Clupea harengus (Atlantic herring): 105892601
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Entry
105892601 CDS
T09045
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00061
Fatty acid biosynthesis
char00071
Fatty acid degradation
char01100
Metabolic pathways
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04146
Peroxisome
char04216
Ferroptosis
char04920
Adipocytokine signaling pathway
Module
char_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105892601 (acsl1a)
00071 Fatty acid degradation
105892601 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105892601 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
105892601 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105892601 (acsl1a)
03320 PPAR signaling pathway
105892601 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
105892601 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105892601 (acsl1a)
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105892601 (acsl1a)
Lipid biosynthesis proteins [BR:
char01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105892601 (acsl1a)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of breast milk
105892601 (acsl1a)
Exosomal proteins of breast cancer cells
105892601 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105892601
NCBI-ProteinID:
XP_012674350
Ensembl:
ENSCHAG00000019812
UniProt:
A0A6P3VK44
LinkDB
All DBs
Position
22:20806831..20837993
Genome browser
AA seq
698 aa
AA seq
DB search
MQAQDLLRQLRMPEISDVREYVRSLPTNTLMGMGALAAVTTYWYATRPTALKPPCDLTMQ
SIEVPGDEYVRRSVLLDEGKELMTYFYDDARTMYEVFTRGVRVSNDGPCLGSRKPNQPYE
WLSYKEVQDMAENIGSALLHRGQSQSGDKYVGIFAQNRPEWTISELACHTYSLVAVPLYD
TLGTEAIDYILEKASISTVICDVADKVRLILDCVSNRKHTVRTIALMDAFDSELVARAQT
CGIEILSLKDLEALGKAHHTTPQPPKPEDLALICFTSGTTGNPKGAMLTHGNVVANCAAF
IRVTEGVLRPCCQDILISFLPLAHMFERVVEGVILIHGARIGYFQGDIRLLMDDLKTLRP
TVFPVVPRLLNRMFDKIFGQANTPLKRWLLDFASRRKEAEMKSGVVRKDSMWDTLIFSKV
QASLGNRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCSMSLPGDWTAGHV
GAPLPCNLIKLVDVADMNYLSANGEGEVCVKGANVFQGYLKDPEKTAEAIDKDGWLHTGD
IGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYNRSDPVAQIFVYGESLQACLVGV
VVPDPDFLPGWAKKKGIEGSYTEMCKSKDLKNAILEDLIRLGKEGGLKSFEQVRDIVLHP
QMFSVQNGLLTPTLKAKRTELKNHFREQIDQLYARIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggatctcctgagacagctgcggatgcccgagatcagtgacgtgcgggag
tatgtgcgcagcttgcccaccaacacgctcatgggcatgggagccctggcggctgtcacc
acctactggtacgccacgcggcccacagccctcaagccaccctgtgacctcaccatgcag
tccatcgaggtgccgggagatgagtatgtcagacgctctgttctgttggacgagggcaaa
gaattgatgacttatttctatgatgacgcacgcactatgtatgaagtgttcacacgagga
gtgcgggtgtccaacgatgggccttgccttggctccaggaaacccaaccagccttatgaa
tggctgtcctataaggaggtacaagacatggccgagaacataggctccgccctcctccac
agaggccaatcgcagagtggggacaaatacgtcggtatctttgcccagaaccggccagag
tggacaatttccgagctggcatgtcacacatactccttggtggccgtccccctatatgac
acactgggcacagaggctattgactacatcctcgagaaggcttccatctcgacagtgatc
tgtgatgtggcagacaaggtgcgactgatcctggactgcgtgtcaaaccgtaagcacacc
gtccgcaccatcgccctaatggatgccttcgacagtgagttggtggcccgtgcacagacc
tgtggcattgagatcctcagcctcaaggacctagaggcactaggcaaggcccaccatacg
acgcctcagccccctaaaccagaggatctggctttaatctgcttcaccagtggaactaca
ggaaacccaaagggcgccatgctcacgcacggaaacgtggtggccaactgcgccgctttc
atcagagtaacagagggagtattgaggccctgctgtcaggacattctcatctccttcctg
cccctggctcacatgtttgagagggtggtggagggagtcatcctcatccacggggctcgg
atcggctactttcagggggacattcggctgctgatggacgacctgaagaccctgcggcca
accgtcttccctgtagtgccccgtctgctcaaccggatgtttgataagatatttgggcag
gccaacactccactgaagaggtggctgctggactttgcctccaggaggaaggaggcagag
atgaagagcggagtggtcaggaaagacagcatgtgggatacgctcatcttcagcaaagta
caggccagtctgggaaatcgtgtgcgactcatgatcactggagctgctccggtctctccc
acggtcctcactttcctgcgtgccgccctcgggtgccagttctatgaaggttatggccag
actgaatgcactgcaggttgttctatgtccctgcctggtgactggacagcaggtcatgtg
ggtgcacctctgccttgcaacctaattaagctagtggatgttgctgatatgaactaccta
tcagccaatggagaaggagaggtgtgtgttaaaggagcaaacgtgttccagggttacctg
aaagacccagagaagactgcagaggccatagataaagatggctggcttcatacaggcgac
attggcaaatggctaccgaatggtaccctgaaaatcatcgaccggaagaagcacatcttt
aaactggcccagggggagtacatcgcccctgagaagatcgaaaacatctacaaccgcagc
gaccctgtggcccagatatttgtctacggagagagtctgcaggcctgtcttgtgggcgtt
gtggtgccagatcctgattttctgcctggatgggcaaaaaagaagggtatcgagggctca
tacactgagatgtgcaaaagcaaggatctgaagaacgccatactggaagacctcatccga
ctgggcaaagagggtggccttaagtcctttgagcaggtgagggacattgtgctgcacccc
cagatgttctctgtgcaaaacggcctgctgaccccgacactgaaggccaagaggacggag
ttgaagaaccactttagagagcagatcgaccaactctacgcccgcattaaaatgtga
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