Clupea harengus (Atlantic herring): 105892912
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Entry
105892912 CDS
T09045
Symbol
galns
Name
(RefSeq) N-acetylgalactosamine-6-sulfatase
KO
K01132
N-acetylgalactosamine-6-sulfatase [EC:
3.1.6.4
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00531
Glycosaminoglycan degradation
char01100
Metabolic pathways
char04142
Lysosome biogenesis
Module
char_M00077
Chondroitin sulfate degradation
char_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105892912 (galns)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105892912 (galns)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.4 N-acetylgalactosamine-6-sulfatase
105892912 (galns)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfatase
Sulfatase_C
Phosphodiest
SGSH_C
Motif
Other DBs
NCBI-GeneID:
105892912
NCBI-ProteinID:
XP_012674684
Ensembl:
ENSCHAG00000022371
UniProt:
A0A6P3VLE3
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Position
6:19625155..19646281
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AA seq
522 aa
AA seq
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MDAARIHIFTSLFGLVCSLWTGDDLSASTPNIIIMLMDDMGWGDLGVFGQPSKETPNLDR
MAAEGMLFPNFYTANPLCSPSRAALLTGRLPVRNGFYTTNAHARNAYTPQEIVGGISKEE
ILLPEMLKKKGYVSKIVGKWHLGHRTGHLPLEHGFDQWFGAPDCHFGPYDGSSRPNIPVY
NNSEMVGRYYEEFQIDRKTGESNLTQIYLQEGLGFIFTQALARRPFFLYWAPDATHAPVY
ASKDFLGKSQRGRYGDAVMELDYSVGQILDWLSILGIDKNTFVFFSSDNGAAVMSGPMQS
GSNGPFLCGKETTFEGGMREPAIARWPGHIPAGMVSHQLGSVMDLFTTSLALAGLAAPDD
RVVDGLDLRPVLFNNSLIDRPIFYYRGNEMMAVRLGPYKAHYWTWSNSWEEFNQGVNFCP
GEEVAGVTTHTQEEHTMQPLIFHLGRDPGEKYPISVLSREYQVVLKHISPVVEEHKLKLV
PGQPQLNMCDLAVMNWSPPGCKKLGKCLTPPKSQPWKCVWPH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcgcgcattcatatcttcacatctctctttggtttagtatgttctctctgg
accggggatgacctcagtgcgtcgactccaaacattatcatcatgctcatggatgatatg
gggtggggtgacctaggtgtatttgggcagccctccaaagagacccccaaccttgatagg
atggctgccgaggggatgctgttccctaacttctacactgctaacccactctgctcacca
tccagagcagcactattgactggaaggctacctgtcagaaatggattctacaccacaaat
gcccatgcaaggaatgcgtacacgcctcaggagatagttgggggaatctcaaaggaagaa
attctcctgccagagatgctgaaaaaaaagggctacgttagcaaaattgttggcaagtgg
caccttggtcacaggacaggccatctgcctctggagcatgggtttgaccagtggtttggt
gcacctgactgccacttcggtccctacgacggcagcagcaggccgaacatcccagtctac
aacaactcagagatggtcggaaggtattatgaagaattccagattgaccggaaaactggt
gaatcaaaccttacgcagatctacctgcaggaaggactgggcttcatcttcacccaagcc
ttagcgcgacggcccttctttctgtactgggctccagatgctacccacgcgccagtgtac
gcctcaaaggacttcctcgggaaaagccagagaggacgctatggcgatgccgtgatggag
ctggattacagcgtggggcagatcctggactggctcagcatcctcggcatcgacaagaac
acctttgtcttcttctcctcggacaacggggctgcagtcatgtccggacctatgcagagt
ggcagtaatggacctttcctctgtgggaaggagaccacgtttgagggtggcatgagggag
ccggccattgcccggtggcccggacacatccccgctggcatggtgagtcatcagctgggt
agtgtaatggatctgttcaccaccagccttgctctggccggactggcagctccagacgac
cgggtggttgacggactcgacctgcggcccgtcctcttcaacaactccctcatcgacagg
cccatcttctattaccgtggcaacgagatgatggctgtgcggttggggccctacaaggcg
cactattggacgtggagcaactcgtgggaggagtttaatcagggcgtaaacttctgtcct
ggggaagaggtggctggtgtcaccacacacacccaggaggagcacaccatgcagcctctt
atcttccacctaggacgggacccaggggagaaatatccaatcagtgttctgagcagggag
taccaggttgttttgaaacacattagcccagtagtagaagaacacaagctgaagttggtg
cctggccagcctcagctcaacatgtgtgacttggctgtcatgaactggtctcctcctggg
tgtaagaagctggggaagtgcctgacgccccctaagtcacagccttggaagtgtgtttgg
ccacactga
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