Clupea harengus (Atlantic herring): 105892851 Help Entry 105892851         CDS       T09045                                  Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism char  Clupea harengus (Atlantic herring) Pathway char03430   Mismatch repair Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     105892851  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:char03400]     105892851 DNA repair and recombination proteins [BR:char03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      105892851 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  105892851 NCBI-ProteinID:  XP_031434953 Ensembl:  ENSCHAG00000020180 UniProt:  A0A6P8G5R6 LinkDB All DBs Position 13:27826096..27839148 Genome browser AA seq 1396 aa AA seqDB search MAKQSSLFNFFTKSPPAVGKSKPNPSPVEADLPSSVQNTSPKEEAKQAAKSHKKTAAKPK TKSTKTGINKLFGNKTPSNVVKESQPSPFSAGALVWTKLEGHPWWPCMVVPQPSSGQQMR GKGRHQRLHVHFFDEPPTRGWVSTKFVREYQGSNSTDAKSGGLFFSGKPVIRRAMEMADD AMPKSTEERLKMPLCTDLSDEEDDDEMEVDKSTLSDESEEEEESEEEEEEVNPGRRSSRV AAEKGQKSKRRRIVVASDSGDSDEEFKPNKANASSDEDEDEEGVGSGVDEAEEEEEEEES EPETDPESPVKPVKRKRPAEKPAKAKPMTPAPSEPPKRNLSAASSVSANTKSRLSAFSAP DAFDSQTGSAGGVDGSVTVWDHEKLDWLQEGRRKDRRRRRQSEEEYDPTTLHVPDDFLNR CTPGMRRWWELKSGMFDAVIFYKVGKFYELYHMDAVIGVNEMGLTFMKGVWAHSGFPEIG FGRFSDVLVQKGYKVARVEQTETPDMMEVRCKSMARPTKFDRVVRREVCRVITRGTQTYS VLDGDPSESHSKYLLSVKERAGEGEGGAAGLSHTYGVCFVDTSMGRFHVGQFRDDRHCSR LRTLVAHYAPAQVLFEKGNPSAETRKVLKASLSSAIQEGLSAGSQFWDAQKTLKTLAEED YFKESAEKSDDGSGGATLPLTLKSMTSESDSLCLTPKEGYELALSALGGCISYLKKCLVD QELLSMANFEEYVPVDVEMEKSEGPGSSFFAKTRQKMVLDGVTLANLEILQNGSTGGLEG SLLERLDTCRTPFGKRLLKQWLCAPLCNPSSILDRQDAVEDLMAIPAQVSEVTELFKKLP DLERLLSKIHSMGTPLKAQDHPDSRAVMYEEVVYSKRKIADFLAALEGFRAMQEIVSVLS AVTEGFRSKLLRQVVVLKTTEDGGEGLFPDLSPELKRWDTAFDHQKARNTGVITPKAGFD PEFDQALAEIKDCERHLQEYLDRQKKRLGCRTLSYWGTGKNRFQMEVPDSVSERNVPEEY EVRSTKKGWKRYATREIERWFSEMQGWEEKRDAALRDCMRRLFYNFDKNYRDWQTAVECM SVLDVLLSLSRYSQAGDGPMVRPEVLLPGGHQDSPPFLDLRGSRHPCVTKTFFGDDFIPN DISIGCPGEEDEDEGRGGGKETATCVLVTGPNMGGKSTLMRQCGLIVILAQLGCHVPAES LRFTPVDRVFTRLGASDRIMSGESTFFVELSETASILLHGTRHSLVLLDELGRGTATYDG TAIASAVVKELAERICCRTLFSTHYHSLVEEHAKDPSVRLGHMACMVENECEDPSQETIT FLYKFIGGACPKSYGFNAARLASLPEAVIQSGHRKAKEFEKSTVTLRLFRKLCAFAEDPS AGLEQFAPLVEMMASL NT seq 4191 nt NT seq  +upstreamnt  +downstreamnt atggcgaaacagagctcacttttcaacttttttacgaagtcaccgcctgccgttggtaaa agtaagccaaatccatcacctgtcgaggctgacctgccgtcctcggtgcagaacacgtct cccaaagaagaggccaaacaagccgctaaatcccataaaaagacggcggcaaagcccaag acaaaatccactaaaacaggcataaataagttgttcgggaacaaaaccccttcaaatgtt gttaaagaaagtcagccgtccccgttcagtgcgggtgctctggtgtggacgaagctggaa gggcacccctggtggccatgcatggtggtgccccagccttcgagcggccaacagatgcga ggcaaagggcgacaccagcgcctccatgtccacttctttgacgagcccccgactcgaggc tgggtcagcaccaagtttgtaagagaatatcaaggttcaaacagcaccgatgccaaatcg ggaggcctgttcttcagtgggaagcctgtgattcgccgggctatggagatggcagacgac gccatgcccaaaagtacagaggagagactgaagatgccactgtgtaccgatctgtctgat gaggaagacgacgatgagatggaggtggacaagtccactctgagtgacgagtctgaggaa gaggaagagtctgaggaagaggaagaggaggtgaaccctggccgccgctcgtcccgggtg gccgctgagaagggtcagaagtccaaacggcggcgcatcgtggtggcctcagacagcggc gactccgacgaggagttcaagcccaataaggccaacgccagcagcgacgaagacgaggac gaggaaggcgtaggcagcggggtggacgaggcagaggaggaggaagaggaggaggagagc gaacccgagacggaccccgagagccccgtcaaacccgtgaagcgcaagcgtcccgccgag aagcccgccaaggccaagcccatgactccggccccctcagaaccacccaagagaaacctc tccgctgcgtcttctgtgtcggcgaacaccaagtccagactctctgccttctcggcaccg gacgccttcgacagccagaccggcagcgccgggggagtggacggcagcgtgaccgtgtgg gaccacgagaaactggactggctgcaggaaggcaggaggaaggaccgccggcggagacgc cagtccgaggaggagtacgaccccaccacgctgcacgtgcccgacgacttcctgaaccgc tgcacgccgggcatgcgccgctggtgggagctcaagtcggggatgttcgacgccgtgatc ttctacaaggtgggcaagttctacgagctctaccacatggacgcggtgatcggcgtcaac gagatgggcctcaccttcatgaagggcgtctgggcgcactcgggcttccccgagatcggc ttcgggcgcttctcggacgtgctggtgcagaagggctacaaggtggcgcgcgtggagcag acggagacgcccgacatgatggaggtgcgctgcaagagcatggcgcggcccaccaagttc gaccgcgtggtccggcgcgaggtgtgccgcgtgatcacgcgcggcacgcagacctacagc gtgctggacggagacccgtcggagagccacagcaagtacctgctgagcgtgaaggagcgg gcgggcgagggggagggcggggccgcgggcctctctcacacctacggtgtgtgcttcgtg gacacctccatggggcgcttccacgtgggacagttccgggacgaccggcactgctcgcgc ctgcgcacgctggtggcccactacgccccggcgcaggtgctcttcgagaaggggaacccg tcggccgagacgcgcaaggtcctcaaggcctcgctctcgtcggccatccaggaggggctc agcgccggctcgcagttctgggacgcccagaagacgcttaaaaccctggcggaggaggac tacttcaaggagagcgcagagaagagcgacgacggctcgggaggtgcgacgctccctctt acactgaaaagcatgacctctgagagcgattcgttgtgccttacgcctaaagaggggtac gagctcgccctctcggccctcggagggtgcatctcttatctgaagaagtgtctggtggac caagagctgctctccatggccaactttgaggagtacgttccagtggacgtggagatggag aagtcggagggaccagggtccagcttttttgccaagacccgccagaagatggtcctggac ggggtgaccttggccaacctggagattctccagaacggctccacaggcggtctggaagga agtctgctggagcgcctggatacgtgtcgcacgcctttcggcaagagactcctgaaacag tggctctgcgctcccctgtgcaacccctcctccatcctggaccgccaggacgccgtggaa gatctcatggccattccagcccaggtgtcggaggtgacggagctcttcaagaagcttccc gacctggaaagactcctgagcaagatccacagcatgggcactcctctgaaggcacaagac cacccagacagccgcgccgtcatgtacgaggaggttgtctacagcaagcgcaagatcgcc gacttcctggccgcgctggaagggttcagggccatgcaggagatcgtgtccgtcctgtcg gccgtgaccgagggattccgctccaagcttctccggcaggtggtggttctgaagacgacg gaggacggcggcgagggactcttcccagacctctccccggagctcaagcgctgggacacg gccttcgatcaccagaaggctcgcaacaccggggtcataacccccaaggccggcttcgac ccggagttcgaccaggccctggcggagatcaaagactgcgagaggcacctgcaggagtac ctggaccgccagaagaagaggctcggctgcaggaccctgtcctactgggggaccggcaag aaccgcttccagatggaggtcccagacagcgtgtctgagcggaacgttccggaggagtac gaggtgaggtccaccaagaagggctggaagcgctacgccaccagggagatcgagcgctgg ttctcggagatgcagggctgggaggagaagcgggacgcggccctcagggactgcatgagg aggctcttctacaacttcgacaagaactacagagactggcagacagcagtggagtgcatg tctgtgcttgatgtgctgctgagcttgtcgcggtacagccaggcaggagatggacccatg gtccgtccggaggtgctgctcccggggggccaccaggactcgccccctttcctggacctg cgggggtcccggcacccctgcgtcaccaagaccttcttcggggacgacttcatccccaac gacatctccatcggctgcccgggggaggaggacgaggacgagggccggggcggggggaag gagacggccacctgtgtgctggtcacggggcccaacatgggggggaagtccaccctcatg agacagtgtgggctgatcgtgatcctggctcagctaggctgccacgtcccagcggagtcc ctgcgcttcacccccgtggaccgagtcttcacccgcctgggcgcctccgaccgcatcatg tccggggagagcaccttcttcgtggagctgagtgagacggccagcatcctcctgcacggc accagacactctctcgtgctcctcgatgagctgggcagaggcacagctacatatgatggc acagcgatcgccagtgctgtggtgaaagagctggccgagcgaatctgctgccgtaccctc ttctccactcactaccactccctggtggaggagcacgccaaggacccctccgtcagactc ggacacatggcgtgcatggtggagaacgagtgtgaggaccccagtcaggagaccatcacc ttcctctacaagttcatcggcggtgcctgccccaagagctacggcttcaacgccgcccgg ctggccagcctccccgaggcggtcatccagtccggccacaggaaggccaaggagttcgag aagagcaccgtcaccctccggctcttcaggaagctgtgtgcattcgctgaggatccctct gctggtctggagcagttcgccccccttgttgagatgatggccagtctgtga

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