Clupea harengus (Atlantic herring): 105893495
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Entry
105893495 CDS
T09045
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105893495 (otx1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105893495 (otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
105893495
NCBI-ProteinID:
XP_012675376
Ensembl:
ENSCHAG00000001784
UniProt:
A0A6P3VLV0
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Position
13
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AA seq
335 aa
AA seq
DB search
MMSYLKQPPYAMNGLGLSGAAMDLLHPSVGYPSTPRKQRRERTTFTRSQLDILEALFGKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNSAKARPPKKKSSPTRESTG
SESSGQFTPPAVSSAGSSSSSSSSTGGGGGTGAGTNTGINSTSTSISTVSSIWSPAISPG
SAPAPPATLPESVAPANASCMQRSVSSTAGSSYPMSYNQPAGYSQGYPAPSGSYFSGVDC
GSYLAPMHSHHHPHQLSPMTASSMSGHPHHHISQSSGHHHHHHHHHQPYSGAGLAFNSSD
CLDYKDQTASSWKLNFNATDCLDYKDQTSWRFQVL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccctacgccatgaacggcctggggctgagcggagcc
gcgatggacctgctccatccgtccgtgggctacccatcaactccaagaaaacaacgtcgg
gagcggactacatttacgcgttcgcagctggacattctggaggccctctttggcaagacg
cgctaccccgatattttcatgagagaagaggtggcgctgaaaataaaccttcctgagtct
agagtccaggtttggtttaagaaccggcgggccaagtgcaggcagcagcagcagagtggc
aacagcgccaaggcccggccgcccaagaagaaatcgtcccccacgcgcgagagcacgggc
tcggagagcagtgggcagttcacccctccggccgtgtccagcgccgggtcttcgtccagc
tctagctcgtccacgggcggtggcggcggcacgggcgcgggcaccaacacgggcatcaac
agcacctctacctccatcagcaccgtctcctccatctggagcccggccatctccccaggc
tccgccccggctcccccggccaccctgcccgagtccgtggcccccgccaacgcctcctgc
atgcagcgctccgtttccagcacagccggctcctcttaccccatgtcctacaaccagccg
gccggctacagccaaggctaccctgccccatccggctcctacttcagcggggtggactgc
ggctcttacctggcccctatgcactctcaccaccacccccaccaactcagccccatgacc
gcctcctccatgtctggacacccccaccaccacatcagccagtcctcagggcaccaccac
catcaccaccaccaccaccagccctacagtggcgcaggactggccttcaactcctccgac
tgcctggattacaaagaccaaacggcctcctcgtggaaactcaacttcaatgccacagac
tgtctggactacaaagaccagacttcctggagattccaagtcttgtga
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