Clupea harengus (Atlantic herring): 105892836
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Entry
105892836 CDS
T09045
Symbol
fer1l6
Name
(RefSeq) LOW QUALITY PROTEIN: fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892836 (fer1l6)
Membrane trafficking [BR:
char04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105892836 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
105892836
NCBI-ProteinID:
XP_042559212
Ensembl:
ENSCHAG00000003986
UniProt:
A0A8M1K651
LinkDB
All DBs
Position
2:complement(6784336..6812239)
Genome browser
AA seq
1842 aa
AA seq
DB search
MDPTKNTPTTQRKLFGIKVKKKKKANKGLVLANKGALEVSEVEPGPEDPSLGETPESSPL
AGPSGLFPFREIPRTKRSRHLGKILKGESRSKTFQISINITEAKQLVGENVDPSVVMEVG
DERKQTTVKEGTNAPFYNEYFVFDFFGPQNTFFDKVIKLSVMHSKIMRSFCIGSFKLDVG
TVYSQPGHQFINKWAVLMDPSNIQAGVKGYLKCDISVTGKGDSTQPSQKFSDAEEVIEKN
LLLPLNFPSERPWAWFYVKVFRAEGLPRNNSSIMANVTKAFIGDNTALIDPYVVVSFFGQ
VGRTSTQKSTAEPVWNEQIVFKEMFPPLCQRLKIQVIDEGSMNDVAIGTHYIDLRRISND
QDGDKGFLPTFGPAWINIYGAADNSELNEGVGEGASFRGRVLIELAVEILSGNVEMKITR
PTKSTLKEPKGGKAAGKEQAGGAGGEEEKGKAAGPEVIPVENPPTVGVEDHESFMLFGVV
FEASLIDRKIGDRPINFEFTIGNYGNLIDGAQGTSKKRGGAEPHDLDSSQTTPLLESDEP
LLCKPTTPPEKPINVEGNRYYNYLPINQKKPCIHVMSSWEDRTYRLYYSNVLDSIAIAFE
EGVAKAGSLNKQLDAGAEPLLLRVFQAFCRDARNFIAFALRRVKGNRLTLLDKKRLILCK
QELESIIEVIGSITVPKRKPLSVKELLLEAQKLTQKLRFLVEEPQHTLPDVFVWLLSNNK
RVAYARIPARRLLYSENPEEMGRDCGKIKTLFLKPPGRRVSGWTVQAKLDVYLWLGTCQD
STHKMDNLPSGFAALQPGARPAFLLYRDRHRFQLRAHMYQARGLIGADASGLSDPFARVS
FLNNSQTTAIINQTLTPTWNQMLLVNGVTLHGDITELAKEPPSLVIEVYDDDALGKAEYL
GSSVAVPVVCLSTQTYQPPLLQYSPLFCGSLSGGDLLGAFELIQIPESGEDSLPDVDEPD
GLVYPVPAYIRPVLSRYRLEVLFWGLRELKRVQLLSVDRPQVFIECAGKGVNSSVIQSYK
TNPNFSVLVDAFDVELPEDEHLHPPLSITVVDWRAFGRSTLVGSHVINHLGLFKYTPPPA
PVTAPTGPPLRQQDPHSIQVLPMPVQDWHQPEGPEEIYINIEYDAAPILPTPKAEPPPGD
KRESRRRTHRSTKRKKRTIKDESAECVIDWWSKYYTSVGKIRQVREECVWSDGYVLIKWI
DKVIRVGMPVDPLRSCSCQSCCIAVAPLQGLISDGVGSLVSGIKDQMTQSQKTQLVKGVM
EQPKLATLQIYDKELEEEFGHFDDWVKTFELYRGKANEEEGTSDDRLVGKFKGRFCLYKL
PDDEDEGCEGPFRINQGTPPNTETKVLIRVYIVCASNLHPADPDGKSDPYIVLRLGKMEI
KDRDNYIPKQLNPVFGRSFEFQASFPKESLLKILIYDYDMIGGDDLIGETQIDLENRFYS
RHRATCGLPSEYSLEGYNAWRDCIQPTDLLIKFCKENRISGPRFQPGRITVGDKVFTGKT
LFVDEERTVESYEHLALRVLHRWAEMPGVGCRLVPEHIETRTLYHRDRPGMEQGQLQMWV
DVFPMDMPHPXPPVDISPRKPKGYELRIIIWNTEDVVLEDSNILTGQLSSDIYVKGWLKG
LEGDCQETDVHYNSLTGEGNFNWRLVFPFSYMPAEKLLVVSKRESIFALDKTEQKLPAVL
LLQVWDFDRLSADDFLGSLELDLHRIPRGLKTAKACKLEMLSESLEIVSIFQQKRSRGWW
PFSKSGELTGKVEAEFHLVTAEEAEKNPVGRARKEPEPLEKPNRPDTSFSWFVNPFKCFF
HLIWKNYKKYIIVALILLILAVFIALLFYTLPGAISQKIING
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggatccgacgaaaaacaccccgacaacacagcggaaattgtttggtatcaaggtgaag
aagaagaagaaagcaaacaagggtctagtcttggcaaacaagggtgccctggaggtgtct
gaggtagagcctggcccggaagacccttcactgggggagaccccggagagcagtcctctg
gctggaccctctggcctgttcccattcagagagataccccgaaccaagaggtccagacat
ctgggcaagattttgaaaggcgagagcagatctaaaacgtttcagatctcaatcaacatc
acagaggcaaagcaactagtgggggagaacgttgaccccagtgtagtgatggaagtagga
gatgagaggaaacagacaacagtgaaagaggggacaaatgctcccttttataatgagtac
ttcgtatttgactttttcggcccacaaaacaccttctttgacaaagtcatcaaactgtcg
gtgatgcactccaaaataatgagaagcttttgtattggctccttcaagctcgacgttgga
acagtctacagccaaccaggccaccagtttatcaacaaatgggcggtgctgatggacccc
agcaacatccaagccggggtcaaaggttacctgaagtgtgacatcagcgtcacggggaag
ggcgactccacacagccctcacagaagttcagtgatgctgaggaggtcattgaaaagaac
ctcttgctgcccctgaacttcccctcggagcgcccctgggcctggttctatgtgaaggtg
ttccgggctgagggcctcccccgcaataactccagcatcatggccaatgtcaccaaagcc
ttcatcggagacaacactgccctcatagacccttacgtggtggtgtccttctttggccaa
gtgggccggacgtccacccagaagagcacggcagagccggtgtggaacgagcagatcgtc
ttcaaggagatgttccccccgctgtgtcagaggctcaagatccaggtgatagatgagggc
agcatgaacgacgtcgccatagggacgcactacatcgacctgcgccgcatctccaacgac
caggatggggataaaggtttcctgcccacattcgggccggcctggatcaacatctacggc
gcggccgacaacagcgagctgaacgagggtgtgggggagggggcttcgttccgagggcga
gtcctcattgagctcgccgtggagatcctgtctggaaatgtggaaatgaagattacccgc
ccgaccaagtccacactcaaggagccgaagggagggaaggcggcagggaaggagcaggcg
ggaggcgcaggaggagaagaggagaagggcaaggctgcaggaccggaggtcatcccagtg
gagaacccgcctacggttggtgtagaggaccacgaaagcttcatgctgtttggagttgtg
tttgaggcctcattgattgaccggaaaattggtgatcgacccatcaactttgaattcacc
attgggaattatgggaatctgatcgatggtgcccaagggaccagtaagaagagaggaggg
gcagagccacatgatcttgactcctcccagaccaccccccttctggagagtgatgagcct
ttgctctgcaagcccaccacgcctccagagaagcccatcaatgtcgaaggaaacaggtac
tacaactacctgccaatcaaccagaagaagccttgcatccacgtgatgagcagctgggag
gaccgcacctaccgcctgtactactccaacgtcctggacagcatcgccatagcattcgag
gagggcgtggccaaggcaggatcactgaacaagcagctcgacgcaggggcggagcctctt
cttctcagggtctttcaggcgttctgcagggacgccaggaactttatcgcctttgctttg
aggagggtgaaggggaaccggctgaccctgctggacaaaaagcgtctgattctgtgcaaa
caggaactggagagcattattgaggtgatcggctcgataacagtgcccaagaggaagcct
ctgagtgtgaaggagctgctgctggaagcccaaaaactcacacagaaactacgcttcctt
gtggaggagcctcagcacacccttccagatgtgtttgtgtggttgcttagcaacaacaag
cgtgtggcgtatgcccggataccagcccggcgccttctctattcggagaacccggaggag
atgggtcgggactgtggcaagatcaaaaccctcttcctcaagcccccaggtaggagggtg
agtggctggacggtgcaggccaaactggacgtctacctgtggctgggcacctgccaagac
tccacccacaagatggacaatctcccatcaggctttgcggcgctgcaacctggggccagg
ccggccttcctgctgtacagagatcggcaccgcttccagctgcgggcccacatgtaccag
gcccgtggactcatcggtgctgatgcctccggcctctccgacccattcgccagggtctcc
ttcctcaacaacagccagaccacagcaatcatcaaccagaccctgacgcccacctggaac
cagatgttgctggtgaacggggtcactctgcatggagacatcactgaactggccaaagag
cccccctccctcgtcatcgaggtctacgacgatgatgctctgggtaaagcggagtacctg
ggctcctcagtggcagtcccagtggtgtgtctgtccacccagacctatcagccccccctg
ctccagtacagccccctcttctgtggcagcctatcaggaggagacctgcttggagccttc
gaactcatacaaatcccagagtctggagaggacagtctgccagatgtggatgagcctgac
gggctggtctaccccgtgcctgcctacatccgcccagtgctaagcagatacagactagag
gtgctattctggggcctgcgggagctgaagagggtgcagctgctctctgtagaccgtcca
caggtgtttatcgagtgcgctgggaaaggggtgaactcctccgtcatccagagctacaag
accaaccccaatttcagtgtgctcgtggatgcctttgatgtggagctgcctgaggacgaa
cacctccaccctcccctcagcatcacggtagtggactggagggcctttgggcgaagcacg
ctggtggggagtcacgtcatcaaccacctcggcctcttcaagtacacccccccacctgcc
cccgtcaccgcccccactggccccccactgaggcagcaggaccctcacagcatacaggtg
ctccctatgcctgtgcaagactggcatcagccggagggacctgaggagatctacatcaac
atagagtacgacgcagcacccatcctgcccacacccaaagctgaacctccacccggggac
aagagggaaagcaggaggcgcacgcacaggtccaccaagaggaagaagcgcaccattaaa
gacgagtccgcagagtgtgtgatcgactggtggtccaaatactacacctctgtggggaaa
atcagacaggtgagggaggagtgtgtgtggagtgatggctatgtgctgatcaaatggatt
gataaagtgattagagtgggtatgccagtagatccactcagatcctgctcttgtcaatcc
tgttgtattgcagttgctccgcttcagggcttgatctcggacggagtaggttctctggtg
tctggaataaaagaccagatgacgcagtcacagaaaacccagctggttaagggggtgatg
gagcaacctaaactagccaccctacagatctatgataaagagctggaggaggagtttggg
cactttgatgactgggtgaagacgtttgagctctaccgtggcaaagccaacgaggaggag
ggcaccagcgacgaccggctggtgggcaagttcaagggtcgcttctgtctgtataaactc
ccagacgatgaggacgaggggtgtgagggccccttcaggatcaatcaggggaccccaccc
aacaccgagaccaaagtcctcatccgggtctacatagtctgtgccagtaacctgcaccca
gcagatccagacgggaagtcagacccctacatcgtcctgagactgggcaagatggagatc
aaagaccgggacaactacatccccaaacagctcaacccagtgtttggcaggtcctttgag
ttccaggcctcgttccccaaagagtccctgctgaagatcctcatctatgactacgacatg
attggaggggatgacctgatcggggagacgcagatcgacctggagaaccgcttctacagt
cgccacagagccacctgtggcctgcccagcgagtactcacttgagggctataacgcatgg
agggactgcatccagcccacagacctactcatcaagttctgtaaggagaaccgaatcagc
gggccgcgcttccagcctgggaggatcacagtcggagacaaggtcttcaccgggaaaacc
ctgtttgttgatgaagagcggacagtggagtcctatgaacacctggcactgagggtgctg
cacaggtgggcggagatgccaggtgtgggctgccggctggtgccggagcacatcgagacg
cgcacgctctaccacagagacagacccggcatggaacagggtcagctgcagatgtgggta
gatgtattccccatggacatgccccatccanggccccctgtggacatctccccccgcaag
cccaaagggtatgagctgagaatcatcatatggaacactgaggatgtggtcctggaggac
agcaacatcttgactggacagctgtccagtgacatctacgtcaaaggctggctgaagggc
ctggagggtgactgccaggagacagacgtgcactacaactcgctgacaggtgagggaaac
ttcaactggcgcctcgtgttccccttcagctacatgccggcagagaagctgctggtggtc
agcaagcgcgagagcatcttcgccctggacaagaccgagcagaagctgcccgctgtgctc
ctgctgcaggtctgggacttcgaccggctgtccgcagacgacttcctgggctctctagaa
ctggacctgcatcggattccccgcgggctgaagacggcgaaggcctgtaagctggagatg
ctgagtgagagcctggagatcgtctccatcttccagcagaagcgctctcgaggctggtgg
cccttctccaagtctggggagctcacgggaaaagtggaggcggagttccacctggtgact
gcagaggaggcagagaagaacccagtgggtcgagcccggaaagaaccggaaccactggag
aagccaaatcgccccgacacctccttctcctggtttgtgaacccgttcaagtgtttcttc
cacctgatctggaagaactataagaagtacattatcgttgccctgatcctgctcatcttg
gccgtcttcatcgccctgctcttctacacacttcctggtgccatctcccagaagattatc
aatggctga
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integrated database retrieval system
