Clupea harengus (Atlantic herring): 105893194
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Entry
105893194 CDS
T09045
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X2
KO
K19951
TBC1 domain family member 8/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105893194 (tbc1d8b)
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105893194 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
105893194 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_7
OmpH
Motif
Other DBs
NCBI-GeneID:
105893194
NCBI-ProteinID:
XP_012675016
Ensembl:
ENSCHAG00000002958
UniProt:
A0A6P3VLE0
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All DBs
Position
8:934697..949016
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AA seq
1138 aa
AA seq
DB search
MWLKPEEVLLKNALKLWATVKSNDYFILQRRRGYGEGSGGLAGLLVGTLDAVLDSTAKVA
PFRILHQTPDSQVYWTIACGASEEELSQHWEWLQQNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSLVQEDEPEKFREALLRFESWFSLPGKEKLVTYFSCSCWRGRVPCQGWLYLS
TNFLCFYSYLLGNEVKLVISWVEISRLEKTTSVLLTESIRVCAGGEDHCFSMFLHLQQTF
LLMEQLADYAVRRLIDKETFPSDHILTDPLQITKRGLETHARNEAFRSFFRLPCEENLLE
VYESFLWVPFSHFNTLGKICVSESYLCFASQDGSQCHLIIPMREILSVEKPDRSSRALIV
CMRGKRALRFSEVRDFERLAGTIRRKCGNTASPQHSASSQMLLECHEDEEGLMVGQRDNS
KTVSTEALMNVFHPQDAENLDPKMLKEKMKEQSWQIHFAEYGRGTSMFCTRKTRDLIVRG
VPESLRGELWLLFSGAVNDMATHPGHYSELVEVSLGTISLATDEIERDLHRSLPDHPAFQ
SDTGISALRRVLTAYAYRNPKIGYCQAMNILASVLLLYAKEEEAFWLLVAVCERMLPDYF
NRRIIGALVDQAVFEDLIREHLTQLTEHMTDLTFLSSVSLSWFLTLFISVLPIESAVNVV
DCFFFDGIKAILQLGLATLDYNMDALLCCNDDTEAVTILNRFFDSVTNKDSPLPATVQQA
PVGHNDKAAQRVDISDLIREAYEKYGDIKSEEVESMRRRNKLYVIQTLEDTTKQNVVRVV
AQEVKFTASHMDELYVLFKRQHFLSCYWTVSSPALQHHDPSLPYLEQYQLGRAQFTSLFL
LLQPWSPGAYTHTLAHWTFRLIDDNHDGMVNFREFCRALDILYSGSFTDKLKFLFKLHLP
PVCSPDGSDDGVIRKSPEKGRGKVDLQAYLKQWQDEIQKKEESIKDLPRIDQTQFILLSK
TLYGLFHGDPEEEALFRAVARVTSLLLRMEEVGRRLQEDSAPSRASSSPQSPSPSKTSAS
PPESTSPVEAAAQQLEAVHVDQDPSSPGQAASDGAPSSPEGTSDGASSSTLETEPANTPS
EHTAPPSPQGLDWSFSFEQVLASLLNEPVLVRFFEKPVDIRNLLVRAKRDQLKAQINK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagaagtgcttctgaaaaatgcgctgaagttatgggcaaccgtg
aaatccaatgattatttcatactgcagagacgtcggggatacggtgaaggcagcggtggt
ttggcagggctcctcgtgggaactctggatgccgtactcgactcgactgccaaggttgca
ccattccgcatccttcaccagaccccggactcacaggtctactggaccatagcatgtggt
gcgtctgaggaggagctctctcagcactgggaatggctgcagcagaacatcatgagaacc
ctctccgtgttcgactccagtgatgatatcaccagcttcgtccagggcaagatcagaggt
ctgattgccgaggaggggaaggtgagtctggtgcaggaggacgaaccagagaagttccgc
gaggcgctgctccggtttgagtcctggttctccctgcccggcaaagagaaactggtcacc
tacttctcctgcagctgctggagaggccgggtgccctgccagggctggctctacctcagc
accaacttcctctgcttctactcctacctgctgggcaatgaagtgaagctggtgatctcc
tgggtggagatcagccggctagagaagacgaccagcgtgctgctgacggagagcatccgc
gtgtgcgcggggggagaggaccactgcttctccatgttcctccacctgcagcagaccttc
ctcctgatggagcagctcgcagactatgcggtcagacggctcatcgataaggagacgttc
ccgagcgaccatatccttacagacccactacaaattaccaaaaggggactggagacgcac
gccaggaacgaggcgtttcggtctttcttccgcctcccgtgcgaagagaatctcctcgag
gtgtacgagagcttcctgtgggtccccttcagtcatttcaacacactgggcaagatatgt
gtgtctgagagctacctctgctttgccagccaggacggcagccagtgccaccttatcatt
ccaatgagagagattctgagtgtggagaagcctgaccgcagcagcagggccctcattgtg
tgtatgagagggaagcgagcgctgcgtttctccgaggtccgtgactttgagcggctggcc
ggcacaatccgcaggaagtgtgggaacacggctagtccccagcactccgcctccagccag
atgctgctggagtgtcatgaggatgaagaaggactgatggtcggccagagggacaacagt
aagacagtcagcacagaggccctaatgaatgtctttcatccccaggacgctgaaaacctc
gaccccaaaatgctgaaagagaagatgaaggagcagtcttggcagatccacttcgcggag
tacggacgcggaaccagtatgttttgcacgaggaaaaccagagaccttatcgtgcgggga
gtgccagagtcactgagaggggaactgtggctgctgttctcaggtgcagtaaatgacatg
gcgacacacccaggccactactctgagctggtggaggtgtctctgggcaccatttctctg
gccactgatgagattgagcgtgacctgcaccgctctctgcctgaccacccggcattccag
agcgacacgggaatatcagccctgcgtagggttctcactgcatatgcctaccgaaacccc
aagataggctactgtcaggctatgaatatcctagcatctgtgttactgttgtatgccaag
gaggaagaagccttctggttgttggttgcagtatgtgaacggatgcttccagactatttc
aaccgcaggattatcggtgcactggtagaccaggccgtctttgaggacctgatccgggaa
cacctgacccagctgacggagcacatgaccgacctgactttcctgtcgtcggtatcgttg
tcatggtttctgacgctcttcatcagtgtgcttcccatcgagagcgcggtcaacgtggtc
gactgcttcttcttcgacggcatcaaagccattctgcagctgggcctggccactctagac
tacaacatggacgctctgctctgctgtaatgacgacacagaggccgtcaccatcctcaac
aggtttttcgacagcgtgactaataaagacagtcccctgcctgccactgtccaacaggca
ccagtgggccacaatgataaagcagctcagagagtagacatcagcgacctcatcagggaa
gcatacgagaaatatggagatatcaaatctgaggaagtagaaagcatgaggaggaggaac
aaactgtacgtgatccaaactctggaggacacgaccaaacagaatgtggtcagggtggtg
gcccaggaggtcaagttcacagcctctcacatggatgagctgtatgtgctgttcaagagg
cagcacttcctgagctgctactggaccgtgagcagccctgctctgcagcaccacgacccc
agcctgccttatctggagcagtaccagctgggccgggcccagttcaccagcctcttcctg
ctgctgcagccctggagccccggcgcctacacgcacacgctcgcccactggaccttccgc
ctgatcgacgacaaccacgacggcatggtcaacttcagagagttctgccgagccctggat
atcctctacagcggttcattcacagataagctgaaattcctcttcaaactgcacctgccg
ccagtgtgctctccagatggttctgacgatggggtgataaggaaaagcccagagaagggc
cgtggaaaggtggacctgcaggcctatttgaagcagtggcaagacgagatccagaagaaa
gaggagagtatcaaagacttgcctcgaattgatcagacccagttcatcctgctgtccaag
accctgtacggcctgttccacggcgacccggaggaggaggcgctgttccgcgccgtggcc
agagtcaccagcctcctgctccgcatggaggaggtgggacgcagactgcaggaggactcc
gctccctcccgggcctcctcaagcccacagtcccccagccccagcaagacctccgctagt
ccgcctgaaagcaccagccccgtggaggccgctgcccagcagcttgaggccgtccacgtg
gaccaggacccttccagtcccggccaggccgcctccgacggggccccctcgtcccccgag
ggcacctcggacggggcctcctccagcaccttggaaacagagcctgccaacacgccctct
gagcacacggcaccccccagccctcagggcctggactggtccttctccttcgagcaggtt
ctggcctctctcctcaacgagccggttctggtgaggttcttcgagaaacctgtagacatc
cggaacctcctggtccgggccaagagagaccaactgaaagcacagatcaacaagtga
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