Clupea harengus (Atlantic herring): 105893069
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Entry
105893069 CDS
T09045
Symbol
sv2ba
Name
(RefSeq) synaptic vesicle glycoprotein 2Ba
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105893069 (sv2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105893069 (sv2ba)
Transporters [BR:
char02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
105893069 (sv2ba)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_4
MFS_1_like
Pentapeptide_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105893069
NCBI-ProteinID:
XP_012674864
Ensembl:
ENSCHAG00000004568
UniProt:
A0A6P3VL83
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All DBs
Position
20:13970261..13985981
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AA seq
694 aa
AA seq
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MDDPYQNNVPQQQEGGGETYPNYGEGQGQADGYGYQSDYPQQDEDARSDATEGGEGEEQM
YEGEYQNVPHPDEIKAARRAARAEARRKAKEADLEGEEEELPEQYECIMEDCGHGRFQWQ
LFTVLGLALMGDGVECFVVGFVLPSAEKDMCLSNAEKGMLGLLVYVAMMVGAVVWGGLAD
KLGRRQCLLYALTINCIFSFLSSFAQGYGFFLFFRMCAGIGIGGSIPIVYAYFSEFLQMD
KRGEHLSWLCMFWMCGGLYASFTAWGIIPHYGWGFSIGTEIQFHSWRVYVLVTLLPSLAA
LVGLFFMPESPRYLLENGRHDEAWMILRNMHDTNWRAKGEPERVFAVSQIKTPETQDDEF
IEIQSATGTAFQRFTVRHVTLIKQVMKNVMSLTAPELRLTALFLAIIWFTMSFSYTGLSV
WFPDMVKMMQFEEYESKTKLFHREKVERFHFNFTLANQLHKEGEYLHDRFTNIEMKSVKF
EDSLFENCYFEDVRSTSTYFENCTIKNTVFYNTDLWKEKFIDCKMHNNTFMHPKKGCHLN
FQEENDILIYMVSFLGSLAVLPGNIVSALFMDKFGRIKIIGASMLASAICSFFLFVCFNQ
GSLIFFQCLFFAISVAAWNGIEVITVEIFPSAKRGTAFGVLSAISKFAAILSSFIFGKFV
NITRIIPIILSFASLVCGGLLSQKLPETRELLLQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacgacccgtaccaaaataacgtgccccaacagcaggagggcggcggtgagacctac
cccaattatggcgagggccagggccaggccgatggctatggctaccagtcggactacccg
cagcaggacgaggacgcccgcagcgatgccaccgagggcggagagggtgaggaacagatg
tatgagggcgagtaccagaatgtgccccacccggacgagatcaaggcggcacgtcgggcg
gcacgggcggaggccaggcggaaggccaaggaggcagacctggagggagaagaggaggag
ctgccggagcagtacgaatgtatcatggaggactgcggccacggacgcttccagtggcag
ctcttcaccgtgctcggcctcgcactcatgggggatggcgttgagtgctttgtggtcggc
tttgtgctgcccagcgccgagaaggacatgtgcctatccaacgcggaaaagggcatgctg
ggtttgttagtgtacgtcgcgatgatggtgggcgcggtggtatggggaggcctggcggat
aaactgggccgacggcagtgcctactttatgcgctgacaatcaactgcatcttctccttc
ctctcctccttcgcacaaggatatggcttcttcctcttcttcaggatgtgtgccggcata
ggcatcgggggttcgattcccatcgtgtacgcatacttctctgagttcctgcagatggac
aagcgcggggagcacctgagctggctctgcatgttctggatgtgcgggggcctctacgcc
tccttcaccgcctgggggatcatccctcactacggctggggcttcagcattggcactgag
atccagttccacagctggcgtgtgtatgtgctggtcaccctgctgccctcgctcgctgcc
ctggtcggactgttcttcatgcccgagagcccacgatacctcctggagaacgggcgtcac
gacgaggcctggatgatcctgagaaacatgcacgacaccaactggagagccaagggcgag
ccagagagagtctttgccgtgtcccagatcaagacacctgagacgcaggatgatgagttc
atagagatccagagtgcgacaggcacggccttccagaggttcaccgtcagacatgtgacc
ctcatcaagcaggtgatgaaaaacgttatgtcgctgacggctcctgagctgcgtctgact
gcactgttcttggctatcatctggttcacgatgtccttcagctacacaggactctcagtg
tggtttcctgacatggtcaagatgatgcagtttgaggagtacgagtccaagaccaagttg
ttccacagagagaaagtggagcgcttccacttcaacttcaccctggccaaccagctccac
aaggagggagagtacctccacgaccggtttaccaatatcgagatgaagtcagtgaagttt
gaggactccctgtttgaaaactgttatttcgaagacgtcagatctacttccacttacttt
gagaactgcacaatcaagaatactgtcttctataacactgatttgtggaaagagaagttt
attgactgcaaaatgcataacaacacgttcatgcatccgaagaaagggtgccacttgaac
ttccaggaagagaatgacatcctcatctacatggtcagtttccttggcagcttggctgtg
ttgcctggcaacatcgtatcagcactcttcatggacaagtttgggagaatcaaaattata
ggtgcctccatgctggcctcggcgatctgttcgttcttcctcttcgtgtgcttcaaccag
ggatcgctcatcttcttccagtgcctcttcttcgccatcagcgtggctgcatggaacggg
atagaggtcatcacagtagagatcttcccatcagcaaagaggggcacggcgtttggggtg
ctgagtgccattagtaaattcgccgccatcctcagcagcttcatcttcgggaagttcgtg
aacatcacacggataattcccatcatcctctccttcgcctccctggtgtgcggcggcctg
ctgtctcagaagcttccggaaacccgggagttactccttcagtga
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