Clupea harengus (Atlantic herring): 105893117
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Entry
105893117 CDS
T09045
Symbol
pgap6
Name
(RefSeq) post-GPI attachment to proteins factor 6 isoform X2
KO
K24576
transmembrane protein 8A/B
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
105893117 (pgap6)
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Gene cluster
GFIT
Motif
Pfam:
DUF3522
GMPPB_C
Motif
Other DBs
NCBI-GeneID:
105893117
NCBI-ProteinID:
XP_031419532
Ensembl:
ENSCHAG00000003295
UniProt:
A0A6P8F8Q1
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Position
26:complement(691449..706849)
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AA seq
752 aa
AA seq
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MDARITQCLPCLALFLLLAGCFAEDVTYASAFYSKGPLKLSKFSSFSSARLHHFRVPEDT
VLVRWLLTVTRGSGLNCGTQNVTVHFRAGAPPVIDPVGTAFPNQTAVTLAWNLTLSVGAR
QQQNQTLVNVSSPACGDWFVAAHLPEDDGKIQQKGLPSCFYLFQPQMLIRRAVDTPTLLP
NIPLSQTLSSAHTPSILKFFVPEFSTQLAVTIVTCAVEGVARPTCGLGLLIGSASSGRDS
RLTYNCSGEGPCTASVSAPPWGTWVQVAVETSLANVTMTFNISANSTVACKPKSAPADFN
SNFTVSVSNGTTAPNVSTETSAVARGDSSAGSCILTPAVSREDTDVLSLRFTVADGNLTV
PSDPPTLVTFDLNSAATSGGTLNVQISLNRSSVIGGFTSVRACLTPSVPVMALNNSQSCA
TAFVQGYSLSVDSSVTETALRIPFPEASMWYLTLQTLCNNSSECSNVSAVVGVSVNVSAC
IDDCGAYGDCRLLRTHSYLYASCACKAGWRGWGCTDGSKALSFSLQLRSVLFLTLSNLLF
LPPIILALYRGYLPEAAVYLYNMFFSTFYHACDQPGVTVLCILDYDTLQFCDFLGSCTSV
WVTVICMAKLQDLFKYVLFMSGALLIAMAMSLDRHGLWNFLGPLLFALITMVSAWVYRGV
GRRQCYPPLWRRWVFYLLPGIALALIGVCVYVFAETDGNYLYTHSLWHVLIATSILFLLP
PRDTHTQPWGWTHSLCGYKICKNQKEDLYTVS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacgccagaatcacgcagtgcctcccgtgcctcgctttatttctcctgcttgcggga
tgttttgcagaagatgtgacctacgccagcgccttctactccaaggggcccctaaaactc
tccaagttcagctctttctccagcgcccgcctccaccacttccgcgtgccggaggacacg
gtgctcgtgcgctggctgctcacggtgaccaggggctcggggctcaactgcgggactcaa
aacgtcactgtccacttcagggcgggcgctccgccggtgattgacccggtcggcacggcg
tttcccaaccagacggcggtgacgctggcgtggaacctcactctgagcgtgggcgctagg
caacagcagaaccagactctggtcaacgtcagcagccccgcgtgtggagactggtttgta
gctgcccacctaccagaggatgatgggaagatacagcagaagggtctgccgtcctgcttc
tacctctttcagccccagatgttgattaggcgggccgtggacacgcccactttgctgccc
aacattccactgtctcagaccctctccagtgcacacacacccagcatcctcaagttcttt
gttcctgaattctcgactcagttggcggtaaccatagtgacgtgtgcagtagaaggtgtg
gccaggcccacctgtggactgggtcttctgattggctcggcgtcttcagggcgggactcc
agactgacctataactgctcgggggaggggccatgcacagcttctgtgtccgcccccccc
tggggcacctgggtacaggttgccgtggagaccagccttgccaacgtcacgatgaccttc
aacatctctgcaaactccacagttgcttgtaaacccaagagtgctccagctgatttcaac
agcaacttcaccgtatccgtgagcaacggcaccacggctcccaacgtctccacggagacg
agcgcggttgcccgcggcgacagctcggcgggctcgtgcatcctgaccccggcggtgtcc
cgtgaggacacagacgtcctgtcgctgcgcttcactgttgccgacggcaacctgaccgtg
ccctctgaccccccgaccctcgtgaccttcgacctcaactcagcggcgaccagcggaggg
acgctaaatgtccagatcagcctcaataggagctctgtgattggtggcttcactagcgtg
agggcgtgtctgaccccctctgtccccgtgatggccctgaacaacagccaatcatgtgca
acagcatttgtgcagggttactctttgagtgttgacagcagtgtgaccgagaccgccctc
aggattccttttccagaagcctccatgtggtacctcactctacagactctctgtaataac
agtagtgagtgcagtaatgttagtgcagtggtgggtgtgtctgtgaatgtgagtgcctgt
atagatgactgcggggcgtatggcgactgcagactactgagaacacacagctacctttac
gcctcctgcgcctgcaaagcaggttggcgtggttgggggtgtactgatgggtcaaaggct
ctgtccttctcccttcagctgcgttcggttctcttcctgacgctcagcaacctcctcttc
ctcccgcccatcatcctggccctctaccgcggatacctccccgaggccgccgtctacctc
tacaacatgttcttctccacgttctaccatgcatgtgatcagcctggggtgactgtcctg
tgtatactggactacgacacgctgcagttctgtgacttcctgggttcctgtacctccgtc
tgggtcacagtcatctgcatggcaaagttgcaggacctcttcaaatacgtgctcttcatg
tcgggcgctctcctgatcgccatggcgatgtcgttggaccggcatggcctctggaacttt
ctcggaccactgctgtttgcactcatcaccatggtatcggcctgggtgtaccggggtgtg
gggcgtcgtcagtgctaccctcctctgtggcgtcgctgggtgttctacctcctgccgggg
atcgcgctggcgctcatcggcgtgtgtgtgtacgtcttcgccgagaccgacggcaactac
ctgtacacacactcgctgtggcacgttctcatagcaaccagcatcctcttcctcctgccc
ccacgcgacacacacacacagccctgggggtggacacactcgctctgcggctacaagatc
tgcaagaaccaaaaagaggacctttacactgtctcctaa
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