Clupea harengus (Atlantic herring): 105892923
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Entry
105892923 CDS
T09045
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2
KO
K27096
liprin-beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892923 (ppfibp2a)
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105892923 (ppfibp2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
FxsA
WHEP-TRS
FPP
LRRFIP
Motif
Other DBs
NCBI-GeneID:
105892923
NCBI-ProteinID:
XP_031425095
Ensembl:
ENSCHAG00000015678
UniProt:
A0A6P8FNT3
LinkDB
All DBs
Position
6:17791512..17831199
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AA seq
1048 aa
AA seq
DB search
MKSLNSTRRLKDLGREHQTIDLRMHRSNSSLESERLRPRKYPIAMASDASHMLETALEQM
DDIIAGSRALVPLGEFSSALVELPGPVTYSAPLRVLQLTEELREVLELQDSREDADSLRR
QIPSDTAYMLLLWLTQGLAVNLQSFGNNESYQERLARLEGDKESLVLQVSVLTDQVEAQG
EKIRDLEYSLEEHQHKLNNTEEMLQQELLSRTSLETQKLDLMDEVSYLKLKLASMEKQNH
NVERQHKAESVVNLISELQEQMCRIQQELSSKVKEKKEPAEREAREGHGGGPAEAPACGA
EETRSASVASSPGASDTEQSCHCGNESGLLHELRLMKDKVEELEDEKVQYERKLKATKVE
ISNLQQILLAKNTEIENLQAQLLARSPVSMDSAEREEIYRRRLNNKHQELQRLRSGMESL
LAANDEKDRRIEELTILLSQCRQFRDTSAAVPVSRERALTCCSEDGRMNGDVRMRALSLK
THSESSSGSSPVLTSPLSNQREAESRSQPRLISSSMEDLQSGLAKQVTGPSVEPVVSTEV
RLADNKSQTLPGKLALMEQNRESEGSDTSAQKSPDESEDGDFNLNLCRSASAPALGKQDF
FGIGKTEKMEDTTSSDVSPMSSGADSGQQSPVSQENVKNAKSIRKIWGKIRRTQSGGLNG
VDLEPSEFRRGGLRATAGPRLARTPDSGSSVRDKNTPFSKWTKEQVCGWLEDYGLGHYVN
LTRQWVESGQTLLSATPQDMEKEMGIKHPLHRKKLQLAVRSFSNKTMEKSSELDHIWVTR
WLDDIGLPQYKDQFHEARVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNKFDP
HCLRRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFTS
DTLAMLLNIPPQKTLLRRHLATNYSALVGAQAQQEKREYANATGHTPLTTTAKVRPKKLG
FTHFSHLRKRRQDDSADYICPIDTASPSALNGSPHRPYAGFRGLSPVLDRDSDRMEQECT
EELISVSSVGDREAQVSDSVPLHGATIG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtctaaactcgaccagaagactcaaagatctcgggagagagcaccagactatc
gatttgaggatgcatcgaagcaattcgagccttgagagtgaacgattgaggccaaggaaa
tatcccattgccatggcttcagatgccagtcacatgttggagacagcgctagagcaaatg
gatgacattattgccggctccagggcgctggtccctctgggagagttcagcagtgctctg
gtggagctgccgggtcccgtgacgtattctgcccctctgcgagtgctgcagctgaccgag
gagctccgggaggttctggagcttcaggacagtcgagaggacgcagactcactgcggagg
cagatccccagcgacactgcctacatgttgctgctgtggctgacccagggcctggcggtg
aacctgcagtcatttgggaacaatgagagctatcaagaacgcctggctcgattagaaggg
gacaaagagtcgctcgtactccaggtgagtgtgttgactgaccaggtggaagcacagggg
gagaagattcgggacctggagtactccctagaggagcatcaacacaaactcaacaacact
gaggagatgctgcagcaggagctcctgagcaggacctctctggagacccagaaactggat
ctgatggatgaggtgtcttacctgaaactgaaactagccagtatggagaagcagaaccat
aatgtggaacggcaacacaaagcagagagtgtagtgaatctgattagtgagctccaggag
cagatgtgtaggatccagcaggaactcagcagtaaagtgaaagagaaaaaagagcctgcg
gagcgggaggccagggagggccatggcggtggcccagcggaggcccctgcctgtggggcg
gaggagacgaggagtgccagcgtggcttccagccccggagcttcagacacagagcagagc
tgccactgtggaaatgagagtggcctgctgcacgagctgaggcttatgaaggacaaggtg
gaggagctggaggatgagaaagtccagtatgagaggaaactcaaagctacaaaggtagaa
atatccaacctccagcaaatcctccttgccaagaacaccgagattgagaacctgcaggct
cagctccttgccagatctcccgtgtccatggacagtgcagagagagaggagatatacaga
agaagacttaacaacaaacatcaggagttgcagaggttgagatccggaatggagtcactt
cttgcggcaaacgatgaaaaggataggcgaatcgaggagcttaccatcctgttgagccag
tgcaggcagttcagagacacctcagcagctgtaccagtctccagggaacgagctctgaca
tgctgtagtgaggatggccgcatgaacggggacgtgaggatgagggcactctccttgaaa
actcactctgagtcctccagtggctcctctcctgttctcacgtctcctctgtccaatcaa
agagaagctgaatccaggtctcaaccaagactgatatcatctagtatggaagatttgcag
agcgggcttgcaaagcaagtaactggaccatcagtagaacctgtagtatcaacagaggtt
cgactggcagacaacaagagccagacgttgccagggaaactggctctcatggagcaaaac
agagagagtgagggcagtgacacctcggctcagaagtcaccggacgagagcgaggatgga
gacttcaacctaaacctttgcaggagtgccagtgctcctgctttaggaaaacaagacttc
tttggtattggaaagactgagaaaatggaggacactacatcctcagatgtctcgcccatg
tcgtcaggggcagactctggacagcagtcacctgtatcccaggaaaatgtcaagaacgcc
aaaagtatacggaaaatatggggaaaaatcaggaggacccagtcggggggcctaaatggg
gttgaccttgagccatcggagttccggagaggaggactgagagccacagccggccctcgc
ctggcccgcactcctgactcgggcagctcagtccgtgacaaaaacacacccttctccaag
tggaccaaagagcaagtgtgtggttggctggaggactacgggcttggccattatgtgaac
ctcaccaggcagtgggtagagagtggacagaccctcctctcagctacaccgcaggacatg
gagaaggaaatgggcattaagcacccactgcaccggaagaagctacagctggccgtacgg
tccttcagcaacaaaaccatggagaagtcctccgaactggaccatatctgggtcacacgg
tggctggatgacattggcttgccgcagtataaagaccagttccatgaagctcgcgtggat
ggcaggatgttgcagtacctgactgtgaacgaccttctgttcctgaaagtcaccagtcag
ctccatcatctcagcatcaagtgtgccatccacgtgctccacgttaacaagtttgacccc
cactgcctgagacgcaggccaggcgacgagaataagacatctccctcagaggtggtgcag
tggtctaaccaccgtgtgatggagtggcttcgctcggtggacctggcagagtatgcaccc
aatctgagaggcagcggagtacacggaggcctaatcatcttggagccgcgctttacctcg
gacactttggccatgctgctcaacatccccccgcagaagaccctcctgaggcgccaccta
gccaccaactactcggcgctggtgggtgcccaggctcagcaggagaagagggagtatgcc
aacgccacggggcacacacctctcaccacaacagccaaagttaggcctaagaagctggga
ttcacacacttcagtcacttacggaagaggcggcaggacgactcggcggattacatctgc
cccatagacacagcctccccgtccgccctcaacggctctccgcacaggccctacgctggc
ttcaggggcctcagccccgtcctcgacagagactcggacagaatggagcaggagtgcact
gaagagctcatttctgtcagttctgtaggtgatagggaggcacaggtgagtgacagtgta
ccactacatggtgccaccattggataa
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