KEGG   Clupea harengus (Atlantic herring): 105892513
Entry
105892513         CDS       T09045                                 
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
  KO
K10567  endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105892513 (neil1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105892513 (neil1)
Enzymes [BR:char01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     105892513 (neil1)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     105892513 (neil1)
SSDB
Motif
Pfam: Neil1-DNA_bind Fapy_DNA_glyco H2TH DUF789
Other DBs
NCBI-GeneID: 105892513
NCBI-ProteinID: XP_012674237
Ensembl: ENSCHAG00000005274
UniProt: A0A6P3VJY4
LinkDB
Position
3:18221878..18226933
AA seq 461 aa
MPEGPELHMASLFVNRMCEGVVFSGAVEKSEVSKSPDVPFACDAYRVRAASRGKEVRLTL
TPIKSDETPKMAGAKADQNLEPMDVVFRFGMSGFFRFTPENELPKHAHLRFYTPEEPRRV
LSYVDVRRFGSWHPNGTWQPDRGPCIMFEYESFRENVLSNLSDKAFDRPICETLLNQKFF
NGIGNYLRAEILYRLDIPPFMKARTVLEGLRSQSMEDDKAAVQEELEAKPGTKSEDDSGP
DLLSLCHTVPLEVLKMGGKGYDPEKKDYSVFKSWLQCYYVDGMQSLRDHNGRTMWFKGDP
GPMAPKALKSPKAKKRVKKEEHDYTETKKGGKKKSTKEKVAKAAKGTKKPTVERKVAQRR
SASKRSRSTQKEEEEEEEEEEEEEVYLFKENAKPKGRRKSSTSVAQRKSSGPKRTRGAQS
GHEEAETAQTNKRGMRRKSISTAEPQRRSGRATRGSVRQTS
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgccagagggtccggagctgcacatggccagcctgttcgtgaacaggatgtgtgagggt
gtggtgttctccggcgctgtggagaaatccgaggtcagtaaaagccctgacgtgcctttt
gcctgcgacgcgtacagagtgcgtgccgcctccaggggcaaggaggtgcgactcaccctc
acgcccatcaagagcgacgagacccccaaaatggccggggccaaggcagaccaaaaccta
gagcccatggacgtagttttccgcttcgggatgtccgggttcttccgtttcacccccgag
aacgagctccccaagcatgcccaccttcggttctacacccccgaagaacctcgccgggtg
ctgagctatgtggatgtgcgcaggtttggaagctggcatcctaacggcacctggcaaccc
gaccggggtccatgcatcatgtttgagtatgagagcttcagggaaaacgttttgtctaac
ctctcggacaaggcctttgacagacccatctgtgaaacgctgctgaaccagaagttcttc
aatggaatcggcaactatctccgagcagagatactgtacagactggacatcccaccattc
atgaaggccaggactgttctggaaggtctgaggtcacaaagcatggaagatgataaggca
gcggtgcaggaggagttagaagccaagccgggaacaaagagcgaggacgacagtggtcct
gaccttctcagtctgtgtcatactgtccctctggaagttttgaaaatgggaggtaaaggc
tacgatccggagaagaaagattattccgtctttaaatcctggctgcagtgttactatgtc
gacgggatgcagtctctgagagaccataatggcagaaccatgtggttcaagggagatcct
ggccccatggctccgaaagctttgaaatcccctaaagccaagaagcgggtgaagaaagag
gaacatgactacacggagacaaaaaagggaggcaaaaagaaaagcacaaaagagaaagta
gcaaaggcagccaaaggcacaaagaaacccacggtggagcggaaggttgctcagagacgg
agcgcttcgaagcggtccagaagtactcagaaggaggaggaggaggaggaggaggaagag
gaggaggaggaagtatatctcttcaaagaaaacgccaaacctaaagggcgcagaaagagc
agcacaagtgtggcccagaggaagtctagtggacccaaacggaccagaggcgcccagagt
ggacatgaggaagcagagactgcacagaccaacaagagaggaatgaggaggaagagcatc
tctactgctgagccgcagagaagaagtgggagagcaaccagagggagtgtgagacagacc
agctag

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