Clupea harengus (Atlantic herring): 105892511
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Entry
105892511 CDS
T09045
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
105892511 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892511 (man2c1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
105892511 (man2c1)
Membrane trafficking [BR:
char04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
105892511 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
105892511
NCBI-ProteinID:
XP_012674234
Ensembl:
ENSCHAG00000005362
UniProt:
A0A6P3VKY8
LinkDB
All DBs
Position
3:complement(18227004..18250019)
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AA seq
1027 aa
AA seq
DB search
MYHQPVLKHRRTLLERAEKFTSDIYFTDCNLRGRLYGDTCSLDSLSSFLSPKRITFSEAV
KHTFQPYTVGDSFGPTWWTCWFRVSLKVPDSWRGKEVHLRWESDGEGMVWKDGEPVQGLT
KEGEKTSYILTECLQDNKPQSVTFYVELACNGLFGAGLGSMIAAPDPNKKFSVQKAELVV
FNRDVRELLTDFEMLVDIVKLLGEGEQRGFQALFTANEMVNLCDPANPSTFAAARSLAQK
FFKQRNGESQHIVHAMGHCHIDSAWLWPYEESIRKCGRSWVTVIRLMEKNPDFIFTCSQA
QQFHWVKEWYPGLYSQIQRFVQKGRFIPVGGTWVEMDGNLPSGESMVRQFLEGQNFFKAE
FGNYCKEFWLPDTFGYSAQLPQLMQGSGITRFLTQKLSWNLVNTFPHNTFFWEGIDGSQV
LTHFPPGNSYEMKGKVEDLVNTLKNNKDKGRANHSAALFGFGDGGGGPTQLMLDRLERVA
DTDGLPKVRMSSPDDLFTALEGDSGLLCTWTGELFLELHNGTYTTQAKIKLGNRQCEALL
HDVEVASCLALCHNKAFSYPAAKLQEIWRLLLLNQFHDVLPGSCTEMVVDDALEYYKEVQ
STGTRLLQEACGALISGGQEGACPAVLNTLAWERTEVIQLEEDTVPPKLALARVPSVGLA
VVQESAKPSCPVTVTTQADCTVLMENGILRAVLDQKGCLVSLSLVNTNREAIADGCLGNQ
FVVFDDVPLYWDAWDVMDYHLQTRRPVVEVMKPAAVTSSGGLRGSVCFSLRVSGKSTITQ
EVILDADCPYLKFSTQVEWAESHKFLKVEFPVRVRSPDATYEIQFGHLQRPTHRNTSWDW
ARFEVWGHRWADLSEHGFGVAVLNDCKYGYSCFQNTLTLSLLRAPKAPDLHADMGSHRFT
YALMPHMGCFQDASVIQCAYNLNHPLRLVPNASNLQLLSAFSVSADGVILETIKQAEFQK
NALVVRLYESHGGSTSVTLSTPLPLREAWHCDLLERPDPKHRADITASGISLHFSPFQIR
SLLLILE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaccaacccgtcctaaagcacaggaggacacttcttgagcgtgcagagaagttc
acatctgatatttatttcacggactgcaatctcagaggaaggctttacggagacacctgt
tcgctggactcgctttcttccttcctgtctcctaagcgcattaccttctcagaggccgtc
aaacacaccttccaaccatatactgttggagatagctttggacccacgtggtggacatgc
tggttcagggtgtctctgaaggtccccgactcatggagaggaaaggaggtgcacctcagg
tgggagagtgatggagaggggatggtctggaaggacggggagccagtccaggggctgaca
aaagagggtgagaagacatcttacatactgacagagtgtctccaggacaacaagccccaa
agcgtgactttctatgtggaactggcctgcaacggcctctttggagctggtttggggtcc
atgatcgcagctccagaccccaacaagaagttctctgtgcagaaggccgagctagttgtg
ttcaaccgtgatgtcagagagctcctgacagactttgagatgcttgtggacattgttaag
ttgctaggtgagggggagcagcgagggttccaggccttgttcacggccaatgagatggtg
aatctctgcgatccagctaaccccagcacgttcgctgcggcccgaagcctggcacagaaa
ttcttcaagcagagaaacggggagagtcagcacatcgtccatgccatgggccactgtcac
atagattcagcttggctgtggccctacgaggagtccatcaggaagtgcggacgcagctgg
gtcactgtgattcgcctcatggagaagaaccctgacttcatctttacctgttcccaggcc
cagcagtttcattgggtgaaggagtggtacccagggttgtactctcagatccagcgtttt
gtccagaagggccgctttatcccagtgggtggaacatgggtggagatggatggaaacttg
ccatctggcgaatccatggtcagacagttcctggaaggccagaacttcttcaaggccgag
ttcgggaactactgcaaagagttctggttacccgacacatttggctactccgcccagctg
ccccagctgatgcagggcagtggcatcacccgttttctgacccagaagctgagctggaac
ctggtcaacacctttcctcacaacaccttcttctgggagggtatagacggctcgcaggtt
ctcactcactttcctccggggaactcctacgagatgaagggcaaggtggaggatctggtg
aacacgctgaagaacaacaaggacaaagggcgagccaatcacagtgctgcactctttggt
tttggagacggaggaggtggtccaacccagcttatgctggacagactggagcgtgtggcg
gacacagatggactgcccaaggttcggatgtcgagcccagatgacctcttcacagcgctg
gagggtgactccggcctcttgtgcacgtggacgggagagctcttcctggaactgcacaac
ggcacctacaccacccaggctaagatcaaactggggaaccgtcagtgcgaggctctgctc
catgatgttgaggtggccagttgtcttgccctgtgtcacaacaaggctttctcataccct
gctgccaaactgcaagagatctggaggctgctgcttctcaaccagttccacgatgttctt
cctggcagctgcacagaaatggtggtggatgatgctctggagtattacaaggaggtccag
tccactggcaccagactgctgcaggaggcttgtggggccctgatttcgggtggccaggaa
ggtgcctgtcctgcagtgctgaacacgttggcttgggagcgcactgaggtcatacaactg
gaagaggacaccgtgccaccaaagctggctctggctagagtacctagtgtgggtttggct
gtagtccaggagtctgcaaagcccagttgtccagtaacagttacaacacaagccgactgt
actgtcctgatggagaatgggattttgcgcgcagtcctggaccagaagggctgtttagtt
tctcttagtcttgtgaacacaaatagggaagccattgccgacggttgtcttggaaaccag
tttgtggtgtttgatgacgtgcctctgtactgggacgcctgggatgtgatggattaccac
cttcaaacaaggaggccggtggtggaggtgatgaagccggctgcggtgacgagctccggg
ggcctgcgaggaagcgtctgcttctccctcagggtcagcggcaagagcaccatcactcag
gaggtcattctggatgctgactgtccttatctcaagttcagcactcaggttgagtgggcc
gagagccataagttcctgaaggtggaattcccagtgcgggtgcgaagtcccgacgccacc
tatgagatccagtttgggcacctgcagaggcccacgcacaggaacacgtcctgggactgg
gcccgctttgaggtgtggggccatagatgggcagacctgtcggagcatggctttggagtg
gcggtgctaaacgactgcaagtacggctactcctgcttccagaacacgctcaccctgtcc
ttactccgagcccccaaagctccggatctccatgctgatatgggcagtcaccggttcacc
tacgccctcatgcctcacatggggtgtttccaggacgcgtctgtcatccagtgtgcctat
aatctcaaccatcctcttcggctggtgccaaacgcctccaaccttcaactcttgagtgcg
ttctccgtcagcgctgatggggtcatcctcgaaaccatcaaacaggcggagttccagaag
aatgctctggttgttcgcctgtatgaatcgcatgggggcagcacctctgtgacgctctcc
acccctctgcccctgcgtgaagcctggcactgtgatcttctggagcgcccggacccgaaa
cacagagcggacattacagcgtctggaatctctctccacttcagtcccttccagatcaga
tctctcctgctaatccttgaatga
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integrated database retrieval system
