Clupea harengus (Atlantic herring): 105892794
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Entry
105892794 CDS
T09045
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105892794 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892794 (sec24c)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105892794 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
105892794
NCBI-ProteinID:
XP_031416431
Ensembl:
ENSCHAG00000015829
UniProt:
A0A6P8EWG4
LinkDB
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Position
23:16395248..16427691
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AA seq
1295 aa
AA seq
DB search
MNVNQQPHMASPYGPSQPGYQGYPQAPHGGQHMAGGYPGQYPPYNGPTSAYQPGAPVPGP
MCAPPTSGAPPISAPQAYGQYGGGQALNGPPPSAAPTQRPPVSQPYTPAPMNLSTPQSSY
SQPFAGPPTSMQQMTNQMAGMQVGPAPPAGTAPGYAMPPNSQPPVSGTYTSTASHPSFPP
TSIASPHPAAGDGVPPGPPQSYYGGPPHAQQPFPTSSAPPPAFSTASATPPAAAAPAPAV
SQASQAFPGGPPHAQPQPPPQQQQQLPPFSAAGPTPPQQTPFSSGAPQAAPHPASQHLYG
GPPPPQGAPQQQQQAGFPRPSPPTSQPSSSTTAAATTNSGFPGGPPQSSHPYPGVTMPQQ
QHSPFHSAPQLSGPLPPPPAAGGFPPQGSAPGMQGPPLQHPSMSGPPMSQANHVAPGSTQ
PGMPPPMGPATGGMPGPPTQPGMQGYPPQQNGAFGQMRAPQPGYPGPYPGQHPGQHPGQQ
NFGAPPQAPASAPPAQKRLDPDSIPSPQAPDMPPVQKTRHRIDPDAIPSPIQVIEDDRVN
KSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFVRCTAYNVPCTSDMAKQSQVPLAAII
KPLATLPPDETPPYIVDHGESGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPN
YFQHLDHTGKRVDCYDRPELSMGSYEFLATVDYCKNNKLPQPPAFIFLIDVSYNAVRSGM
VGIVCQELKTLLDYLPRENPDVPSAVRVGFVTYNKVLHFYNVKASLAQPQMMVVSDVADM
FVPLLDGFLVNVNESRVVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKL
FVFHTSLPIAEAPGKLKNREDKKQVGTDKEKALFQPQVSFYSNLAKECVAQGCCVDLFLF
PNQYVDVATLGVVPTSTGGSIYKYTYFQAQSDQERFLHDLRRDVQKPMGFDAVMRVRTST
GIRATDFFGSFYMSNTTDVELAGLDCDKTITVEFRHDDKLSEDTGALMQCAVLYTSCCGQ
RRLRVHNMAVNCCAQLADLYRNCETDTIINFFAKYAYRSMLNSPTKNVRDILVNQCAQIL
ACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLHPAADTSLDDRAYLRQLLSCMD
ASESHVFFYPRLLPLHKMDTESDALPLAIRNSEERLSKGGLYLLETGLNLFLWVGASAQQ
ELLQNVFGTTAFGQIDPNMTCLPELDNPFSKKLRDIISAFRDQRSRYMKLMVVKQDDKLE
LIFKHFLVEDKNNSGGASYVDFLCHMHKEIRQLLS
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaccagcaacctcacatggcctccccctacggcccttctcagcccggttac
cagggctatccgcaggctcctcatgggggccagcacatggcagggggatacccagggcag
tatcccccgtacaacgggcccacctccgcctaccagcctggagccccggttccaggtccg
atgtgcgctccccccacttcaggcgctccgcccatctcggccccccaggcttacggacag
tatggtgggggtcaggcactgaacggccctccccccagtgcagccccgacccagagacca
cctgtctctcagccctacaccccagcgcccatgaacctgtccaccccccaatccagttac
agccagccattcgccggtccccccacaagcatgcagcagatgaccaatcagatggcgggg
atgcaggttgggcccgcccctcccgcaggaacagcccctggttacgccatgcctccaaat
tcccagcctcccgtctccggcacctacacatccacagcgtcccatccctccttccccccc
acctccattgcctccccccaccctgccgccggagacggagtcccccctggacccccccag
tcctactatgggggtcccccgcacgcccagcagcccttccccacctcctccgcacctcct
ccggccttctcgactgcatccgccacacctccggctgctgccgccccagctccagccgtc
tcccaggcttcccaggccttcccaggagggcctccacatgctcagccccagccgccaccg
cagcaacagcagcagctgcctcccttctcagctgctgggcccacaccccctcagcaaacc
cccttctcctctggggctccccaagcagcaccacatcccgcatcccagcacctgtatgga
ggcccaccacctccccagggtgctccccagcagcagcagcaggctggcttccctaggcct
tcacctcccacttcacagccttcatcctccacgaccgccgccgccaccaccaactctggc
ttccctggaggtccccctcagtcctcccatccgtacccgggcgtcaccatgccccaacaa
cagcactcccccttccactcggccccgcagctctccgggcccctgcctcctccgcccgct
gccggtggcttcccaccacaagggagcgccccaggcatgcagggtccaccgctccaacat
ccatccatgtctgggccccccatgtcccaggccaaccatgtggccccggggtccacccag
cccggcatgcctccgcctatggggcctgccacagggggtatgcctgggccaccaactcag
ccagggatgcaggggtaccctccccagcagaacggtgcttttgggcagatgagggcccca
cagcctggctatccagggccgtatcccgggcaacatcccgggcaacatcccgggcagcag
aactttggggcgccccctcaggctcctgcgtccgcccctcccgcacagaaacggttggac
cccgactcaatccccagtccacaagcgcctgacatgccgcctgtgcagaaaacaagacat
agaatagacccagacgctatccccagcccaatccaggtgatcgaggacgaccgggtcaat
aaaagcactgagcccttcaccactggggtcagagggcaagccccacccctcgtcaccacc
aacttccaggtcaaagatcaaggcaacgccagtcctcgcttcgtccgctgcactgcctac
aacgtgccctgcacctccgacatggccaagcagtcacaagtgcccttggctgcaatcatc
aaaccactggccaccctgcccccggatgagacgcccccgtacatcgtggaccacggcgag
agtgggccaatccgctgcaaccgctgcaaggcctacatgtgtccctacatgcagtttatc
gagggcggccgcaggttccagtgcggcttctgcagctgtgtcacggaggtgcctcccaat
tacttccagcatctggaccacaccggaaagagggtagactgctacgaccggcccgagctc
tctatgggcagctacgagttcctggccaccgttgactactgcaagaacaacaagcttcct
cagccccctgccttcattttcctgattgacgtgtcttacaacgctgtgcggagcggcatg
gtgggaatcgtctgccaggagctcaagacgctgctggattacctgcctagggaaaaccct
gacgtgccgtcggctgtgcgcgtgggcttcgtcacctacaacaaggtgctgcacttctac
aacgtgaaggcctctctggcgcagccccagatgatggtggtgtccgacgtggccgacatg
tttgtgccgctgctcgacggcttcctggtcaacgtcaacgagtcgcgcgtggtcattgag
agcttgctggaccagatccctgagatgtttgcagacacgcgggagacagagacggtgttt
gggcctgtgatccaggctggtctggaggccctgaaggcggctgactgtgctgggaaactc
ttcgtcttccacacgtctctgcccatcgctgaggctcctgggaaactgaagaacagggag
gataagaagcaggtcggcacagacaaagaaaaggcgctgttccagccgcaggtcagtttc
tatagcaacctggccaaggagtgtgtggcgcagggctgctgcgtggacctcttcctcttc
cccaaccagtacgtcgacgtggcaacgctcggcgtggtccccacctccaccggaggctcc
atctacaagtacacctacttccaggcacagtccgaccaggagcgattcctgcacgacctc
cggcgagacgtacagaagccgatgggcttcgacgcagtcatgagggtccgcaccagcaca
ggcatcagggccacagacttcttcggctccttctacatgagcaacaccacagacgtggag
ctggccggcctcgactgcgacaagaccatcaccgtggagttcaggcacgacgacaagctc
agcgaggacacgggcgctttgatgcagtgtgcagtgctgtacaccagctgctgtgggcag
cggcggctccgggtgcacaacatggccgtcaactgctgcgcgcagctggccgacctctac
cgcaactgcgagaccgacaccatcatcaacttcttcgccaagtatgcataccgtagcatg
ctcaacagccccaccaagaacgtgcgggacattctggtgaaccagtgtgctcagatcctg
gcctgctaccgcaagaactgtgccagcccctcctctgctggacagctgatcctgcctgag
tgcatgaagctgctgccggtctacctgaactgcgtgctgaagagcgacgtgctgcacccg
gcggccgacacctctctggacgaccgcgcctacctgaggcagctgctcagctgcatggac
gcctcagagagccacgtgttcttttacccacgcctgctgccactgcataagatggacacg
gagagcgatgcgttgccgttggcgatccggaactccgaggagcggctgtccaaggggggg
ctgtacctgctggagacgggcctcaacctcttcttgtgggtgggggccagcgcccagcag
gagctgctgcagaacgtcttcggcacgaccgccttcggacagatcgaccccaacatgacc
tgcttgccggagctggataatcccttctcaaagaagctgcgagacatcatctcggccttc
cgagaccagcgctcacgatacatgaagctgatggtggtgaaacaggatgacaagctggag
ctcatcttcaagcacttcctggtggaggacaagaacaactcgggcggagcctcctacgtg
gacttcctctgccacatgcacaaggagatcaggcagctgctcagctag
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