Clupea harengus (Atlantic herring): 105892496
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Entry
105892496 CDS
T09045
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105892496 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105892496 (arih1)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105892496 (arih1)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105892496 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
105892496
NCBI-ProteinID:
XP_031420679
UniProt:
A0A6P8F6M6
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All DBs
Position
3:complement(17992520..18013127)
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AA seq
530 aa
AA seq
DB search
MDSDEGYNYEYDDDEECSEDSAEEDLEDDNLELGDVELVDPVVAGGERDECGETGGSGLG
PGQDEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFD
GNLDKLFSECHVINPSRKSRTRPVNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQC
WGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNR
LLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDS
ETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNR
YNEDDAKAARDAQEVTQSRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQ
HNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSG
YLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggttataactatgaatacgacgacgacgaggaatgtagcgaggat
agcgccgaagaggatcttgaagacgacaacctggagctgggggatgtggagctagtcgat
ccagttgtggccggtggtgaacgagatgaatgtggagaaactgggggaagcggcctcggg
cctggtcaagatgaagaggactaccgattcgaagtactcactgccgaacagatcctccaa
catatggtggagtgtatcagggaggtcaacgaggtcatacagaatccagcaacaataact
aggatacttcttagtcacttcaactgggacaaggagaagctgatggaaagatactttgat
ggtaacctggacaagctgttctcggagtgccatgtgatcaaccccagtaggaagtcccgg
acgcgcccggtgaacacgcgctcgtccgcacaggacatgccatgccagatctgctatctc
aactaccccaactcgtacttcacaggcctggagtgcggtcacaagttctgcatgcagtgc
tggggcgactacctaaccaccaaaatcatcgaggagggaatgggacagactatttcctgt
ccagcacatagctgcgatatcctggtggatgacaacacagtcatgaggttgatcacagac
tcgaaagtcaagttgaagtaccagcacttaattaccaatagttttgtagagtgcaaccga
ctgttaaaatggtgcccagctccagactgccaccacgtggtcaaagtccagtaccccgat
gccaagcccgtcaggtgcaagtgtggtcggcagttctgcttcaactgtggagaaaactgg
cacgaccctgtcaaatgcaagtggctgaggaaatggatcaaaaagtgtgacgatgacagc
gaaacctcaaactggatcgctgcaaataccaaggaatgtcccaagtgtcatgtcaccata
gagaaggacggcggctgcaaccacatggtgtgccggaaccagaactgcaaagcagagttc
tgctgggtctgccttggaccctgggagccccatggctcagcctggtacaactgtaaccgt
tacaatgaggatgatgcgaaggctgcgagggacgcgcaggaggtgactcagtcgcgttct
cgggcggcgctgcagcggtacctgttctactgcaaccgctacatgaaccacatgcagagc
ctgcgcttcgagcacaagctctacgcccaggtcaagcagaagatggaggagatgcagcag
cacaacatgtcctggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgccag
tgccgctccacgctcatgttcacctacgtcttcgccttctacctcaagaagaacaaccag
tccatcatctttgagaataaccaggcagacctggagaatgccacagaagtactgtctgga
tacctggagcgagacatttcccaggattccctgcaggacatcaagcagaaagtacaagac
aagtacagatactgtgagagcagacggcgagtgctcctgcagcacgtgcatgaaggctat
gagaaggacctgtgggagtacatcgaggattga
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