KEGG   Clupea harengus (Atlantic herring): 105892440
Entry
105892440         CDS       T09045                                 
Symbol
rab8b
Name
(RefSeq) ras-related protein Rab-8B
  KO
K07902  Ras-related protein Rab-8B
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105892440 (rab8b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105892440 (rab8b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105892440 (rab8b)
   04031 GTP-binding proteins [BR:char04031]
    105892440 (rab8b)
Membrane trafficking [BR:char04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    105892440 (rab8b)
 Autophagy
  Xenophagy
   Other xenophagy associated proteins
    105892440 (rab8b)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105892440 (rab8b)
  Exosomal proteins of other body fluids (saliva and urine)
   105892440 (rab8b)
  Exosomal proteins of colorectal cancer cells
   105892440 (rab8b)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    105892440 (rab8b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB RsgA_GTPase Septin AAA_24 PduV-EutP DUF3963 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 105892440
NCBI-ProteinID: XP_012674151
Ensembl: ENSCHAG00000010155
UniProt: A0A6P3VKT6
LinkDB
Position
3:18574565..18589820
AA seq 207 aa
MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDITSDKSFENIKNWIRNIEEHASSDVERMILG
NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSLNVEEAFFTLAKDIMARLNRKMNDG
SQAEGGGPVKITENKSKKHSFFRCTLL
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcgaaaacgtacgactatctttttaaacttttgctcataggagacagcggagttggg
aagacatgtctgctgttcaggttcagcgaagacgcctttaatactaccttcatatcaacg
atcggaatcgacttcaaaatcagaacgatcgagctcaatggcaagaagatcaagctgcag
atatgggacacggcaggacaggagagatttaggaccatcaccaccgcatactacagagga
gccatgggcattatgctggtgtatgacatcacgagtgataagtccttcgagaacatcaag
aactggattcggaatattgaagagcatgcatcatcagatgtcgagaggatgatcctcggg
aacaagtgtgacatgaatgacaagagacaggtgtccaaagagaggggagagaagttggcg
atagactatgggatcaagtttttggaaacaagtgcaaaatccagtctaaatgttgaagag
gcttttttcacactggccaaagacatcatggctcgactcaacagaaaaatgaacgatggc
tctcaggctgaagggggtggtccagtgaaaatcacggagaacaagtccaagaagcacagc
ttcttcagatgtaccctcttgtga

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