Clupea harengus (Atlantic herring): 105892424
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Entry
105892424 CDS
T09045
Symbol
hsf4
Name
(RefSeq) heat shock factor protein 4
KO
K09417
heat shock transcription factor 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105892424 (hsf4)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
105892424 (hsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
LRRFIP
DUF2813
DUF4315
SKA1
CTD12
YscO
Motif
Other DBs
NCBI-GeneID:
105892424
NCBI-ProteinID:
XP_012674125
UniProt:
A0A6P3VK79
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Position
3:19903861..19916636
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AA seq
431 aa
AA seq
DB search
MQESPGSIGVDGGYASNVPAFLTKLWTLVEDPDTNHLICWSATGTSFHVFDQGRFAKEVL
PKYFKHNNMASFVRQLNMYGFRKVVNIEQSGLVKPERDDTEFQHLYFLQGHEHLLEHIKR
KVSIVKSEETKVRQEDLSKLLYEVQVLRSQQENMECQMQDMKQQNEVLWREVVSLRQNHN
QQQKVMSKLIQFLFSQMQSNTPNTVGMKRKLPLMLDDGSTTPPASKFSHSHPLEPLQEPF
YIQSPSTDTASCSSSSTMTGGPIISDVTEMSQPNTMAIPMQTEESREKCMMLIKEEPVSP
GVRGRGEGVALSSCEVCAEPPVLPVAMVQSVLEARGTGSGERRAKRPMMERSEVAEAVES
VDMSLEDLQMLLRSHQQSLEPSAAATAMDPFNFSLPLTEWNFTDMESNLKSYMFQTQEEE
AFSGAGCEEQQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtctcccggctcgataggtgtggacggaggatacgccagcaacgtccctgcc
tttctcaccaagctctggaccctggtggaggaccccgacaccaatcacttgatctgctgg
agtgcgactggcaccagttttcatgttttcgaccagggaaggttcgctaaagaggtgctg
cccaagtacttcaagcacaacaacatggccagcttcgtccgccagctcaacatgtatggc
ttcaggaaggtggtgaacatcgagcagagtggcctggtgaagccggagagggatgacact
gagttccagcacctctacttcctgcagggccacgaacacctgctggagcacatcaagagg
aaggtgtccattgtgaagagtgaggagactaaagttcggcaggaagacctcagcaagctg
ctctatgaggtgcaggtgctgcgcagtcaacaggagaatatggagtgccagatgcaagac
atgaagcagcagaacgaggtgctgtggagggaggtggtctcgctccggcagaaccacaat
cagcagcagaaggtcatgagcaagctgattcagttcctgttcagccagatgcaatccaat
acacccaacactgttggaatgaagagaaaactgcccctcatgttggatgacggctccacc
acccctccggcctccaagttcagccacagccaccccttggagcccctgcaggagcccttc
tacatccaatcgccatctacagacacagcctcttgctccagcagcagcacgatgacagga
ggaccaatcatatcagacgttactgagatgtcccagccaaacaccatggccataccaatg
caaacagaagagtcaagggagaagtgcatgatgctcattaaggaggagccagtgagccct
ggggtcagaggtcgtggggagggtgtggccctcagctcttgcgaggtgtgtgccgagccc
cccgtcctccccgttgccatggtgcagtctgtcctggaagcccgagggactgggtctgga
gagaggagggccaagaggccgatgatggagaggtctgaggtagctgaggctgtggagagt
gtggacatgagtctggaggacctacagatgctccttcggagtcaccagcagagcctggag
cccagtgcagcagccactgctatggatccatttaacttcagcctgcccctgaccgagtgg
aacttcacagacatggagtcaaacctgaaatcatacatgttccagacccaggaggaggag
gccttcagtggagccggctgcgaggagcagcagtaa
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