Clupea harengus (Atlantic herring): 105893323
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Entry
105893323 CDS
T09045
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105893323 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105893323 (nipblb)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105893323 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
105893323
NCBI-ProteinID:
XP_012675167
Ensembl:
ENSCHAG00000017290
UniProt:
A0A6P8EU26
LinkDB
All DBs
Position
21:3543907..3586590
Genome browser
AA seq
2691 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVGCLLACRDET
LVSQLAHSLTQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKSIMQQQQMVS
QYKMSQNSMHGSPASTNYQQTTISHSPSSRFVPPQTGTGSRFLPQQGSPVPSPYAPTSPA
GYMQYSHPPSYSQHQQIQQGTLSVASPMVPGGMRNIHDSKVSGQMASNSANHNSSEDYMG
MVHRPMGSGESDPSMRNTSYPVRSPVCSPAGSEGTPKAGSRPPLILQSPPPYTSPRDAAA
AAEMLLDSPEHRKKLKKLVKDEVAGDPKNAPAMYDIVSPPSKDSTKLTLKLSRVKSGESE
PPSGNAELLPGAEHGSDTEGDLPFNSLQPFRGGPQDPAQRLGPVHCLSGGEQSGYQQVPV
LQNTGAVPGRMMTGGSGTPYDEAEMDALAEIERIERESAIERERCSKEVQDKDKPLKKRK
QDSYPQEPGAGGTAGATGGPGMAGGGSAGHKLAPQEASAASNGANRLALMVSIDLQQAGR
GEGQLEPVATPVPALEAQRWPEEGAEPAGVLRMRSKTDGEVQKADGRPEVIKQRADTPQK
PGPDGHAEMPRHKQDGRHERERDRESAKVSSERRPDGSKHRHDGKPDGKNRSDTPRKTDS
ARDGHREDRHRDRDRDKERDKEKERDGDSSRVRRPETPKSSDRHERRDREREKDRRSRPD
GEGRDRQTPEQRREKGDSPRVKPERDGSRPRPDRPGAKDGERRSGGGDSGRNRPDTHKQP
VPDTKPTGEFPPFLLGGKSGALKNFVIPKLKRDKEGKVIADLQKAEGWSEPRIKLERIGP
DKDKEKEKEKDKAPGPGPSPGPGPGPGPSPGLEKDLKKGAKPVVVLQKLSLDEVQKIIRK
SKSRPPLGKSSKASYDQSVLRELPPQLMAEIESTMPLCERVKMNKRRRSTVNDKPKYAEA
SSEEETEAFTEPSRKRSKRERDKAWETEEKSEPLREQRERRGSGEHRRSRQKDRTPEESE
EESPPPSISDVARKLKKKEKQKKRKAYEPKLTSEEMMDSSTFKKFSANVDNILENLEDVD
FTALDDDEIPQELILGKHQLSELGSESAKIKAMGVTFRLPTDKLVKVLNILEKNIQDGSK
LSTLMNHDNDEDEERLWRDLIMERVTKSADACLTALNIMTSTRMPKAVYIEDVIERVLQY
TKFHLQNTLYPQYDPVYRVDPHGSGLMSSKAKRAKCSNHKQRVIVLLYHKVCDIVSKIAE
LLEIQLLTDTTILQVSSMGITPFFVENVSELQLFAIKLVTAVFSRYEKHRQLILEEILTS
LARLPTSKRSLRNFRLNSSDVDGEPMFIQMVTALVLQLIQCVVHLPSQKDHDDEYDKKMD
QDLLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAE
LLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSSMDQKSIDRILREAS
GSDETQQLQKALLDYLDENSENDPSLVFARKFYIAQWFRDTTTECEKAMKNQKEDDSDSQ
HHARELETTGEIMQRAELRKKFLRAIVKSLPAQFTQLKMNSDTVDYQDACLIVRYLASMR
PFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAADPSILARSDMQRGVHCRLMDNS
TSVREAAVELLGRFVLCRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSK
ITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNNDKEAMTRKILNITDVVSACKDTG
YDWFEQLLQNLLKVEEDASYKPARKACVQLVDNLVEHILKYEESLADNENKAVNSNRLVS
CITTLYLFSKIRAQLMVKHAMTMQPYLTSKCNTQNDFVVICNVAKILELVVPLMEHPSET
FLATIEEDLMKLIIKYGMLVVQSSVSCLGAVVNRVTHNYKFVLTCFNRYYGASNKLKLQH
QEDPTSSVVTSNKPALLRSLFTVGALCRHFDFDLEDFKGTSKVVIKDKVLELLLYFTRIE
DEEEVQTKAIMGLGFLFIMHPDLMFIPDVKNLYNDILSDSKRSDNLKIQVLKNLQTYLQE
EDSRMQEADREWKKLSKKEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALN
VIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKSDQQLVEIDKKYTGFIHMKAVAGLKM
SFQLQLSIQAKPGSIVRGFRQDETHSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKT
EVNQLLFVADNLACFPFQSQDEPLFIMHHIDITLSVSGSNLLQSFKESLQKEPRHRDKKE
KRRERERERERERERERKYGSEEEDEGRHSSRNNSDEEDEEVKRRPKKSKRPAVNSESDS
ESDADDVEKVMDRLPDNTIPLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTES
AKVYDKAVNRKNNIHFSPRQTLEFLGNNLFKADITYDLKKRIVRQYLDFKVLMEHLDPDE
EDEEGGEASANIRNKAINNLLGGASPKNHPPPPADSEDEESEGDEKTPGSSRRSRSRGGD
SAEAMGHMNETVEATDVIAICCPKYKDRPQIARVIQKTSTGYSVHWMAGSYSGVWAEAKK
RDGRKLVPWVDTIKESDIIYKKIALTSAHKLTNKVVQTLRSLYSAKEGSSS
NT seq
8076 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgtgcccatcaccactctcgctgggatcgctagcctcaca
gacttgttgaaccagctgcctctcccctccccgctgcctgccaccaccaccaagagcctg
ttgtacaatgggaggattgctgaggaggtgggttgcctgctggcctgccgtgacgagacg
ctggtctcccagctggcccacagccttacacaggtctccaccgagcacatagagctgaag
gacaaccttggcagtgatgacccggagggagacgtgcctgtgctgctgcagacggtgttg
tccaggaaccccaacatcttcagggagaaaagtatcatgcagcaacagcaaatggtctca
cagtataagatgtcccaaaattccatgcacggaagcccggcatcaacaaactaccagcaa
accactatttcacacagtccttccagtcgcttcgttcccccacagacgggcacggggagc
aggttcctgccccaacaggggagcccagtgcccagcccctatgcccccacgagtcccgca
gggtacatgcagtactcgcatccccccagctactcccaacaccaacagatccagcaaggt
actttgtcagtggccagtcccatggtgcctgggggcatgaggaacatacatgacagtaaa
gtctcgggtcagatggccagcaactcagccaatcacaactcaagtgaagattacatgggc
atggtgcatcgacccatgggcagcggggaaagcgacccctccatgagaaacacctcgtac
cctgtcagatcgcctgtctgctctcctgccgggagtgaaggcaccccaaaagctgggtca
cggccgccactcatcctccagtcgccgcccccttacacgtccccccgcgatgcagccgcc
gccgccgagatgctgctggactcgcccgagcaccgcaagaagctgaagaagctggtgaaa
gacgaggtggcgggcgatcccaagaacgcccccgccatgtacgacatcgtcagcccgccc
tccaaagactcgaccaagctcacgctcaagctgtcgcgggtcaagtccggcgagtcggaa
cctccgtctggcaacgccgaactcctcccgggggcggagcacggctcggacactgagggc
gatctgccctttaacagcctgcaaccgttccgtggcggcccccaggaccccgcgcagaga
ctgggcccggtgcactgcctgagtggcggggagcagtcggggtaccagcaggtgccggtg
cttcagaacacgggcgcggtgccgggccggatgatgacggggggcagcgggacgccgtac
gacgaggcggagatggacgcgctggccgagatcgagaggatcgagcgggagtcggccatc
gagcgggaacgctgctccaaagaggtccaggacaaagataagccactgaagaagcggaag
caggactcctaccctcaggagcctggggccgggggaactgcaggggccactgggggcccg
gggatggccgggggcggcagtgcagggcacaaactggcaccccaggaggccagcgccgcc
agcaacggggcaaatcgcctggccctaatggttagcatcgacctgcagcaggccggccgg
ggggaggggcagctggagcctgtggccacgcctgttcctgctctggaggcgcagcggtgg
cccgaggagggggcggagcctgcgggggtcctgcgcatgcgttcaaagacagacggcgag
gtgcagaaggcggacgggcggccggaggtgataaagcagcgcgcagacacaccgcagaaa
cctggtcccgacggtcatgccgagatgcccaggcacaagcaggacggacggcacgagcgg
gaaagagaccgagagtcggccaaggtcagctctgagcggagacccgacgggtcgaagcac
aggcacgacggcaagcctgacggcaagaaccgctctgacaccccacggaaaacggactcg
gcacgtgacggacatcgagaggaccgacaccgagaccgggatcgagacaaagaacgagac
aaagagaaagagcgtgatggtgactcctctcgtgtccgccggcccgagaccccaaagtcc
tcagaccgacacgaacggcgggaccgggagcgcgagaaagacagacggtcaagaccggac
ggcgaaggacgagaccggcaaaccccagagcagcggcgagaaaagggcgacagcccccgg
gtcaaaccggaacgagacggcagccgccctcgccccgaccggcctggtgcgaaagacggc
gagcgacgcagcggaggcggcgactcgggcagaaaccgcccggacacccacaagcagccc
gtccctgacaccaaacccaccggcgaattcccaccattcctgctgggcgggaagtctgga
gcactgaagaactttgtgattcccaagctgaagcgggacaaggaagggaaagtgatcgcg
gaccttcagaaggctgagggctggagtgagccccgcataaagctggagcgcatcggccca
gacaaagacaaagagaaagagaaagagaaagacaaagccccaggcccaggtccaagccca
ggcccaggcccaggcccaggcccaagcccaggccttgaaaaggacctaaaaaagggggcg
aaacctgtggtggtgctgcagaaactctccctggacgaggtgcagaagatcatccgcaag
agcaagagcaggccacccttagggaaatcctcaaaagcgtcttacgatcagagtgtccta
cgggagctgccgcctcaactgatggccgagatcgaatccaccatgcctctgtgcgagcgg
gtcaagatgaacaagcgcaggcgcagcactgtcaatgataagcccaagtacgccgaggca
agctctgaagaggagaccgaggccttcaccgagccctcgaggaaacggagtaagcgggaa
cgggataaggcatgggagaccgaggaaaaaagtgagcccctgcgtgaacagcgcgagcga
cggggttccggcgagcatcggcgcagccggcagaaggaccgaactccagaggagtcagag
gaggagtcacccccgcccagcataagtgacgttgccagaaagttgaagaagaaggagaag
cagaagaagaggaaggcgtacgaaccgaagctcacttcagaagaaatgatggactcctcc
acgtttaagaagttctctgccaatgtggacaatattctggaaaacctggaagatgtggat
ttcacagcattagacgacgacgagatccctcaggagctcatccttggcaaacaccagctc
agtgagctgggcagcgagtcagccaagatcaaggccatgggcgtcactttcaggcttcca
actgacaagctcgtgaaggtcttgaacatcttggagaagaacattcaggatggatccaaa
ctctcaacattgatgaatcacgacaatgatgaggatgaagagcgtctctggcgtgacctc
atcatggagcgggtcaccaagtcagccgatgcgtgcttgacggcgctcaacatcatgaca
tcaacgcgcatgcccaaggccgtttacatcgaggacgtgatcgagcgagtgctgcagtac
acgaagttccacctgcaaaacacgctctacccccagtacgaccccgtgtaccgcgtggat
ccacatggaagtggtttaatgagctccaaagccaagcgtgctaaatgttccaatcacaag
cagagggtcatagtcctgctctaccacaaagtctgtgacatcgtcagcaagatcgctgag
ctcctggagatccagctgttgacggacaccaccattctgcaggtgtcctctatgggtatc
acgccattctttgtggagaatgtgagtgagctgcagctgtttgccatcaagctggtgact
gcggtgttctctcggtatgagaagcacaggcagctgatcctggaggagatcctcacgtcg
ctggccaggctgcccaccagcaagaggagcctgaggaacttcaggctgaacagcagcgac
gtggacggggagcccatgttcatccagatggtgactgctctggtgctgcagctcatccag
tgcgtggtgcacctgccctcacagaaagaccacgacgatgagtacgacaagaagatggat
caagatctcctgattacaaactcgtatgagacggcgatgaggactgcacagaactttctc
tctgtattcctcaaaaagtgtggcagtaagcaaggggaggaggactaccggccgcttttt
gagaacttcgtccaggatctcctctccacggtcaacaagccggagtggccagccgcagag
ctgctgctcagcctcctgggacgtctgctggtgcaccagttcagtaataagcagacggag
atggctctgcgcgtggcctcgctggactacctgggcacagtggccgctcgcctgcgcaag
gatgccgtcaccagctcgatggaccagaagtccatcgaccgaattctgcgggaggcctca
ggcagcgatgagactcagcagctccagaaggctctgctggactacctggacgagaactcg
gagaacgacccctcgttagtgttcgctcgtaagttctacatcgcgcagtggttccgtgac
accaccacagagtgcgagaaggccatgaagaaccagaaggaggacgactcggacagccag
caccacgcccgcgagctggagaccacgggcgagatcatgcagcgcgccgagctgcgcaag
aagttcctgcgcgccatcgtcaagagcctgcccgcgcagttcacccaactcaagatgaac
tcggacactgttgactatcaagacgcctgcctgatcgtcagatatttggcctccatgagg
ccgtttgcgcagagctttgatatttatttaacacagattctgagagtgttgggggagagt
gccatcgcagtgcggaccaaagccatgaagtgtctgtcggaggtggtggcagccgatccc
agcattcttgcaaggtcggacatgcagcgcggggtgcactgtcgtctcatggacaactcc
accagcgtgcgcgaggcggccgtggagctgctggggcgcttcgtgctgtgccggcctcag
ctcaccgagcagtactacgacatgctcatcgagaggatactggacacgggcataagtgtg
aggaaaagggtaattaagatcctgagagacatttgcctagagcagcccaccttcagcaag
atcacggagatgtgtgtgaagatgatccgcagggtaaacgacgaagagggcattaagaaa
cttgtgaacgaaacattccagaagctctggttcacgccgacgccgaataacgacaaagag
gccatgaccaggaagatcctcaacatcactgatgtggtatcagcgtgcaaagatacgggt
tatgactggttcgagcagctgcttcaaaatttgctgaaggtagaggaggacgcctcctac
aagccggcgcgaaaagcgtgtgttcagctggtggacaatctggtggagcacatcctcaag
tatgaggagtctctcgcagacaatgagaataaggcggtgaactcgaaccgtctggtgtcc
tgcatcaccacgctctacctgttcagcaagatccgagcgcagctgatggtcaagcacgcc
atgaccatgcagccgtacctgacctccaagtgcaatactcagaatgactttgtggtgatc
tgcaatgtggccaagatcctggagctggtggtgcctctgatggagcacccaagcgagacc
ttcctggccaccattgaggaggacctgatgaagctcatcatcaaatatggcatgctggtg
gtgcaaagttcagttagctgtcttggtgctgttgtgaacagggtcactcacaactacaag
tttgtcctgacctgcttcaaccgatattacggtgcatcgaacaagctgaagctccagcac
caggaggaccccaccagctcggtggtgaccagcaacaagcctgctctgctgcgctcgctc
tttaccgtgggggccctctgccggcactttgactttgaccttgaggacttcaaaggcacg
agcaaggtggtgatcaaggacaaggtgctggagctactgctgtacttcaccaggattgag
gatgaggaggaggttcagaccaaagccattatgggcttgggtttcctgttcatcatgcac
cccgacctcatgttcattccggacgtgaagaacctctacaatgacatcctgtcggacagc
aagaggtcggacaacctgaagatccaggtgctgaagaatctgcagacgtacctgcaggag
gaggactcgcgcatgcaggaggccgacagggaatggaagaagctgtccaagaaggaagac
ctgaaggagatgggggacatctcgtcaggcatgagcagctccatcatgcagctctacctg
aagcaggtgctggaggccttcttccacacgcagtccaacgtgcgccacttcgccctcaac
gtcatcgccctcactctcaaccagggcctcatccaccccgtgcagtgtgtgccctacttg
atcgccatgggaacggaccctgagcccagcatgcggaacaagtcggaccagcagctggtg
gagatcgacaagaaatatacaggattcatccatatgaaagctgtggcgggcttgaagatg
tccttccagctgcagctgtccatccaagccaagccaggctccatcgtgcggggcttccgc
caggatgagacgcattcagccctctgcgcacacctcttcagcatggtgcggagcaaccgg
cagcaccgccgagccttcctcatctccctgctcaacctcttcgatgacagctcgaaaacg
gaagtgaaccagctgctcttcgtcgcagacaacttggcatgcttcccctttcagagccag
gacgagcctctcttcatcatgcaccacatagacatcacactgtctgtgtcaggcagcaac
ctgctacagagctttaaagagtctttacagaaggagcccaggcatcgagataagaaagag
aagaggagagagagggagcgggagagagagcgggagcgagagagggagcggaagtatggc
tcagaggaagaggatgaggggcggcacagtagtcggaacaactcggacgaggaggatgaa
gaagtgaagaggaggccgaagaagagcaagcggcccgcggtgaactctgagtcagactcc
gaatcggacgcggacgacgtggagaaggtgatggatcgtctccctgacaacacgatcccg
ctgctggactttgcaaacgcgtctcagggcatcctgctcctgctggtgctgaagcagcac
ctgaagaacctttacggcttctccgatagcaaaatacaaaagtattctcctacggaatcc
gccaaggtgtacgataaagccgtgaacaggaagaacaacatacacttcagtccccggcag
accctggaattcctcggcaacaacctgtttaaggcggacatcacctacgacctcaagaag
aggatcgtcaggcagtatttggatttcaaggttctgatggagcatttggacccagacgaa
gaggatgaggaaggaggagaggcctcagccaacatccgaaataaggccatcaataatctg
ctgggtggagccagccccaagaaccaccctcccccacccgcagactctgaagacgaggag
agcgaaggggacgagaagacaccagggtcatcacggcgctcgcggagtcgagggggcgac
tcggcggaggcgatgggccacatgaacgagacggtggaggccacggacgtcatcgccatc
tgctgccccaagtacaaggaccggccgcagatcgcgcgggtcatccagaagaccagcacg
ggctacagcgtccactggatggccggctcgtactcgggcgtgtgggccgaggccaagaag
cgggacggccgcaagctggtgccgtgggtggacaccatcaaagagtcggacatcatctac
aagaagatcgccttgacgagcgcgcacaagcttactaacaaagtggtgcagactttacgg
tcactgtactcggccaaggagggcagctccagctaa
DBGET
integrated database retrieval system
