Clupea harengus (Atlantic herring): 105892396
Help
Entry
105892396 CDS
T09045
Symbol
tbc1d2b
Name
(RefSeq) TBC1 domain family member 2B
KO
K20166
TBC1 domain family member 2B
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892396 (tbc1d2b)
Membrane trafficking [BR:
char04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105892396 (tbc1d2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
PH_6
XLF_CC
USP8_interact
DUF7491
Motif
Other DBs
NCBI-GeneID:
105892396
NCBI-ProteinID:
XP_031420696
Ensembl:
ENSCHAG00000007897
UniProt:
A0A6P8F9T5
LinkDB
All DBs
Position
3:complement(18454817..18485215)
Genome browser
AA seq
968 aa
AA seq
DB search
MHPLKTRKKVPRKMHEEDGGKADPNRNSRVLATKSLDVAELDASKEDAPKLCGYLNKLAG
KGPLRGFKTRWFVYDPRKCYLYYFKSPQDALPLGHIEIADACFSYDVEGEEGQFEIRTAG
KEFLLKAPNKQVMQYWLQQLQQKRWDFCNTRGAGTVRDSWSSPTTLYPLTGLVAKDTGTA
AAVLYEKPSECMESVRSDFTVETNTNGLVGVQSARQPTPALNSLKNWGSELRNSMSHLRA
GRGSENRRSVFYAGPSEDWEMLDHPAKDPPEHKPQTEHPRRESPSHAHRHSIGSAFTFDF
GRSTGRARRPFLREGLLGSARSSRSAEGSPVECNGNKGSELQLRLHNQQEELSRMQEEQT
HLREELAGQKELVRLLQQTLRSTQCERRPAAAAAPASGDPGQAQAQADALLQEREGQIQA
LCGHMERLALEKDSLQQELKTLKIKVGEINEQLGMLMETIQAKDEVIIKLYQQEEEEGGQ
AAEGGSPLANKDQLEFATLKDNLEGYKSQNNFLNKEILELTALRRNAESREKALEAKFTA
REAKLCQVESKYLVLLQEVKTPLGASSEVITRLLEDALEVESGDQQEQTFLKPHTVSEYD
VYGFKTLPEEEDEEEMLVAKVRALDLKTISLTDQEVSVSVKWDNYLAGTMNREMTRSPEL
KALIRSGVPHVHRPKVWRWCVWLHTRKVRECLAEDYYRGLLSLAGEKQNPASKQIELDLL
RTLPNNKHYSSPSSDGVQKLRNMLLAFSWRCPDIGYCQGLNRLAAIALLYLEEEDAFWCL
TAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMCEKLPRLHAHFEQYKVDFSLITFNWFLVV
FVDSVVSDILFKIWDSFLYEGPKIIFRVALAVFKYKEEEFLKLQDSMAIFKYLRYFTRTI
LDSRKLMNIAFVDMNPFPLRQIQNRRTFHLEKVRLELTELEAIRQTFLREREISQQGRDL
ISDDEEDN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgctcaagactcgcaagaaagttccaagaaagatgcacgaagaggatggtggt
aaggccgatccgaacaggaattcacgggttttggctacgaagtctcttgatgtggccgag
cttgatgcttcgaaggaagatgcccccaaattatgcggctacttgaacaaacttgcaggc
aaggggccgttgaggggcttcaagacccgatggtttgtctacgacccgaggaaatgctat
ctatattacttcaagagtccccaagacgctctcccactcggacatattgaaatagccgat
gcatgcttcagctatgatgtggaaggagaagaaggacagttcgagatacgcactgctggg
aaggagtttttactcaaggctcctaataagcaggtgatgcagtactggctgcagcagctg
cagcaaaaacgctgggacttctgtaacacccgcggggccggcaccgtcagggacagctgg
agctcccccaccaccctctaccccctcaccggcctggtggccaaagacacaggcaccgct
gcggctgtgctgtatgagaagcccagcgagtgcatggaaagcgtgcggagcgacttcacc
gtggagacgaacaccaacggcctggtgggcgtccagtcggcacggcaacccaccccagcc
ctaaactccttgaagaactggggctctgagctcaggaactccatgtctcacctgcgtgcc
ggtcggggcagtgagaacaggcgcagcgtcttctacgcggggcccagtgaggactgggag
atgttggaccatccagccaaggacccccctgaacacaagccccagacggagcacccacgc
cgtgagagcccttcacacgcacacagacattccatcggctcagcgttcaccttcgacttc
gggcggagcacgggacgggcgaggcgccccttcctgcgcgaagggctcctgggctctgcc
cggtccagccgcagcgccgaggggtctccggtggagtgtaacggcaataagggctccgag
ctgcagctgcgcctccacaaccagcaggaggagctctcgcgcatgcaggaggagcagaca
cacctcagggaggagctcgccggacagaaggagctggtgcgactcctccagcagacgctt
cggagtacccagtgcgagcggcgcccggcggcggcggcggcgccagcgtcgggtgatccc
gggcaagcgcaggcccaggcagacgccctccttcaggagcgcgaggggcagatccaggcc
ctctgcggacacatggagcggctggccctggagaaagacagcctgcagcaggagctgaag
acgctcaagatcaaggtgggcgagatcaacgagcagctgggcatgctcatggaaaccatc
caggccaaggacgaggtcatcatcaaactgtaccagcaagaggaggaggagggtgggcag
gcggccgaaggaggctccccactcgccaacaaggaccagctcgagttcgccaccctcaag
gacaatctagagggctacaaatcccagaacaatttcctgaacaaggagatcctggagctg
actgccctacgcaggaatgctgagagcagggagaaagctctggaggcaaagttcacagcc
cgggaggccaagctgtgccaggtggagagtaagtacctggtgctcctgcaggaggtaaag
actcctttgggcgcctcctccgaggtcatcacccggctcctggaggacgcgctggaggtg
gagagcggagaccagcaggagcagaccttcctcaagcctcacaccgtcagtgagtatgat
gtctacggctttaagactctcccagaggaggaggacgaggaggagatgctggtggcgaag
gtgcgggctctggacctgaagacgatctcgctgaccgaccaggaggtgtccgtgagcgtc
aagtgggacaactacctggcgggcaccatgaaccgggagatgacgcgctcccccgagctc
aaggcgctgatccgcagcggtgtgccgcacgtccaccggcccaaagtctggcgctggtgc
gtgtggctgcacaccaggaaggtccgagagtgcctggcggaggactactaccggggtctg
ctcagtctggccggcgagaagcagaacccggcctccaagcagatcgagctggacctgctc
cgcacgctgcccaacaacaagcactactcctcgccctcctccgacggcgtccagaagctg
cgcaacatgctgctggccttctcctggaggtgccccgacatcggatactgccaaggcctc
aacaggctggcagccatagccctcctgtatctggaggaggaggatgccttctggtgcctc
actgccatcgtggaggtcttcatgccacgagactactacaccaaaacactgctgggctcc
caggtggatcagcgcgtgtttaaggacctgatgtgtgaaaagctgccgcggctgcacgct
cactttgagcagtacaaggtggatttctccctcatcaccttcaactggttcctggtggtg
tttgtggacagtgtggtcagcgacatcctcttcaagatctgggattccttcctgtacgag
gggcctaagatcatctttcgcgttgcccttgccgtcttcaagtacaaagaagaggagttt
ctgaaactgcaggactccatggccatattcaaatatctccgctacttcacgcgcaccatc
ctggactcaaggaagttgatgaacatagcgtttgtggacatgaacccgttccctctgcgc
cagatccagaaccggcgcacgttccacctggagaaggtccgtctggagctgaccgagctg
gaggccatccgccagacgttcctgcgggaacgcgagatctcccagcagggccgcgacctc
atcagcgacgacgaggaagacaactag
DBGET
integrated database retrieval system