Clupea harengus (Atlantic herring): 105892596
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Entry
105892596 CDS
T09045
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105892596 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105892596 (herc3)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105892596 (herc3)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
105892596 (herc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
105892596
NCBI-ProteinID:
XP_012674344
Ensembl:
ENSCHAG00000007052
UniProt:
A0A6P3VLK4
LinkDB
All DBs
Position
22:complement(21512616..21546370)
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AA seq
1048 aa
AA seq
DB search
MMLCWGSASSGQLGGGEPESSVLEPRTCRVFSGRALREVACGGYHSLFLLHDGSVYTCGS
NCSGQLGHEKAGSTPELVGALDAQKIAGVSCGSAHSLAVNEQGQVFAWGAGGEGQLGLGM
AEQVVRVPRLIKKLCEHRITQVMCGNRHCIALSKDGQIFTWGQNSNGQLGLGKGESSTLS
PQPLKSLVGIPLSQISAGGDHSFALSLSGAVFGWGKNSTGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKDGGLFTFGSGSRGQLGHDSINNEPLPRRVLELMGTEVSQIA
CGRHHTLAFVPSSSLVYAFGCNADGQLGIGATTDIMSPFPLRSVPPSCIARIQSSDPEQF
VIRKIYCGGDHNFLLYGNDEDSAVPEDFRMINTSRSISLINYESLNMLRLKLSDSADSSI
TNDAILLLSSTACWNASFLDQSDDGHFKTNPKIPGIDLNSVRLLFDMLMKPDFSRLLEQA
TKSFESLLIPQLPVSPPDVEAMRIYLILYECPALQDSKNYISLTIPLAMAILRLDANPSK
VLDNWWSLVDGEVFSRLVEMYKSIVVFLLTGGKALLIPAFLESYISATLRLLEKLHKVNL
KAQHVEYNCFYIPDITSLVDIQEDYLKWFLSKAEIKMRTPAVQNSVTLCAYPFILNAKAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPLLARNPFLVLHVRRDHLVSDALRELTVY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYPESNLLWFSDKCF
VEHNWFHLIGIICGLAIYNSTVVDLHFPMVLYKKLLDVFPTLQDLKELSPTEGRSLQQLV
DYEGDDIQETFCLNFAITREYYGLTEVKELVPGGEGIMVDKSNRMEFVSAYLRYVFVDSV
QELYAAFSSGFLKVCGGKILSLFQPCELMAMVVGNCNYNWEEMEKNAVYKGEYSPSHPTV
RMFWEVFHEFPLEKKKKFLLFLTGSDRIPIHGMASLHIAIQSTSADEHYLPVAHTCYNLL
DMPCYRTKETLCRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgatgctatgttggggtagtgcgtcttctggacagcttggtggtggggagccggagagt
tcggtcctagagccacggacctgtcgggtgtttagcgggagggccctgagggaggtggcc
tgtggggggtatcactcgcttttcctgttgcatgatgggagtgtgtacacatgtggctcc
aactgcagtggacagctgggccacgagaaggccggaagcacgccagagctggtgggggct
ctggatgctcagaagattgctggcgtgtcgtgcggctctgcccactcgctggcagtgaat
gagcagggccaagtatttgcctggggggccggcggtgagggccagctggggctgggcatg
gcagagcaggtcgtcagagtgcctaggttgatcaagaagctgtgcgagcatcggatcaca
caggtgatgtgtggcaaccggcactgcattgcactttccaaagacgggcagatattcacg
tggggccagaactccaacggtcagctgggtctggggaagggggagtccagcaccctgtcc
ccccaacccctcaagtctctggtggggatccccctgtctcagatcagtgctggaggagac
cacagctttgccctgtccctctcaggggccgtgtttggctggggcaaaaacagcactggc
cagctgggcctgaatgatgagcaagatcgtgccgtcccttgccacataaagttcctcaga
tcccagaaagtagtgtacatcagctgtggagaagagcatacagctgcattgacaaaggac
ggaggtttgttcacatttggaagtggttccaggggccagctgggccacgactccatcaac
aacgagcccctcccccgcagagtccttgagctcatgggcacagaggtgtcccagattgcc
tgtggcaggcaccacaccctggcatttgtgccctcgtccagcctggtgtacgcctttggc
tgcaacgctgatggccagctgggcatcggtgccacgactgacatcatgagcccgtttcct
ctccgcagcgtccctccctcctgcatagccaggatacagtcctcagatccggagcagttc
gtcattaggaaaatctactgcgggggagaccataacttcctgttgtatggcaacgatgaa
gactctgcagtcccggaagacttccgcatgatcaacacttccaggagcatctcgctaatt
aattatgagagcctgaacatgctgagactgaagctgtctgacagcgcagactccagcata
accaacgatgccattctactgctctcatccactgcatgttggaacgccagctttctggac
caaagcgatgatggccacttcaaaaccaaccccaaaatcccaggcatcgacctcaactct
gtgcggctactgtttgacatgctcatgaagccagacttctctagactgttggagcaggcc
accaagagctttgagagcctgctgatccctcagctgcccgtctctcctccagatgtggag
gccatgcgcatctacctgatcctgtacgagtgccccgctctgcaggactcaaaaaactac
atctccctcaccatccctctcgccatggccatcctcaggctcgacgccaaccccagtaaa
gtgctagataactggtggtcgctggtggacggtgaggtcttctccaggctggtggaaatg
tacaagagcatagtggtgttcctgctgacaggagggaaagcccttctcatccctgcattt
ctggagagttacattagcgctacgctaagactcctggaaaaactccacaaggtgaacctg
aaagctcagcatgtggagtataattgtttctacatccctgacatcaccagcctggtggac
atccaggaggactacctcaagtggtttttgagcaaagctgagattaaaatgaggacccct
gcagtacagaactctgtgaccctctgtgcctacccgttcatattgaacgctaaagccaag
acaaccatgctgcaaacggacgcagagctgcaaatgcagatggcggtgagcggtgccaac
ctgcacaacgtcttcatgctgctgacgctggagcccctgctggcacgcaaccccttcctg
gtgctgcacgtccgccgcgaccacctggtcagcgacgcgctgcgagagctcaccgtctac
tctgacgtcgacctcaagaagcccctaaaggtgatctttgatggggaggaggctgtggat
gcgggaggagtcaccaaggagttcttcctgctgctgttgaaggagctgatggacccggtc
tatggcatgttcacgcactaccccgagtccaacctgctctggttctctgacaagtgtttt
gttgagcacaactggttccatttgatcgggattatctgcggcctggccatctacaactcc
acggtggtggacctgcacttcccaatggtgctctacaagaagcttctagacgttttcccc
acccttcaggacctgaaggaactgtctcctactgagggcaggagtctccagcagcttgtg
gactatgagggagatgacattcaggagaccttctgtctgaactttgcgatcaccagggag
tattatgggctgacagaggtcaaagagctggttccaggaggagagggcatcatggtggac
aagtccaacagaatggagtttgtgtctgcgtacctgcgctacgtgtttgtggactcggtg
caggagctctacgcagccttctccagtggcttcctgaaggtgtgtggggggaagatcctc
tccctctttcagccctgcgagctcatggccatggtagtgggcaactgcaattacaactgg
gaggagatggagaagaatgctgtttataagggcgagtactcgccgtcccacccaaccgtg
cgcatgttctgggaggtgttccacgagtttccactggagaagaaaaagaagttcttattg
ttcctgactggcagcgaccgtatccccatccacggcatggccagcctgcacatcgccatc
cagtccacctcggccgacgagcactacctgccggtggcacacacctgctacaacctgctg
gacatgccctgctaccgcaccaaagaaacgctgtgccgtcgcctcacccaggccgtggag
cagtacgagggcttcagcctggtgtga
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