Clupea harengus (Atlantic herring): 105892513
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Entry
105892513 CDS
T09045
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105892513 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105892513 (neil1)
Enzymes [BR:
char01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105892513 (neil1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105892513 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
DUF789
Motif
Other DBs
NCBI-GeneID:
105892513
NCBI-ProteinID:
XP_012674237
Ensembl:
ENSCHAG00000005274
UniProt:
A0A6P3VJY4
LinkDB
All DBs
Position
3:18221878..18226933
Genome browser
AA seq
461 aa
AA seq
DB search
MPEGPELHMASLFVNRMCEGVVFSGAVEKSEVSKSPDVPFACDAYRVRAASRGKEVRLTL
TPIKSDETPKMAGAKADQNLEPMDVVFRFGMSGFFRFTPENELPKHAHLRFYTPEEPRRV
LSYVDVRRFGSWHPNGTWQPDRGPCIMFEYESFRENVLSNLSDKAFDRPICETLLNQKFF
NGIGNYLRAEILYRLDIPPFMKARTVLEGLRSQSMEDDKAAVQEELEAKPGTKSEDDSGP
DLLSLCHTVPLEVLKMGGKGYDPEKKDYSVFKSWLQCYYVDGMQSLRDHNGRTMWFKGDP
GPMAPKALKSPKAKKRVKKEEHDYTETKKGGKKKSTKEKVAKAAKGTKKPTVERKVAQRR
SASKRSRSTQKEEEEEEEEEEEEEVYLFKENAKPKGRRKSSTSVAQRKSSGPKRTRGAQS
GHEEAETAQTNKRGMRRKSISTAEPQRRSGRATRGSVRQTS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggtccggagctgcacatggccagcctgttcgtgaacaggatgtgtgagggt
gtggtgttctccggcgctgtggagaaatccgaggtcagtaaaagccctgacgtgcctttt
gcctgcgacgcgtacagagtgcgtgccgcctccaggggcaaggaggtgcgactcaccctc
acgcccatcaagagcgacgagacccccaaaatggccggggccaaggcagaccaaaaccta
gagcccatggacgtagttttccgcttcgggatgtccgggttcttccgtttcacccccgag
aacgagctccccaagcatgcccaccttcggttctacacccccgaagaacctcgccgggtg
ctgagctatgtggatgtgcgcaggtttggaagctggcatcctaacggcacctggcaaccc
gaccggggtccatgcatcatgtttgagtatgagagcttcagggaaaacgttttgtctaac
ctctcggacaaggcctttgacagacccatctgtgaaacgctgctgaaccagaagttcttc
aatggaatcggcaactatctccgagcagagatactgtacagactggacatcccaccattc
atgaaggccaggactgttctggaaggtctgaggtcacaaagcatggaagatgataaggca
gcggtgcaggaggagttagaagccaagccgggaacaaagagcgaggacgacagtggtcct
gaccttctcagtctgtgtcatactgtccctctggaagttttgaaaatgggaggtaaaggc
tacgatccggagaagaaagattattccgtctttaaatcctggctgcagtgttactatgtc
gacgggatgcagtctctgagagaccataatggcagaaccatgtggttcaagggagatcct
ggccccatggctccgaaagctttgaaatcccctaaagccaagaagcgggtgaagaaagag
gaacatgactacacggagacaaaaaagggaggcaaaaagaaaagcacaaaagagaaagta
gcaaaggcagccaaaggcacaaagaaacccacggtggagcggaaggttgctcagagacgg
agcgcttcgaagcggtccagaagtactcagaaggaggaggaggaggaggaggaggaagag
gaggaggaggaagtatatctcttcaaagaaaacgccaaacctaaagggcgcagaaagagc
agcacaagtgtggcccagaggaagtctagtggacccaaacggaccagaggcgcccagagt
ggacatgaggaagcagagactgcacagaccaacaagagaggaatgaggaggaagagcatc
tctactgctgagccgcagagaagaagtgggagagcaaccagagggagtgtgagacagacc
agctag
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