Clupea harengus (Atlantic herring): 105892895
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Entry
105892895 CDS
T09045
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04371
Apelin signaling pathway
char04514
Cell adhesion molecules
char04520
Adherens junction
char05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105892895
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105892895
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105892895
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105892895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105892895
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105892895
04090 CD molecules [BR:
char04090
]
105892895
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105892895
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105892895
CD molecules [BR:
char04090
]
Proteins
105892895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
GspA_SrpA_N
TM_ErbB1
Big_13
Big_9
BACON_2
Motif
Other DBs
NCBI-GeneID:
105892895
NCBI-ProteinID:
XP_031425138
Ensembl:
ENSCHAG00000023677
UniProt:
A0A6P8F9D1
LinkDB
All DBs
Position
6:complement(19767269..19779068)
Genome browser
AA seq
896 aa
AA seq
DB search
MEVYRYLRVGAIILVLQALLYAVSEHTPCTPGFDSELYIFKVYRVNLHIGRRLGKVVFND
CTGRTQTVFNSVDTRFKVDMDGTVKLKRQVTLHDGHKRFSVHAWDSQGRKHTVALRVELD
QPRHNQHHHLHHPHQVDLLQPTQPNVTEAVPTVPVLLFPKSFGGLRRRKRDWIIPDIKQA
ENSRGPFPEILVQIKTSHSKELTVIYSITGAGADQPPVNLFTIDAETGTLYITQPLNREE
KAQYLLFAHAVSVGGSKAEEPMELKVIVIDQNDNKPVFAQNPFLGSVAEASKIGTEFIEV
VATDADEPKNANSDVRYQILSQDPLVPNNVFSINPVTGKIMVNSAGLDKEKNSVYTLEIQ
AADMEGTGLTAFCKAIITVTDSNDLAPQFEQLLYTVSVPENKVGEIVVKMHVTDGDDPNT
PAWATKFKIISGDSGGMFSITTGPNKQEGIITTAKPLDFEAISKYTLVVAVENEIDFVMP
LPTSTAQVVVNVVDVNEAPFFSPAEKRISQPENVPKDTNLVLYSASDPDTAKNQKLTYKV
ISDPAGWLSVVKETGMIQVKSDMDRESIFVKDGQYKALILAMDDDIIPATGTGTLIIQLD
DVNDNAPAIVEMEVKFCNDETVPVLLTVIDKDDVGNGAPYRVELKGESASNWTARMNDTK
TGIILKMKPKLKEATYSVRLTVSDNHGLARISTVEATVCNCKGATVECQNSDRINEGGIP
LPVILGILGSILALLLLVLLLFMYMRRKSNVKKDPLLPEDDLRDNIYYYDEEGGGEDDQD
YDLSVLHRGLDNRPEIFRNDVIPTFMPAPQYRPRPTNPEDIGNFIDDNLKAADDDPTAPP
YDSLLVFDYEGTGSEADSLSSLNSSSSGDDQDYDCLNEWGARFKKLADMYGGGEDE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttataggtacttgcgcgtgggagctattattctcgttctccaggcactcttg
tatgcagtttctgaacatacaccatgcacaccgggctttgattcagagctctatatattc
aaagtctacagagttaatcttcacattggcaggaggcttggtaaagttgttttcaatgac
tgcacaggccgcacacaaactgtcttcaactcggtggatacgcgatttaaagtggacatg
gatggaacggtgaagctgaagagacaagtgactctgcatgacggacacaagaggttttct
gttcatgcgtgggactcccaaggcagaaagcacacagtggctctgcgtgtggagcttgac
cagcctcgccacaaccaacaccatcacctgcaccacccccaccaggtggacttgctccag
cccacacagcccaatgtgactgaggcagtcccaactgtgccagtcctgctgtttccaaag
tcatttggtggtctaagaaggaggaagagggattggatcatccctgacatcaaacaggct
gagaacagtagaggcccttttccagaaatattggtgcagattaaaaccagccattcaaag
gagctgacggtcatttacagcattactggtgcaggggcagaccaaccccctgtgaacctt
tttacaattgatgcagaaactggaacgctttacatcactcagcctttgaacagagaagaa
aaggctcaatatttgctctttgcccatgcggtgtcagttggtggttctaaagcagaagag
cccatggaactcaaagtcattgtaatagaccaaaatgataacaagcctgtctttgcacaa
aatcccttcctgggaagtgttgcagaagcatcaaaaataggcactgagtttatagaagtt
gttgccaccgatgctgatgagcccaaaaatgcgaactctgacgtcagatatcaaattctg
agtcaagatccacttgtgccaaacaacgtcttctccatcaatcctgtcacaggaaaaatc
atggtgaactctgcagggcttgataaagagaaaaactcagtgtacactttggaaatccaa
gcagctgatatggaaggaacgggtctaacagccttctgcaaagcaataatcactgtaact
gacagcaatgacctggctccgcagtttgagcagcttctgtacacggtgtctgtccctgag
aataaagtgggcgaaatagtggtgaagatgcatgtaacagacggagatgatcccaacacc
cctgcctgggcaacgaaattcaagatcatcagcggagacagtggggggatgttcagcatc
acgacaggccccaacaaacaggagggcatcatcactacagccaagcctctggactttgaa
gccatttccaagtacacacttgtggtagctgtggagaatgaaatcgattttgtcatgcct
ctgccaacatccactgctcaggtggtggtcaatgttgtggatgtcaatgaggctcccttc
ttcagtccagcagagaagagaatttcccagcctgaaaatgtcccaaaagacaccaactta
gtcttatactcagcctctgatcctgacacggccaagaatcagaaattgacgtacaaagta
atcagtgatccagctggttggttgagcgtcgtcaaggaaaccggaatgattcaagtaaag
agtgacatggaccgcgaatctatcttcgtaaaagacgggcagtacaaagctctcattttg
gctatggatgatgatatcatccccgccaccggcactggaactctcataattcagttggat
gatgtgaatgacaacgctccagcaattgtggagatggaggtgaagttttgcaatgacgag
actgttcctgtgctgctcacagtaatcgataaagatgatgtagggaacggtgctccttac
cgcgtggagctgaaaggggaatcggccagtaactggactgcgcggatgaatgacacaaaa
actggcattatactcaaaatgaaacccaagttgaaggaagcgacatacagtgtacggtta
acggttagtgacaaccatggcttggcccgaataagcactgtggaagccacagtgtgtaac
tgcaagggagccacagttgaatgccagaatagcgatcgcatcaacgaaggtggaattccg
cttcctgttatccttggaatcttgggttccatcctggccctgctattgttggtgctgctc
ctgttcatgtacatgaggaggaagagtaatgtgaagaaggatcctctccttccagaggac
gacctcagggacaacatctactactatgatgaggaaggtggaggagaagatgaccaggat
tatgatttgagtgtgctgcacagaggcctggataaccggcctgaaatatttaggaatgat
gtgattcccaccttcatgcctgcaccacagtaccgtccccgccctaccaaccctgaggat
attgggaactttatcgatgataatctgaaggcggctgacgatgaccccacagccccaccg
tacgactcgctgctagtgtttgactacgagggcacgggctccgaggctgactccctcagc
tccctcaactcctccagctccggagatgaccaggactacgactgtctcaacgagtggggc
gcacgcttcaagaagctggctgacatgtatggaggaggagaggatgaataa
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