Clupea harengus (Atlantic herring): 105892893
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Entry
105892893 CDS
T09045
Symbol
piezo1
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892893 (piezo1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105892893 (piezo1)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105892893 (piezo1)
Ion channels [BR:
char04040
]
Other channels
Mechanosensitive channel (Piezo)
105892893 (piezo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
105892893
NCBI-ProteinID:
XP_031425136
Ensembl:
ENSCHAG00000022740
UniProt:
A0A6P8FND8
LinkDB
All DBs
Position
6:19654897..19723152
Genome browser
AA seq
2545 aa
AA seq
DB search
MELQVVCGLLYCFLLPTFLLAACLFRYNALSLVYLLYLLLLPWFLWPNKHTLRGHTGRFI
KALFCTSLLFLLGHVSFQICLYTIPELDDALGQNCSSVETLSRHVGVSRLPLDDPWNMVR
LLTPELGIFIISLVTMVTCNRLVKKREEGLTSPTIQNSVQEEKEDGEEEEEEQQEEEEEG
RLFPSVADNEEEEEENGIPSAAALLAARLRATAHRFLRDLGRVLAITLLALAGITLPSAF
SAVYFLLFVGVCTWWACHFPISHLGFNALCVMVGFFTAGHLVCLYLYQSPFAQGIFPPAS
LWARLFGLKDIIRPGNCSSYSSHDLILNTEHDWPVYVNPGILLLLYITVAIVLKISGHGG
PDKHEEGRLSARDVLPGGGEEVELRPWGPERQSTEDDTKVERDRKHTQMLLSIGESPTTE
SEGANSHVTNGSSRQDLGLGSSLPAQHGDSPLFLVGRMVMEQSYICALIAMMVWSITYHS
WLTFVLLLWACFIWMMRARRHFATLCSPFILLYGLALCGLQYVWAMELEPELPQHVGTMS
LRQLGLDRAQYPCLRLGAMLLYTLTFWLLLRQSVKNNFSKKKSITAPLTEVTTGEGIGQN
ESVLKVLGGMVMSLYAKYWIYVCGGMFIMVSFAGKLVGYKIVYMLLFLLCLCVYQVYYSL
WRRLLKVFWWLVVAYTMLVLITIYTFQFEDFPDYWKNFTGFTEEQLADIGLETFALSELF
SSILIPGFFLLACILQLHYFHRPFMRITDLDHVSPIHRKRNTPRPEVVRGTDGVGFEEEE
LVTDLGDDEELEDDEMIPSKWGLVMDRLIVLFGKFDDTLSHIQAFIWRLLELHILKMVAF
CVVWVALGEPSVMNLVLVVLWSFAMPYARFRHMASCLSTAWVCVIIVCKMLYQLSIVNPI
EYSNNCTLPLANETNLHLEEMQNSILYKAPVDPANWFGFRKDATVLGYIKNHLLVLMLLV
FEVTVYRHQAHHYKQLQRSPPNIPKLFPNATRDTLDQSLLSCIKYLLSYSFYKFGLEICF
LMTVNVIGQRMNFLVIAHGCWLVAMLVRRRRAAIAEIWPKYCLFLAIFTIYQYILCVGIP
PALCIDYPWRWSSTVTINSALIKWIYLPDFYTIPNSKNLMADFLLLMCASQQWHVFENEK
KEEWMVLGGENKDNPNPMDGVPFNPAPNFINCRCYLDMAKVLVFRYMFWFVLAVVFVTGA
TRISVFGLGYLMACFFFLLFGTQLLAKKSHTRLTLWDCLIMYNVGVIISKNLLSILACVF
VAEMQKNFCWVIQLFSLVCTVKGYYDPKEVSDKECILPVEEAGIIWDSICFFFLLLQRRV
FLSFYFLHVTADMQASARQASRGFELFRATLKKNMKFHQKAEKKSLQQLKRSMERIRSKQ
QKYKGGRKASSSKEGKASDSQEEKKERKSSKKKWQRPWMDHATVLHSGEYYLFESDSEDE
EELFSEEQKPPRQSAFQLAYQAWVTSAKEALRERQQRQKEQRRLERERRQQASLQAASGD
GEEPVFEEGTSQDGELEEEGEESGSRSDMVQRILDILRFLRVLFLAMVDGVTLWLNMLTK
QYVDTSTVLCNERYMIIHNISQGPREPLDDQLSQGSESPTLETCLDETETDQLHSSGAIS
GAELEDIELDHSTPRASAYSATLCPEPPQELEVLPWPDRHQRHSRTASEMLTDRVFFVEE
LVQSSEFYSSQNRLLKLLFALYSLLAANSELVCYLIIVLNNVVTASVISLALPILIFLWA
MLAVPRPSKRFWMTAIVYTEVMVVVKYLFQFGFFPWNSLYEMRLNEDKPYFPPRILGLEK
SDNYIRYDLLQLLALFFHRSLLMKYGLWDQEGPLEEKSPQSAEVQTKREDEEECRPSHTP
SLTELEDGAAETPQRLESEPEPLDTQPTPEPTPEPPPASPTEQGAGKKGGLLRFRRKKTS
GKGGAESKEPKKKSKGKRREATSRKLKAVGFKIKELVISAVQNIYRPTYGFFRNILHAEY
QATTDVYALMFLTDMVDFIIIVFGFWAFGKHSAAADIASTLQDDQVPEAFLVMLLIQFST
MIIDRALYLRKTVLGKLIFQIILVFGIHLWMFFILPAVTERMFNQNFVAQLWYFVKCIYF
TLSAYQIRCGYPTCILGNFLTKKFNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLS
DWMCVEDIYANTFIIKCSRETEKKYPQPKGQKKKKIVKYGMGGLIIFFLICIIWFPLLFI
SLVRSVVGVVNHPMDVTVTVKLGGYEPLFTMSIQQQSIQPFMEHDYAKLTKHFGNNAGAM
QFITLYSFEDIVTANIEGSSGSVWRISPPSRQELIKELLGTAEMTLRLAWNFQRDLGKGG
TVENTFDKHSIQLEPGDPVRADLASLLGGNRTEPVLVPRMFPNYIRAPNGAEAKPVSQLY
EGDEEGYQEVTLSLMSGGAQEWWDISIAGCDPSTKACGVLPMVIFNDKVSPPSLGFLAGY
GIMGLYVSVVLVIGKFVRGFFSEISHSIMFEELPCVDRILKLCTDIFLVRETGELELEEE
LYSKLIFLYRSPETMIKWTREKDKD
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atggaactccaggtggtgtgtggactgctctactgcttcctgctaccaacgttcttgctt
gcagcctgcctgtttcgctacaatgccctgtccttagtctaccttctctacctactgctg
ctcccatggttcctgtggcccaacaagcacacattacgagggcacacggggcgtttcatc
aaagcgctcttctgcaccagcctgctcttcctgctcggccatgtctccttccagatctgc
ctctacaccatccctgagctggatgatgccctgggacagaactgcagctcagtggaaaca
ctgtcaagacatgttggggtgtccagattgcccctggatgacccgtggaacatggttagg
ctcctgaccccagagctgggcatatttatcatctcactggtcaccatggttacctgcaac
cgccttgtgaagaagagggaggaaggcctgacttcgcctacaatccagaattccgtgcag
gaagaaaaagaagatggggaggaggaggaggaggagcagcaggaggaggaggaagaaggt
cggctgttccccagtgttgctgacaatgaagaggaggaagaggagaacggcatccccagc
gcggcagccctgctggctgccaggctgcgagctacggcccaccgcttcctcagggacctg
gggcgcgtgctggccattactctgctggctctggcaggcattaccttgccatccgctttc
tctgctgtctacttcctgttgttcgtcggcgtgtgcacgtggtgggcctgccactttccc
atcagccacctgggcttcaacgctttgtgtgtgatggtgggcttcttcacagctggtcat
ctggtctgcctttatctctaccagagcccttttgctcagggaatcttccccccagccagc
ctgtgggccagactgtttggcctgaaggatatcattaggcctggcaactgctcctcctat
tcctcccatgacctcatcctcaacacagagcatgactggccagtctacgtcaaccccggg
atccttcttctcctctatatcactgtggcgattgtcctgaagatcagtggtcatggcggc
cctgacaagcatgaagaaggcagactgagtgccagagacgtgctgccaggtggaggagag
gaggtggaactgcgtccctggggtccagagagacaaagcactgaggatgacaccaaggtg
gaaagagacagaaagcatactcaaatgctgctctccattggtgagtcaccgacgactgaa
tcagagggagccaactctcatgtgaccaacggctccagccgacaagatttaggcctcggt
agttccctgcctgctcagcatggagacagccctcttttcttggtgggccgcatggtcatg
gagcagagctacatctgcgctctcatcgccatgatggtgtggagtattacataccacagc
tggctgacctttgtgctgctgctgtgggcgtgcttcatctggatgatgcgggcacgccgc
cacttcgccacactctgctcccccttcatcctgctgtacggcctggcgctgtgcggcctg
cagtacgtgtgggccatggagctggagcccgagctgccccagcacgtgggcaccatgagc
ctccgtcagctgggcctggaccgtgcccaatacccctgcctgcgcctgggtgccatgttg
ctgtacaccctgaccttctggctgctcctgaggcaatcagtgaagaacaacttcagcaag
aagaagagcatcactgcccctctcacagaggtgacaactggtgagggcatcgggcaaaat
gagtcggtcctgaaggtcctcggaggcatggtgatgagtttatacgccaagtactggatc
tacgtatgcgggggcatgttcatcatggtcagcttcgctggcaagcttgtgggctacaag
atcgtctacatgctgctgttcctgctctgcttgtgtgtgtatcaggtgtattactccctg
tggagaaggcttctgaaggtcttctggtggttggtggtggcgtacaccatgctagtgctc
atcaccatctacaccttccagtttgaggatttcccggactactggaaaaacttcactggc
ttcacagaagagcagctggcagacatcggcctggagaccttcgccctgtcggagctcttc
tccagcatcctcatcccgggcttcttcctgctggcctgcatcctgcagttacactacttc
caccggcccttcatgaggatcacagacctggaccacgtcagccccatccacaggaagagg
aacactccgaggcctgaggtggtgcggggtacagacggcgtgggctttgaggaggaggag
ctcgtcacggatctcggagacgatgaagagctggaggatgacgagatgatacccagtaag
tgggggctggtgatggaccggctgatagtgctgtttgggaagttcgacgacacgctgagc
catatccaagccttcatctggaggctgctggagctgcacatcctcaagatggtcgccttc
tgcgtggtgtgggtggcactaggagagccctccgtaatgaacctggtgctggtggtgctg
tggtccttcgccatgccgtacgcacgcttcagacacatggcctcttgcctctccaccgcc
tgggtgtgtgtcatcatcgtctgcaagatgctctaccagctcagcattgtcaaccccatc
gagtactccaacaactgcactctgcctctggccaacgagacgaatcttcatctggaggag
atgcagaactccatactgtacaaagctcctgtggatccagccaactggtttggcttcagg
aaagatgccacagtcttgggttacattaagaatcacctcctggtgttgatgctgctagtg
ttcgaggtaacggtgtaccggcaccaggcccatcactacaaacagctgcagagatcccca
cccaacatccccaagctcttccccaacgccacacgcgacaccttagaccagagcctgttg
tcttgcatcaagtacctgctcagctacagcttctacaagtttggcctggagatctgcttc
ctgatgacagtgaacgtgattggccagcgcatgaacttcctggtcatcgcccatggctgc
tggttggtcgccatgttggtgcgaaggcgcagggcggccatcgccgagatttggcccaag
tactgcctgtttctggcgattttcaccatttaccagtacatcctgtgcgtgggcatcccc
cctgctctctgcatcgattatccctggcgctggagctcgacggtcaccattaactcagct
ctcattaagtggatctacctgccagacttctacactatccccaactccaagaacctcatg
gcggacttcctcctgctgatgtgcgcctcacagcagtggcacgtgtttgagaacgagaag
aaggaggagtggatggtgctgggaggggagaacaaggacaaccccaaccctatggatggc
gtccccttcaacccagcgcccaacttcatcaactgcaggtgttacctggacatggccaag
gtgctggtgttccgctacatgttctggttcgtgctggcggtggtgtttgtgacgggggcc
acgcgcatcagcgtgttcggcctgggctacctgatggcctgctttttcttcctgctgttc
ggcacacagctgctggccaagaagtcccacacgcgcctgacgctctgggactgcctcatc
atgtacaacgtgggcgtcatcatctcgaagaacctgctctcgatcctggcttgcgtgttt
gtagcagaaatgcagaagaacttctgttgggtgatacaactcttcagcttggtctgcact
gttaaaggctactatgaccctaaggaggtgagcgataaggagtgtattctgccggtggag
gaggctggcatcatctgggacagcatctgcttcttcttcctcctgctgcagaggagagtg
tttctcagcttctacttcctgcacgtgacggcagacatgcaggcgtccgcccgccaggcc
tcccgaggttttgagctcttcagagccactctcaagaaaaacatgaagttccaccagaag
gctgagaagaagtccttgcaacagctcaaacgatcgatggagcgcattcgatctaaacag
cagaagtacaagggagggcgcaaggcctcaagctccaaagaggggaaggcatcggactcc
caagaggaaaagaaagagaggaagagctcgaagaagaaatggcagcggccctggatggac
cacgcaaccgtgttgcactctggagagtactacctgtttgagtcggacagtgaggatgag
gaggagctcttctctgaggagcagaagccccccagacagtctgcatttcagctggcctac
caagcctgggtgacgagtgccaaggaggcgctgagggagcgtcagcagaggcagaaggag
cagaggaggctggagagagagaggagacagcaagccagcctccaggcggcctcgggtgat
ggagaagagcctgtctttgaggaaggaacgtcccaggatggggagctggaggaagaagga
gaggagtcagggagtcgaagtgacatggtacagcggatcctggacatcctgaggttcctg
cgggtactgttcctggccatggtggacggtgtgacgctgtggctcaacatgctcactaag
cagtatgtggacacctccaccgtcctgtgcaatgagcgctacatgatcatccacaacatc
agccagggcccgagggagcccctggatgaccagctgtctcagggcagcgagagccccact
ctggagacgtgtctggacgagacggagaccgaccagctgcacagcagcggcgccatcagt
ggagcagagctggaggacattgagctggaccactccaccccccgggccagcgcctacagc
gccaccctgtgccccgagcccccacaggagctggaggtgttgccatggccggaccgacac
cagcgccactcccgcaccgccagcgagatgctgactgacagggtattcttcgtggaggag
ctggtccagagctctgagttctactcgtctcagaaccggctgctcaagctgctcttcgcc
ctctacagcctgctggccgccaactcggagctggtgtgctacttaattatcgtgctgaac
aacgtggtgacggcctcggtcatctcgctggcgctgcccatcctcatcttcctctgggcc
atgctggccgtgccacggcccagcaagagattctggatgaccgccatcgtctacacagag
gtgatggtggtggtgaagtacctgttccagtttggcttcttcccctggaacagtctgtat
gagatgcggctgaacgaggacaagccctacttccctccgcgcatcctgggcctggagaag
tctgacaactacatccgctacgacctgctgcagctgctggccctgttcttccaccgctcg
ctgctgatgaaatatgggctgtgggatcaagagggacccctggaggagaagagcccccag
tccgctgaggtacagacgaagagggaggatgaagaggagtgtcggcccagtcacacgccc
agcctcacagaactggaggacggggccgcagagaccccccagcgactggagtctgagcct
gagcctctggacacccagcccaccccagagcccacgcctgaacccccccctgcctccccc
acagagcagggtgccgggaagaagggcggccttctgagattccgcaggaagaaaacctct
gggaaaggtggtgctgagagcaaagagcccaagaagaaatccaaggggaagcgcagagag
gcgactagcagaaaactgaaagctgttgggttcaaaatcaaagaactggtcatttctgca
gtgcagaatatctacagacccacgtatggattcttccgaaacatcctgcacgctgagtac
caggccaccacagacgtctatgctcttatgttcctcacggacatggtggacttcatcatc
attgtgtttggcttctgggcttttgggaaacactcggctgcagctgacatagcctccacg
ctgcaagatgaccaggtgcccgaggccttcctggtcatgctgctcatccagttcagcacc
atgatcatcgaccgggccctctacctgcgcaagaccgtcctgggcaagctcatcttccag
atcattctggttttcggcatccacctgtggatgttcttcattctgcctgcagtcactgag
aggatgtttaatcagaactttgtggctcagctctggtactttgtcaagtgcatctacttc
accttgtcggcctatcagatccgctgtggctaccctacctgcatcctgggcaacttcctc
accaagaaattcaaccatctcaatctcttcctcttccaagggttccgtctggttcccttc
ctggtggagctgcgagcggtgatggactgggtctggactgacaccacgctgtccctctcc
gactggatgtgtgtggaggacatctacgccaacaccttcatcatcaagtgtagccgggag
acagagaagaaatacccacaacccaaaggacagaagaagaagaagattgtgaaatatgga
atgggcggactcatcattttcttcctgatttgcatcatctggttcccactgctcttcatc
tcattggtccgatcggtggtgggcgtggtcaaccatcccatggacgtcactgtcacagtt
aagctggggggttatgagcctcttttcaccatgagcatccagcagcagtctatccagcct
ttcatggaacatgactacgcgaaactcaccaagcactttgggaataacgcaggggccatg
cagttcattacactgtacagttttgaggacatcgtgacggctaacatcgagggcagctcg
ggctccgtgtggcgcatcagcccgcccagcagacaggagctcatcaaggagctgctgggc
actgccgagatgaccctgcgcctggcctggaacttccagagggacttggggaagggtggt
actgtggagaacacctttgacaaacactctatccagctggagccaggggacccagtgaga
gcagacctggcatcgctgctcggaggcaaccgcacagagcctgtgctggttccccgcatg
ttccctaactacatccgagctcctaacggggctgaggccaaacctgtgagccagctctat
gaaggtgatgaagaggggtatcaggaggtgacgctgtctctgatgagtggaggagcacag
gagtggtgggacatcagcatagcgggctgcgacccctccaccaaggcctgtggggttctg
cctatggtcatcttcaacgacaaagtcagcccccccagcctgggcttcctggcaggttac
gggatcatgggtctgtacgtgtccgtggtgctggtgattggcaagtttgtgcgcggcttc
ttcagcgagatctcccactccatcatgttcgaggagctgccctgcgtggaccgcatcctc
aagctgtgcacggacatcttcctggtgcgcgagacaggcgagctggagctggaggaggag
ctctactccaagctcatctttctctaccgctccccagagaccatgatcaagtggaccagg
gagaaggacaaggactag
DBGET
integrated database retrieval system
