Clupea harengus (Atlantic herring): 105892865
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Entry
105892865 CDS
T09045
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892865 (arhgef40)
Membrane trafficking [BR:
char04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105892865 (arhgef40)
SSDB
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Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
Motif
Other DBs
NCBI-GeneID:
105892865
NCBI-ProteinID:
XP_031440570
UniProt:
A0A6P8H0I1
LinkDB
All DBs
Position
18
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AA seq
1887 aa
AA seq
DB search
MGSEAVEDCVQGALASLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFIPAKHLLH
RLQQHACSQYLGCLFVHSGWPLCLGERVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGCKRDGGAGALDTCLVSTGDGVL
RLPWVEVVYPKFLGNPQGDEFGDLALPANPDNPGNPTQLSSPGMRTGRGGAGGGGVGGGG
LGWGSSSGELDSWSWDEEDDDDGNDPDGTEAEAALALVRRRASEDALGRRGPSSAVVAPG
DREGDYVELLEPRGGPDGGADPMQQRYLEMHAVSKTKTLPLCRRAKAIKLRRGKAWAFGR
TDGGVGGKSGAVARRDSGSQAGRDWLQYRPVPRVIDLGRERRNNPTQDLNVEERYVRDPT
GLESRGLYLEGPAKERRPGVGREREGAACTLPWEESQRCRGSANSRGGSGAQRGQEETEV
ANQKGEHTGEGQSDLDQGSHSDSVFEDTDKPPADSLSSGDCPSTPLAETPVSPVCPDNPL
AETPVSPVCPDNPLADTCGEGKSATSQAAGISECCDSATRGTPPQLGETGENSNSERTHS
QPGTDKATEERHCGKSEDRVCPRGKEVKMGGLRAPRRKRKVKGGKGKVKSGGRGNQKGKD
QATPKNQNKAPQNGCAIASATKLPLSEDDQSEQPKQSSGPDIGPLSTNEKEEKAEEEPKE
SDKENQAVITDNPPNADGQSCTPTTDDSPEVETSSTPPDQLDGESPKAPPLLRELDHELL
QSGKLLLTGTVDRLGRGLVLMEAHLPEDGYHDEEMTRVLACFYYITRPAAKEKGLTVIID
SRQAPPSELCLSALKLFKTQVPEGLGSVLILTDEQQESSQHALDGIEVRTVRGTGVLQQF
VDRQQLTTEMDGDFLHSHSDWLNFRLSLERLTERCESALSLLEDALQSMEKEPLPANIKT
VTAGVDKHRHLMTSVLADQRLTELQCRGGAWLAGLSNGTSGLAQRSPDCRAALAMTSKLY
DSVDDALHNLVQVSNQKGRDLEALGRLAALVDKLDKSEKEIASVQEQLEDFRDPPLSLSR
LSLKQQKFKSFRESAMELNRDTLVILGEVEGWGELEWAGLPAVIDRLPPVREKLRDMSHC
LSDCWTQLDNTQRLLSTLTEASQWCDVVSSSSPSSSSSSSSSSSSPLSSLPPIPPSRFQD
ARALALELGGGPLLDLWSQTLDRYQQTLAHFKSRLLQAERTGPLDGGPGHQRAGGGGAGG
MRPLGHGGSSVWEVLGGGGGGGGGDGESDVADCWAGEGVLQSWGSLASLFRPQNCSTLKI
GEERRKDGGTGGGGVAGGGVGPGGGKFFQALLHPAKKSVIPTDAPLPPKPPRKRHPSFDL
QALLAPRRTPTPTPARPPELPMGPASRNSPLSWLGRRALADPVLTAGMAAAVPGWRERET
GGGGGGGGAGGGLGGGLGGGVLIRGVEVSSKEVADHTGLSRQHVLLSRAERETGGERQGT
TAQSKLYVQWCRLVNSERQYVSTLRGVEEHFLPQLEGPDVPGALRGQSQALFSNWSSLCT
FHTQYLLPAMEGALTQTLQQQDCFIKYREHFLLYSHYIHTKPDLDSLLVSQATEFFKLKL
SSFYPHSPLAFPGCLVAPVQRLEQYCEALEELSGLNPNPAPDTALSILRHARQHGEDLRA
SDLITGCPVPVGERGELVRFGELLVCGGPRRRKSGLRSVFLYQHHLIFTKLRTPNPGRTA
YSFKHSIKTGEMGLTQSVGEDGLKFEVWVRQAPRTRDCLTLQAHTPGDKAAWAHDVAQLL
WTHAINNTELCLKETLCVGMSSRLLLDMTGAPATELDSTFSLNDRVQSSCSDSSSVGSQK
EGGSPTSSRDSKRNSALSQSTSPSTAV
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagaggcagtggaggactgtgtgcagggggctctcgcatccctctacccccca
tttgaaagcacagccccccctcttctctctcaggttttttctgtcctggagtcaacctac
cagcatgacagcttgaggtacctcctggattacttcatcccagccaagcaccttctccac
agactacaacaacatgcatgctctcagtatctaggctgcctcttcgtccactcaggctgg
ccgctgtgtctgggcgagagggtagtggtgcagctctccaccctggactggaggctcctg
cgcagtaccgacttctacctccaggtggtgcccttctccacccgctgcccccgcctggcc
ctcaagtgcctggcgcccggcggacgcaacgtgcaggaggtgctggtgcccgagtcgcag
caccccctggtgttcaccaccgagtggctgcacagcgtcaacaaggagcgcggctgcaag
agagacgggggagcaggggcattggatacgtgtcttgtaagcacgggcgacggtgtcctg
cgtctgccgtgggtcgaggtggtgtacccaaagttcctcggcaacccccagggagacgag
ttcggagacctggccctgcctgccaaccctgataaccctggtaaccccacccagctctcc
tctcctgggatgaggaccggtcggggcggggctggcggtgggggtgtcggcggcggcggt
ctcggctggggctcctcctctggcgaactggattcctggtcgtgggatgaggaggacgat
gacgatggcaatgacccagacggcaccgaggccgaggcagctctggccctggtgcgccgg
cgggccagcgaggacgccctgggtcggcgggggccgtcgtcagcagtggtggcacctggt
gaccgggagggggattacgtggagctcctggagcccagaggtggtccggatggaggggcc
gaccccatgcagcagcgctacttggagatgcacgctgtcagcaagaccaagacgctgccg
ctgtgccgacgcgccaaggccatcaagctgcggcggggcaaagcctgggcgttcggacgg
acggacggtggggtagggggcaagtcgggggctgtcgctcggagagatagtggcagccag
gctggaagggactggctgcagtatcggcccgttccccgagtcattgatttgggccgcgag
aggcgcaacaatcccacacaggacttgaacgtggaggaacgatacgtcagagacccaaca
ggccttgaaagcaggggactttatttggaagggccggccaaggagaggaggcctggagtg
ggccgggagagggagggtgctgcctgcacgctgccctgggaggagagccagaggtgtaga
gggtcggcaaacagcaggggagggtcaggagcacagcgggggcaggaggaaacagaggtg
gccaatcagaaaggggaacacacaggtgagggacaatcggatctggaccaaggatcccat
tcggactctgtgtttgaggacactgacaagccaccggctgactccctcagcagcggggat
tgtccttccacaccattggctgaaacgcctgtaagccccgtgtgtccagacaacccattg
gctgaaacgcctgtaagccctgtgtgtccagacaacccattggctgacacgtgcggggaa
ggaaaaagtgccactagccaagcggccggtatttctgaatgctgcgattcagcaacgagg
gggacaccacctcaattaggagagacaggagagaactcaaactcagagagaacacactcc
caacctggtacggacaaggccacggaagaaaggcattgtgggaagtcggaggacagggtt
tgcccccgaggaaaggaagtgaagatgggaggattaagggcacccaggaggaagaggaag
gtcaaaggagggaaagggaaggttaagtctggtggccgtggcaaccaaaaaggcaaggat
caggctactccaaaaaaccaaaacaaagcacctcaaaatggctgcgccatcgcgtcagcc
accaaactgccactcagtgaagacgaccaatccgagcaaccaaagcagtcctcaggacca
gacatagggccactctcaaccaatgagaaagaagagaaggcagaggaggaaccaaaggag
agcgataaagaaaatcaggcagtcataacagacaaccctcctaatgcagatggccaatca
tgcacacctacaactgacgactccccagaagtggagacatcatcaacacctcctgaccaa
ttggatggtgaatctcccaaagccccaccccttcttagggagttggatcatgagttgctc
caatcagggaagctgttactgacaggtacggtggacaggctcggtcggggtctggttttg
atggaagcacaccttccagaggatggttaccatgacgaggagatgaccagagtgttggcc
tgcttctactacatcactcggccagcggcgaaggagaaaggcttgacagtaatcatcgac
agcagacaagctcctccctctgagctctgcctttctgccctgaaacttttcaagactcag
gtgccagagggccttggttcagtgctcattctgacagatgagcagcaggagtcgtctcag
cacgctctggatggaatagaggtgcgcacggtgcggggaacaggggtccttcagcaattt
gtagacaggcaacagctgaccacagagatggatggggactttctgcattctcactctgat
tggctgaacttccgactgagtttggaaaggctgactgagcgctgtgagagcgccctctct
ctgttggaggatgcactgcagtctatggaaaaggaacctctgcctgccaacatcaagact
gttactgcaggtgtggacaagcacaggcacctcatgacgagcgtcctcgccgaccaacgg
ctgactgagctacagtgcagaggcggggcttggctggccggactgtccaatggcacatca
ggactggcacagaggtcaccagactgcagggctgccctggctatgacttccaagctatat
gacagtgtagatgatgcactccacaatcttgtccaagtgtccaatcagaagggtcgtgac
ctggaagcacttggaaggctggctgcccttgtggataaactggataagtctgagaaggag
atagcgagtgttcaggagcagctggaggactttagggacccgcccctctcactcagcaga
ctctccctcaagcagcagaagttcaagagcttcagggagtcagccatggagctgaacagg
gacactctggtcatcctgggggaagtggagggctggggagagctggagtgggcggggctt
ccagcagtgattgacaggctaccgccggtccgggagaagcttcgggacatgagccactgt
ctgtctgactgctggactcagctggacaacacacagagactactgtcgaccctgacagag
gcctctcagtggtgtgacgtcgtctcctcctcctccccgtcctcctcctcctcctcctcc
tcctcctcgtcatcccccctctcctccctgcctcccatccctccgtctcggttccaggac
gcgcgggccctggcgctggagctgggcgggggccccttgctggacctctggtcccagacg
ctggatcgctaccagcagacgctcgcccacttcaagagccgcctgctgcaggccgagaga
acggggcccctggacggggggcccggccaccagcgcgccggaggaggaggtgctggtggt
atgagacccctgggccacggagggagcagtgtgtgggaggtgctgggaggaggaggtggg
gggggcggaggtgacggggagagcgacgtggcggactgctgggcgggggaaggagtgctg
cagtcgtgggggtcgctggcctcgctgttccggccgcagaactgctccacgctcaagatc
ggggaggagaggaggaaggacgggggcacgggaggaggaggagtggcgggcggaggagtt
ggacctggtggaggaaagttcttccaggcgctgctgcatccagcaaagaagagtgtgatt
cccacagacgctcctctccctcccaagcctccccgtaagcgccaccccagcttcgacctc
caggccctcctggctccgcgccgcacccccactcccacccctgcccgaccgccggagctc
cccatgggcccggccagccggaactcccccctgtcctggctgggtcgacgggccctggcg
gacccggtgctgaccgcgggcatggcggcagcagtaccgggctggagagagagggagacg
ggaggcggaggagggggaggaggggcaggaggaggattaggaggaggattaggaggaggg
gttctgatccggggcgtggaggtcagcagcaaggaggtcgctgaccacaccgggttgtca
cggcaacacgtgctgctgagccgtgccgagagggagacgggcggggagagacagggaacc
acggcacagagtaagctgtacgtgcagtggtgccggctggtgaactccgagcgccagtac
gtgtccaccctgcggggcgtggaggagcacttcctgcctcagctggaggggcccgacgtc
ccaggggccctcaggggccagagccaggccttgttctccaactggagcagcctgtgcacc
tttcacacgcagtacctcctcccggccatggagggcgctctcacgcagaccctgcaacag
caggactgtttcatcaaatacagggaacactttctcctgtactcacactacatccacacc
aaaccagacctggactccctgctggtcagtcaggccacagagttcttcaagctaaaactg
tcgagtttctacccccactcgcccctggcgtttcctggctgcctggtggcgccggtccag
aggctggagcagtactgcgaggccctggaggagctgagcggcctcaaccccaaccccgcc
cccgacacggccctgtccatcctcagacatgcccggcagcacggcgaggacctgcgggcc
agtgacctcatcacagggtgtccggtgcctgttggtgagcgtggggagctggtgcgtttc
ggcgagctgctggtgtgtggagggccgaggaggaggaagtcgggcctgaggagtgtgttc
ctatatcagcaccacctcatcttcaccaagctgagaacgcccaaccctggacgcacggcc
tacagtttcaaacacagcatcaagacgggggagatgggtctgacccagagtgtcggggag
gacgggctgaagtttgaggtgtgggtgcgccaggctccgcgcaccagggactgcctcacg
ctgcaggcccacacgccaggggacaaggcagcctgggcccacgatgtggctcagctgctg
tggacccatgccatcaacaacacagagttgtgtctgaaggagactctgtgtgtggggatg
agcagtaggcttctgttggacatgactggagcacccgccacagagctggactccaccttc
agcctgaatgaccgagttcagagtagctgttctgactcttcttctgtggggagccagaag
gagggaggatccccgacctcatccagagactccaagagaaactcggctctgtctcagagt
acatcaccttctactgctgtctaa
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