Clupea harengus (Atlantic herring): 105892999
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Entry
105892999 CDS
T09045
Symbol
spock1
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
char00535
]
105892999 (spock1)
Proteoglycans [BR:
char00535
]
Extracellular matrix (ECM) proteoglycans
Others
105892999 (spock1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
105892999
NCBI-ProteinID:
XP_031443032
Ensembl:
ENSCHAG00000004792
UniProt:
A0A6P8H5Q4
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Position
20:complement(11955081..12159383)
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AA seq
469 aa
AA seq
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MTMLYYLLALVPVLLGADARRGETAFGNNNNNGNPLDNDKWMSTVSQYDKDRYWNKFRDE
VEDDSRSWAPSKPADPDTKARVGRHEEPGTKSHSAPGRWKIDDGGLDVTKDPCLKVRCPP
HKVCISHDYQTAICTGHKQAPHSSVKSRRGSVTHKQHKMVEVHHGKCSPCPVFHPTPVCG
SDGHTYTSKCKLDFQACTSGKSLLVKCEGPCPCLPGQELIKHHSEKAACTDSDLRSLASR
LKDWFGVLHQDANRDLKTSSDSTQGHFDTSILPICKDSLGWMFNKLDMNYDLLLDHTELS
AIYLDKYELCMRPLFNSCDSFKDGKLSNNEWCLCFQKPEGLPCQTEMNRIQNQSRRKPLL
GAYIPRCTDEGYYKATQCHGSQCWCVDKYGNEIAGSRKQGNPTCAEEDQETSGDFGSGGA
VILLDDQEDEEETPRVRQKERRGRLHPRGTIEDDEDEGDDKDDEIGYLW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgctttactatctgttggctctcgtgcctgtgctgctgggcgcggacgccagg
cgcggggaaacggcgttcgggaacaacaacaacaatgggaacccattggacaacgacaag
tggatgagcaccgtgtctcaatacgacaaggacagatactggaacaaattccgagacgag
gttgaggacgactccaggagctgggctccaagcaagccggcagatccagacacaaaggcc
cgcgttgggaggcatgaggaaccaggaaccaaaagccactcggcaccagggaggtggaag
atcgatgatggaggtttggacgtcactaaggacccctgcctgaaggtgcgctgcccaccc
cacaaggtgtgcatcagccatgactaccagacggccatctgtaccggtcacaagcaggcg
ccccacagcagtgtgaaatccaggagagggagcgtgacccataagcagcataagatggtt
gaggtgcaccatgggaaatgtagtccctgccctgtctttcaccccacccccgtgtgtggc
tcagatggacacacctacacatccaagtgtaaactggacttccaggcctgtacctctggc
aagagcctgctggtgaaatgtgaggggccctgtccctgtcttcctggccaggaactcatc
aaacaccacagtgagaaagctgcctgtacagacagtgacctgcgcagcctggcctcccgg
ctcaaggactggtttggagttctgcaccaggatgctaacagagacctaaagacgtctagt
gacagcacacaaggccactttgacaccagcatcctgcccatctgcaaggactcgctgggc
tggatgttcaacaagctggacatgaactacgacctgctgctggaccacaccgagctgagc
gccatctacctggacaagtacgagctgtgcatgcggccgctcttcaactcctgtgactcc
ttcaaagacggcaagctctccaacaacgagtggtgcctctgcttccagaaaccagagggt
cttccctgccagactgaaatgaacaggattcagaatcaaagccgacggaagcccctatta
ggggcctacattcccaggtgtactgacgagggctactataaggccacacagtgccatggg
agtcagtgctggtgtgtggacaagtatggcaatgagatcgctggctcaaggaaacaaggc
aaccccacctgtgcggaggaggaccaggagacgtctggagattttggcagtggaggcgcc
gtgatcttactggatgaccaggaggatgaagaggagactccgcgtgttcgacagaaggag
aggcgaggaagactccacccccgtggcacaattgaagatgacgaggatgaaggcgatgac
aaagatgatgagatcggctacctctggtag
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