Clupea harengus (Atlantic herring): 105892968
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Entry
105892968 CDS
T09045
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
105892968 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105892968 (psmc6)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
105892968 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
PRS7_OB
RuvB_N
nSTAND3
DUF815
AAA_14
Prot_ATP_ID_OB_N
AAA_7
Csa3_N
AAA_11
TIP49
AAA_lid_PRS2_C
AAA_33
RNA_helicase
bpMoxR
AAA_3
NPHP3_N
Mg_chelatase
AAA_18
DUF5906
AAA_28
AAA_24
TsaE
ATPase
NACHT
AAA_25
DUF3829_2nd
Occludin_ELL
AAA_17
Parvo_NS1
IstB_IS21
ATPase_2
DUF4140
COG4_N
Motif
Other DBs
NCBI-GeneID:
105892968
NCBI-ProteinID:
XP_012674755
Ensembl:
ENSCHAG00000006777
UniProt:
A0A6P3VLH4
LinkDB
All DBs
Position
15:complement(9792944..9797662)
Genome browser
AA seq
389 aa
AA seq
DB search
MADTREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGDMDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactagagagaagggtttgcaagactataggaaaaaattgttggaacacaag
gaaattgatggacgtttaaaagagttgagggaacagctaaaagagctgactaagcagtac
gaaaagtccgagaatgacttaaaggccttgcagagtgttgggcagattgttggtgaggtt
ctcaagcaactgactgaagagaaattcattgtgaaggcaaccaatgggcctcgttatgtg
gtgggatgccgcaggcagctggataaaactaagctgaaacctggcacaagagtggctctg
gatatgaccactttgaccatcatgaggtaccttcccagagaggtggatcctctggtatac
aacatgtctcatgaagacccaggcagcgtgtcatactcagagattggtggactctctgag
cagatcagggaacttagagaggtgattgagttgcctctgaccaatcctgagctcttcctg
agggtgggcatcatccctcccaaaggctgtctgctctatgggcccccaggcactggcaag
accctcttggcccgagcagtggccagccagcttgactgcaacttcctcaaggtggtgtcc
agttccattgtggataagtacattggtgagagtgcccgtctcatcagggagatgttcaac
tatgcaagggaccaccagccttgcattatcttcatggacgagattgacgccattgggggt
cgtcggttctctgagggaacctctgctgacagagagattcagaggacactgatggagctg
ctgaatcagatggatggttttgacaccctgcacagggtcaagatgatcatggccaccaac
cggccagacaccctggaccctgccttgcttcgccctggaaggctggataggaagattcac
atagagctgcccaatgagcaggctcgtttggacatcctgaagatccactctggtcctatc
accaagcatggagacatggattacgaagccatcgtgaagctctctgatggattcaatgga
gctgatttaagaaatgtgtgcacagaagcaggtatgtttgcgatccgtgcggaccatgag
tatgtcactcaggaggacttcatgaaggctgtccgcaaggtggccgactccaagaaactg
gagtccaagctggactacaagcctgtataa
DBGET
integrated database retrieval system
