Clupea harengus (Atlantic herring): 105893548
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Entry
105893548 CDS
T09045
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04137
Mitophagy - animal
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04261
Adrenergic signaling in cardiomyocytes
char04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105893548 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105893548 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105893548 (atf4a)
09143 Cell growth and death
04210 Apoptosis
105893548 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
105893548 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105893548 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105893548 (atf4a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
105893548 (atf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
ZapB
Nop53
Asd-4
UPF0242
Motif
Other DBs
NCBI-GeneID:
105893548
NCBI-ProteinID:
XP_012675431
Ensembl:
ENSCHAG00000025601
UniProt:
A0A6P3VM91
LinkDB
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Position
26:complement(8041326..8045204)
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AA seq
416 aa
AA seq
DB search
MSLSSQLVMEEVGSLFLGPSLLMDDPLGPLLDDEEEPLTEGRASPLSFSSYADSCSSPFP
CLSPPSPPSTLLGSKADLLPSLPWFSADELLTAHIGAENSQVDAFSGMDWMAEKIDLSDF
DLQSLIGSCESDEPPSSPEELLACLESHMDLDLDPLPFPDASAHEDLALLPLPEDPVPPI
SLPEPEVAIVPEPALLEIEIKSEPSSPVPSPLPSSCTLELGSEVDVSELEKVVPPVVATA
TPDALQTSSIVLSLSPTHIVVVLASPKEELSPIPSSCGELYDSGIGSDAGSPPHQASPPP
SPRPGGSSRTKPYSKPDPDAAGSPPISGKVKTVSGAPRVVEKKLKKMEQNKTAATRYRQK
KRSEQDLLNMEVAELEKRNHELGEKADSISREIKYLKDLLEEVRSAKNRKPKTSSA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagctcacaactagttatggaggaggtggggtccctgttcttgggaccctca
cttctgatggatgaccctcttgggccccttctggacgatgaagaggaacctctgacagag
gggcgtgcttcgcccctttctttctcttcctatgctgattcttgctcctctcccttcccc
tgtctctctcctccctcccctccctccactctcctgggatccaaggctgacctgcttcct
tccctgccttggttctcagccgatgagctgctgactgcccacataggtgcagagaacagc
caagtggatgctttctctggaatggactggatggcggagaagatcgatctcagcgacttt
gacctccaatctctcattgggtcctgcgagtcagacgagccgcccagttctccggaagag
ctcctggcctgccttgagtcccacatggatctcgacttggatccgctgcccttccccgac
gcttccgctcacgaagacctggctcttctcccacttcctgaagaccccgttcctcccatc
tcactcccagaaccagaagtagcaatcgttcccgagcctgctctcctggagatcgagatc
aagtcggagccatcctctccggtcccgtcccccctgccctcctcctgcacccttgagttg
ggtagtgaggttgatgtttctgagctggagaaggtggtgcctccggttgtggccacggca
accccagatgcccttcagacctccagtattgttctctccctctctccgacgcacatcgta
gtggtcctagccagccccaaagaggagctgagccccattccaagctcttgtggtgagctg
tacgacagcggcattggctctgacgccggctcgcctccccaccaggcgagccctcccccc
tctcctaggcccggcggttcctccagaaccaagccctactctaagcccgatccagatgca
gctggctcgccccccatcagtggcaaggtgaagactgtgtctggagcgcctagggtggtg
gagaagaagctgaagaagatggagcagaacaagaccgcagctacccgttaccggcagaag
aagcgctccgagcaggatctgctgaatatggaggtcgcagagctggagaagcggaaccac
gagctgggggagaaggccgactcaatcagccgtgagatcaagtatctgaaagatctcctg
gaggaggtacgctctgccaaaaaccgcaagcccaagaccagctcggcctag
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