Clupea harengus (Atlantic herring): 105893091
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Entry
105893091 CDS
T09045
Symbol
clpxa
Name
(RefSeq) caseinolytic mitochondrial matrix peptidase chaperone subunit Xa isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105893091 (clpxa)
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP100
105893091 (clpxa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Zn_ribbon_CLPX_N
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
Sigma54_activat
AAA_14
AAA_22
AAA_7
NACHT
Sigma54_activ_2
IstB_IS21
AAA_16
RuvB_N
nSTAND3
DEAD
TsaE
ABC_tran
AAA_25
AAA_18
AAA_23
MCM
Lar_restr_allev
T2SSE
AAA_28
PduV-EutP
ResIII
TrwB_AAD_bind
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
105893091
NCBI-ProteinID:
XP_012674887
Ensembl:
ENSCHAG00000010004
UniProt:
A0A6P3VM97
LinkDB
All DBs
Position
20
Genome browser
AA seq
627 aa
AA seq
DB search
MSCACTSAARLLLINSAQKGLSGSRVQLLSKRRPSGHEARLTRRIPVRSFSETSVYFASK
DSTTKNGTGEGGKKSLSDGSGKRSGSGTTGKGGSQLRCPKCGDLCTHVETFVSSTRFVKC
EKCHHFFVVLSETDSKKSLKEQETAAEAVKFAFQQKPPPPPKKIYAYLDKYVVGQSHAKK
VLSVAVYNHYKRIYNNIPPTTRKPTETEKHTSITPREIEIRRREDEYRFTKLLQIAGISP
HGNALGASVQQQGAQASAQEQRGGDVLDTTPTEIKLEKSNIILLGPTGSGKTLLAQTLAR
CLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYLVEKAQQGIVFLDEVDKIGSVPG
IHQLRDVGGEGVQQGLLKLLEGTVVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDR
IISRRKNEKYLGFGTPSNMGQGRRAAAAADLANSSGSETSAVELELQEKDRLLRGVEARD
LIDFGMIPEFVGRLPVVVPLHSLDEETLVQILTVPQNAVIPQYQALFSMDKCELNVTPGA
LRAIARLALERKTGARGLRSIMETLLLEPMFEVPQSDIMAVELNKEVVQGKALPGYIRTP
AKDSTEEEYDSGVEEENWPRMADAAKN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgcttgcacatctgcggcaagactgcttctcataaattctgcccaaaaagga
ctctctgggtctagggtccagctgctttctaaacgcagacctagcggacacgaggcccgg
ctgacacgcagaatcccggtccggtcgttctctgagacctcggtgtattttgcctcaaag
gacagcacgacaaagaatggtacaggagaaggaggaaaaaaatctctgagcgacggcagc
ggaaagcgctctggttcgggaaccactggcaaaggcggcagccagctccgctgtcccaag
tgtggggacctctgcactcatgtggaaacgtttgtctcctccacacgctttgtgaagtgt
gagaagtgccatcatttctttgtggtgttgtctgagacggactctaagaaaagcctgaag
gaacaggagaccgctgcagaggcagtgaaattcgccttccagcagaaaccgcccccaccc
cctaagaagatctatgcctatctggataagtatgttgttggccagtcccatgctaagaag
gtgttgtctgtggcggtctacaatcactacaaaagaatctacaacaacatccctccaacc
actcgaaagcctaccgaaacggagaaacatacctccattacgccccgggagatagagata
agaagacgagaagatgaataccgtttcacaaagctgttacagatcgctggcatcagtccc
cacggcaacgcgctgggggcctccgtgcagcagcagggggcgcaagcgagcgctcaggag
cagcggggcggggacgtgcttgacaccacccccactgaaatcaaactggagaagagcaac
atcatacttctaggccccacaggctcaggtaagaccctgctggcccagacgctggcgagg
tgtctggatgtgccctttgccatctgcgactgcaccactctcacacaggccggctacgtc
ggcgaggacatcgagtccgtcatcgccaaactcctgcaggatgccaactacttggtggag
aaggcccagcaaggcatcgtgttcctggacgaggtggataagataggcagcgtgccagga
atccaccagctgagagacgtgggtggagagggggtccagcagggcttgctgaaactgcta
gagggaaccgtggtgaacgtgccagagaagaactccaggaagctgaggggggagactgtc
caggtggacacgaccaacatcctgtttgtggcgtctggggcctttaacggcctggatcgc
atcatcagcaggagaaagaatgagaagtacctgggcttcggcacgccctccaacatgggc
cagggtcgccgggcggcagccgctgctgatctggccaatagcagtggttctgagacgagc
gcggtggagcttgagctgcaggagaaggaccgcctcctccgtggcgtggaggcgcgtgac
ctcatcgactttggcatgatcccggagtttgtgggcaggctgcccgtggtggtgcccctg
cacagtctggacgaggagacactcgtgcagatcctcaccgtaccccaaaatgcggtgata
ccccagtaccaggccctcttcagcatggataagtgtgagctgaatgtgactcctggtgct
ctgagggctatcgccagactggctctggagaggaagactggagctcgagggctcagatcc
ataatggagacgctgctgctggagcccatgtttgaagtgcctcagtcggacatcatggca
gtggagctgaataaagaggtcgtccaggggaaagccttgcccggttatatcaggactccg
gcaaaagactccacagaagaggagtatgattcgggcgtagaggaggagaactggcccaga
atggctgatgcagcaaagaactaa
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