
AA seq
DB search
MCEHQRPSHRIGTCCLLCLLLLLLFTCQRVKADVSIDDLRLSFHPSPNVQRDTNVTIKCH
ASVSRSSGFSSPQYAFSIKKDNKELHRTLSTSNTYDYPIEAARVSDSGSYQCFLSIEGKS
RSSEREKLKVTGTHKAVIRVDRSSIQEGDEVTVTCAAPGERGSFIFFFYVDNKEVRNNES
SSEEYSVQLRLKHSGPNNLTCDYTIRLFSESVPSAISRQAIVVVREIDISVLLTISPSMT
IIEADNFSVSCMVNSPNKSESVLLIKGSNILSTGKGKTDYGQTAGTGHSGEYMCKVEING
VFKIDKKMLTVKELFSRPTLTSSPPEAFEGDFIRLSCQSTNVSLESIRKEIKYSIFKDGN
RRSINNENGQMTARAGPSADGNYTCLAEAKLISKESPVIVIRSKVLASKPEISVKDKVIL
DRPFQIQCKSNGTLPIKYTLFEDDKVVYEKTVHHPREEALFATSISRKEHIHKFLCRAQN
SPRVHVSSQPLKAFVVEPLGKPLLTTLPVPDNVEEGSELILICNVPSGTPPITFKWYWDS
SSSKAHLHTSTVNANSSYHTIQWMERMDSGEYFCEAVNPANNVKSDPVTIHVKLASWKKV
LIGAIFLLVVIALILVFIVRCRAKRGKREAATELSVKPASPKSDDSLAVNMGLDTPFLNK
VGVDIVPSVWTDRQSSSDSSSDRSRAPSHNGPDVEYTEVVHPQPLDPARVPLKKGTDTVY
SELQTAPLDPSEHVDNGTVEYAELNHDLPEPVD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagcaccaacggccctctcacaggattggcacctgctgcctcctctgcctcctc
ctcctcctcctcttcacatgccaaagagtgaaagccgatgtcagtatcgatgacctccgc
ctctcgtttcatcccagtcctaatgttcagagggacacaaatgtgacaattaaatgccat
gccagtgttagcagaagctcaggctttagctcgccgcaatatgcattcagcatcaagaag
gacaacaaagaactgcacaggaccctcagcacttcaaacacctatgactaccctatcgaa
gcggctagggtgtctgactcggggtcctaccagtgcttcctgtccatcgagggaaagagc
cgatccagcgagagggagaaactgaaagtgacaggaactcataaagcagttattcgtgtg
gacaggagcagtatccaagagggtgatgaagtaacggtcacatgcgctgccccaggagag
agaggctcgtttatctttttcttctacgtggacaacaaagaggttcgcaataatgagtcc
tcatctgaagaatacagcgtacaactgcggctcaaacacagcggccccaacaatctgacc
tgcgattacaccattagactgttcagtgaatccgttccatcggccatcagtaggcaagcc
atagtcgttgtcagagagatagacatttctgttttgctgaccatctccccctccatgaca
atcatcgaggcagacaacttcagtgtctcctgcatggtgaactccccgaataagtcggag
agtgtccttttaatcaagggttcgaatattctttccactgggaaaggcaagactgattat
ggacaaacagcaggaacaggccactctggagagtacatgtgcaaagtggagatcaatggt
gttttcaagatagacaagaagatgttgacagtcaaagagcttttctcgaggcccacgctg
accagttctccaccagaagcgtttgaaggcgattttatccgtctttcctgccaaagcacc
aacgtctccttagagagcattaggaaagaaataaagtactccatttttaaagacggcaat
cgtcgatcaataaacaacgaaaatggccaaatgactgcccgagcaggcccttcagccgat
ggaaattacacctgcctggcagaggcaaagctcatctcgaaggaaagcccagtgatcgtc
atcagatctaaagtgcttgcctccaagcctgaaattagtgtcaaggataaagtcattctg
gatcgcccatttcaaatccagtgcaagtccaacggcacccttcccatcaagtacacactg
ttcgaagatgataaggtcgtctacgagaaaaccgtgcatcacccacgggaggaggctctc
ttcgccaccagcatctccaggaaggaacacatccacaagttcctgtgccgtgctcagaac
tccccccgtgtccacgttagcagccaacctctgaaggcctttgttgtagagcctctgggt
aaacccctgctgacaaccctgcctgtcccagacaacgttgaagagggctctgagctcatc
ctcatctgtaacgttcccagcgggacgccgcccatcaccttcaagtggtattgggattcc
tccagtagcaaagcccacctccacaccagcacggtcaatgccaactctagctatcacacc
atccagtggatggagagaatggacagtggggaatacttctgcgaggccgtcaaccctgcc
aacaatgtgaagagtgatccggtcaccatccacgtgaagttggcctcctggaagaaagtg
ttgattggtgccatcttcctcctggtcgtcatcgccctgatcctcgtcttcatcgtccgc
tgcagagccaagagaggtaaaagagaggcggctactgaactgtcagtaaagcctgcgagc
cctaaatcagatgactctctcgcagtgaatatgggccttgacacgccgtttttaaacaaa
gtgggtgtggacatcgtaccgagcgtctggactgacaggcagtcaagctcagacagcagc
agtgaccggagcagggccccctcgcacaacggtcctgacgtggagtacaccgaggtggtc
catccacagcctctagatccagccagagttcctttaaagaagggtaccgacaccgtgtac
agtgagctccaaacagctccgctagacccctctgagcatgtagataacggtacagtggag
tatgctgagctaaatcatgaccttcctgagccggtagactga
DBGET
integrated database retrieval system
