Clupea harengus (Atlantic herring): 105892950
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Entry
105892950 CDS
T09045
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105892950 (gtf3c2)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
105892950 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
WD40_Prp19
DSE1_N
Beta-prop_VPS8
SHKBP1_KCTD3_C
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
105892950
NCBI-ProteinID:
XP_012674732
Ensembl:
ENSCHAG00000008948
UniProt:
A0A6P3VL03
LinkDB
All DBs
Position
15
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AA seq
938 aa
AA seq
DB search
MASGTHKLGRCRNRVMGLPKGEDLVQPAGRRRGQSANKSSLSANGDSSKAPVKCESQAFD
SNLQEAELAAEVGSDMTNSTQGTGQDNCEKGIQSDSTLLTSEGSTNATPTKTKRKAHAWS
TGKRRRKQPAETSPKTPKAAPATPKAAVKRRRSAPQATSTPMGKIAAPLEAPSSPGTPEL
TLGGRPKRRAAKAAIEYLHSLVNSLNDTHADSQKTDDETDSAPSTKTKTKTPKKAATGRG
KKRKAPEPDSDPAEDSDFVPEGKEEDDDEEEDSEEVEDDDLDKDFSLQREPRKRGAGFLK
EFTKRSRPPQVVYGTASNGLPNRLMSPVWTAFPVHKEFRNDNLLPWVFPEWIPSLKDWQF
LATSEAEAYLPQETESPAFMLSREQLTKGNTLQRLKRFESMPYHGERWDATFFVGGPVWA
MEWCPCPDGSTGSQYVAMYCNRDMDSRHKVKSLHTGPGLLQIWDLGDLNYRTRPSREAQL
SYCLAQDEGCVWSLKWCPSGAWELPCTARKSPQMPRLGLLAAGCSSGRIVIYSLPHPDAL
LTHRRSQTDGEASQGPLICRVQPVLTLCLGSSSISGQCLTLDWMPVKPHNLLAAGFYDGM
VALWDLSTKSSLLRVRAPGKSPSIHPFHSFLAHDDVVRSVSWCRASGDHMVTAGDDRMTK
MWDLQRTHTPLCAFKRFLTTEAIWPLRWSGVLMSQECSFATHGQQGIHFVDSGFVGFKHL
FVLPRKATLWSLSLSEWLNSCVTADSIGEMVMVLIPTLGMTGINLKKTSDRRFPVYRGEM
VRFSPEAETERGEEDGDGGGGGVKDPEAEPNTYREAVKKYHIHFHDSDMRNFKGAASRPS
TKLMRSSEMKGAIKIDRMPLTSIHKVRINPNLVASTWVLSAGQSGLVRIHCLRCLQGSIM
EKLQRESEVQFSAMFPSQEDPDAATTVQSTTEGTVLVS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggtacccataagttgggcagatgcagaaatagggttatgggtttgcctaaa
ggagaggatctggtacagccagcggggcggcgacgtggtcagagtgccaacaagtcgtct
ctgagcgcaaatggggattcatcgaaagcgcctgtgaagtgcgaatcacaagcatttgac
agcaacctgcaagaggctgagttggcggcagaggtcggatctgatatgaccaactccact
caaggaacgggtcaagataattgtgagaaaggcatacaatcagacagcactctgctgacg
tctgaagggtccacaaatgcaacgccaacgaagaccaaacgcaaagctcatgcttggtct
acaggcaagcgccggaggaagcaaccagcggagacctcccccaaaacccccaaagctgcc
ccagctaccccgaaggccgcggtaaagagacggaggtcggccccacaggccaccagtacg
cccatgggcaagatcgcagcgccactggaggccccatcatccccaggcactccggagctg
acgctgggcggtcggcccaagaggagagcggccaaggccgcaattgagtaccttcacagc
ctggtcaacagcctgaacgacacccatgcggactcccagaagacagacgatgaaacggac
agcgctccaagcacaaagacgaagacgaagacgccaaagaaagcggcgacgggccgaggg
aaaaagaggaaggcccctgagccagacagcgacccggccgaagattctgactttgtcccc
gagggaaaggaggaggatgatgatgaggaggaggacagcgaagaagtggaggacgatgac
ctggataaggatttttccttgcaacgcgagcctcgcaaaaggggtgcaggatttctgaaa
gagttcactaaaagaagtcgacctccccaggtggtgtatggcactgcaagcaatggcctc
cccaataggctgatgtcccctgtgtggactgctttccctgtccacaaggaattccgtaat
gataacctgctaccgtgggtcttccctgaatggataccctcgctgaaggactggcagttt
ctggccacaagtgaggctgaagcatatctacctcaagagacggagtctccagcttttatg
ctttcacgagagcaactgactaaaggaaatacccttcagcgactgaagagatttgagtcc
atgccctaccacggtgagcgttgggacgccaccttctttgtgggtggccctgtgtgggcc
atggagtggtgcccctgccccgacggctccactggcagccagtacgtggccatgtactgc
aacagagacatggacagccgtcataaagtgaagagcctgcacacggggccgggcctgctg
cagatttgggacctgggagacctgaactaccgcaccaggccctccagagaggcccagctg
tcctactgtctcgcccaggatgagggctgtgtgtggagcctgaagtggtgcccctctggg
gcctgggagctgccctgcacagctcggaagagcccccagatgcccagactgggtctgctg
gctgctggctgctccagcggcaggatcgtcatttacagcctcccacatcccgacgccctg
ctgacgcacaggagaagccaaacagacggtgaagccagccaagggcctctgatctgtcgg
gtgcagccggtgctgaccctgtgtctgggctccagcagcatcagcggacagtgcctcacc
ctggactggatgccggtgaaaccacacaacctgctggcggccggcttctacgatggtatg
gtggcgctgtgggatctgagcacaaagtcctctctgctccgggttcgcgctccgggcaag
tctccctctatccacccattccacagcttcctggcgcacgatgatgtggtgcggtcagtc
agctggtgcagagcctctggtgatcacatggtgacagccggagacgaccgcatgaccaag
atgtgggatttgcagagaactcatacacccctctgtgcgttcaaacgcttcctgaccacc
gaggccatctggcccctgcgctggtccggcgtgctcatgtctcaggaatgttccttcgcc
acgcatgggcagcaagggatccattttgtggactcagggttcgttgggttcaagcactta
ttcgtgctcccgaggaaagccaccctttggagcctgtccctgtcagagtggctgaacagc
tgcgtgacggcggacagcattggcgagatggtcatggtcctgataccaacactgggcatg
accggcatcaacctcaagaagacctctgaccgcagatttccagtgtacaggggcgagatg
gtgcgcttcagtcctgaggcagagacagagaggggcgaggaggatggtgacggcggcggt
ggtggtgtgaaagacccagaggcggaacccaatacctaccgagaggcggtcaagaagtac
cacatccacttccatgactcggacatgaggaatttcaaaggcgccgcgagccgacccagc
accaaactgatgcgcagctcagagatgaagggggccattaagattgaccgaatgccactc
acttcaatacacaaggtgcgcatcaaccctaacctggttgccagtacgtgggtgctgtct
gccgggcagtcgggcctggtgcgcatccactgcctgcgctgcctgcagggctccatcatg
gagaagcttcagcgggagagcgaggtccagttctccgccatgttcccctctcaggaagac
ccggacgccgccaccactgtccagagcaccacagagggcaccgtactggtctcctag
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