Clupea harengus (Atlantic herring): 105893085
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Entry
105893085 CDS
T09045
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X2
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04114
Oocyte meiosis
char04120
Ubiquitin mediated proteolysis
char04218
Cellular senescence
char04310
Wnt signaling pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105893085 (fbxw11a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105893085 (fbxw11a)
04340 Hedgehog signaling pathway
105893085 (fbxw11a)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
105893085 (fbxw11a)
04218 Cellular senescence
105893085 (fbxw11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105893085 (fbxw11a)
03036 Chromosome and associated proteins [BR:
char03036
]
105893085 (fbxw11a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105893085 (fbxw11a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105893085 (fbxw11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
EIF3I
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
Motif
Other DBs
NCBI-GeneID:
105893085
NCBI-ProteinID:
XP_012674880
Ensembl:
ENSCHAG00000002113
UniProt:
A0A6P3VKQ1
LinkDB
All DBs
Position
20:complement(11912302..11928573)
Genome browser
AA seq
527 aa
AA seq
DB search
MEPEMEDKTLELMNMTVMEPQNHSDELSPKKTTVFKLGNGVVSGSRKRPSQGNFEKEKDV
CIQLFDQWSEGDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENI
LSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNR
TPEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIIS
GLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNT
LIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC
LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV
FRLQFDEFQIISSSHDDTILIWDFLNVSANGQPEGRSPSRTYTYISR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaagacaaaacgctggagctaatgaatatgactgttatggagcct
cagaatcactcagatgagctttcgccaaagaagaccacagtgttcaagctcggtaacgga
gtcgtgtcgggctcccggaagcggccgtcgcagggcaactttgagaaggagaaggacgtg
tgcatccagctgtttgaccagtggtcggagggggaccaggtggagtttgtggagcacctc
atctcgcgcatgtgccactaccagcacggacacatcaactcctacctcaagcccatgctc
cagagggacttcatcacagcgctgccagcccgaggtctggaccacatagcggagaacatc
ctgtcgttcctggacgcgcgctcgctgtgctcggccgagctggtgtgtaaggagtggcaa
cgggtcatctccgagggcatgctgtggaagaagctgatcgagcgcatggtccgcacagac
ccgctctggaagggcctctctgaaagacaccagtgggagaagtacctcttcaagaaccgc
acaccagaagtcccgcccaactcctactaccactcactttatcccaaaatcatccaggac
atagagaccatagaggctaactggcggtgtggaaggcacaacctgcagaggatccagtgt
cgctcggagaacagtaagggggtgtactgccttcaatatgacgatgaaaaaatcatcagc
ggccttcgggacaactccataaagatctgggataagcaatctcttgagtgtctgaagatt
ctgacgggccacacgggttccgtcctgtgtctgcagtacgatgaacgggtcattgtcaca
ggctcatctgactccactgtcagggtgtgggacgtgaactcgggcgaggtgctcaacacg
ctcatccaccacaacgaggcggtgctgcacctgcgcttctgcaacggcctgatggtgacg
tgctccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatcagcctt
cgccgtgtgctagtgggccaccgcgccgccgtcaacgtggtcgactttgacgacaagtac
atcgtctccgcctcgggcgaccgcaccatcaaggtgtggagcaccagcacgtgtgagttt
gtgcgcacattgaacggccacaaacgaggcatcgcctgtctgcagtaccgggaccggctc
gtggtcagtggctcctccgacaacaccatcaggctgtgggatatagagtgtggggcgtgt
ttgcgggttctggagggccatgaggagctggttcgctgcattcgcttcgacaacaagcgc
atcgtcagcggagcatacgatggtaaaattaaagtgtgggacttacaagctgccctggat
ccccgggccccagccagtaccctctgcctgcgcacactagtggaacattcggggcgcgtg
ttccgcctccagtttgacgagttccagataatcagcagctcccatgacgacaccatcctc
atctgggacttcctcaacgtgtcggccaatggacagccagagggccggtcgccctcacgc
acctatacatatatctccagatag
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integrated database retrieval system
