Clupea harengus (Atlantic herring): 105893486
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Entry
105893486 CDS
T09045
Symbol
papolg
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105893486 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105893486 (papolg)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105893486 (papolg)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
105893486 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
105893486
NCBI-ProteinID:
XP_031434511
Ensembl:
ENSCHAG00000003904
UniProt:
A0A6P8GCF8
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All DBs
Position
13:complement(23077785..23091305)
Genome browser
AA seq
808 aa
AA seq
DB search
MKEMSATSISTLSGQQQPQKHYGITSSISMAFPREIDHIYTQKLMEAMKPFGVFEDEDEL
NHRLAVLGKLNSLVKEWISEISDLKNIPPIAVANVGGKIFTFGSYRLGVHTKGADIDALC
VAPRHVERTDFFLSFFEKLKLLEEIKDLRAVEDAFVPVIKFNFDGIEIDLLFARLALPSI
PDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYS
NMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLP
VWDPRVNPSDRYHLMPIITPAYPHQNSTYNVSTSTRTIMSEEFRNGLTVTDEILLGKAEW
SKLFEPPSFFQKYKHYIVLTASASTEDNHLEWIGLVESKIRVLVGNLERNEYIVLAHVNP
QSFPGSKESRIESDYVSMWFIGISFKKMESSESVNIDLTYDIQSFTDTVYRQANNINMLK
DGMKIEATHVKRKQLHQYLPPDVLQRKKKSVGDPNRSSTGGDSKRCSMDGSQLDSSRDTD
TGTPFSSPTPVCLPCKPVSDTESSITPPKPPVPLFVESPPSSEVEQGMSIPVIGSKPPSP
PAAKPSSPTPAGSTIPTVVGCSVIIPRACNSPTDLADGAGAGAAPSKRPHSPTLEEPTKK
SKADMGFAEPPAGSTIPTVVGCSVIIPCLSSPTGSPSDLPNGLNGSASKRPHSPSLEESI
KRSKEMEEPVFSDDSAFKEPXPPSSNGQEKGDGPDVDGCSGTKPMPIPTIDTSRSQRLPS
NELPDASSPVPTSNLRVIKNSIRLTLNR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagcgaccagtatcagtacgcttagtggacagcagcagcctcagaaa
cactatggcatcacctcctccatcagcatggcatttcccagggaaattgaccacatatac
acccaaaagctcatggaggcgatgaagccctttggggtgtttgaggatgaagatgagttg
aaccacaggttggcagttcttggaaaactaaattcactcgtgaaagagtggatttctgag
atcagtgacctaaagaacatcccacctatagccgtcgccaatgttggaggcaaaatcttc
accttcggctcatacaggctgggcgttcacaccaaaggggctgatattgacgcgttgtgt
gtggcgcctcggcacgtggaacggacagattttttcctgtccttcttcgagaagctcaaa
ctgttagaggagattaaagatttacgggctgtagaagatgcctttgtgccggttatcaaa
ttcaacttcgatggcattgagatcgatcttctgtttgcgaggcttgctcttccatccatc
cctgacaacctagacctgagaggggactcgctactaaggaatcttgacatcagatgcatt
cggagtctgaacggttgccgtgtcactgatgagatactgtatctggtgccgaacaaggag
aacttcaggctgacacttagagccatcaaattatgggccaagcgtcgtggcatctactcc
aacatgctgggcttcctcggaggcgtgtcgtgggcgatgctggtggccaggacctgccag
ctctatcctaatgctgtagccgccacgctggttcacaagttcttcctggtcttctccaag
tgggaatggcctaatccggtgcttttaaaacagcctgaagacagcaacttgaatctacct
gtgtgggatcctcgagtaaacccatcagacaggtaccacctgatgcccatcatcactcct
gcatacccacaccagaactccacctacaacgtctccacctccacgcgcaccatcatgagt
gaggagttcagaaatggtttgactgtgaccgatgaaatccttctgggtaaagcagagtgg
tcgaagctctttgagcctcccagcttcttccagaagtacaagcattacatagtgcttaca
gccagtgcatcaactgaagacaaccatcttgaatggattggacttgtggagtccaaaatc
cgcgtcctcgtgggaaatctggagcggaacgagtacattgttctggcccacgtgaaccca
cagtccttcccgggatccaaggaaagccgcatcgagagtgattatgtctcgatgtggttc
atcggaatcagcttcaagaagatggaaagctcagagagtgttaacatcgacctgacatac
gacatccagtccttcacagacactgtctaccggcaggcaaacaacatcaacatgctgaaa
gatgggatgaagatcgaggcgacccacgtgaagaggaagcagctccaccagtacttacct
ccagacgtgctgcagcgcaagaagaagagtgtgggcgaccccaaccgcagctccaccggt
ggggactccaagcgctgctcgatggacggcagccagctggacagctccagagacaccgac
acagggaccccattcagctctcccaccccagtctgcttgccctgcaagcccgtctcagac
acagagagcagcattactccacccaaacctccagtccctctgtttgtggagagtcctccc
tcctcagaggtcgagcagggtatgtccattccagtcatcggctccaagcccccgagcccc
ccggcagccaagccctccagcccgaccccagctggcagcaccatcccgacggtggtggga
tgcagcgtcatcatcccacgtgcttgtaacagccctacagacctggccgacggggccggg
gccggggcagccccctccaagagaccccattcccccacactggaggagcccaccaagaag
agcaaagcagacatgggatttgcagagccccctgctggcagcaccatccccactgtggtg
ggatgcagcgtcatcatcccctgcctgagctcacccaccggcagccccagcgacctgccc
aacggactaaacggctccgccagcaagagacctcactccccctccctggaggagtccatc
aagaggagcaaagagatggaggagcctgtgttctctgacgactctgcctttaaggagccc
nttcccccatccagcaatggtcaggagaagggagatggacccgacgtggacggctgcagt
ggcacaaagcccatgcccatccccaccatcgacacgtcacgatcacagagactacccagt
aacgagctgccggacgcctcatccccagtccccactagcaacctgcgagtgatcaaaaac
tccatcagactcaccctcaaccgatag
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