Clupea harengus (Atlantic herring): 105893629
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Entry
105893629 CDS
T09045
Symbol
iqsec2b
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 2
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105893629 (iqsec2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105893629 (iqsec2b)
Membrane trafficking [BR:
char04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
105893629 (iqsec2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
PH
PH_13
Cyclase_polyket
Motif
Other DBs
NCBI-GeneID:
105893629
NCBI-ProteinID:
XP_042563633
UniProt:
A0A8M1KMM4
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All DBs
Position
4:complement(30154059..30229361)
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AA seq
1155 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLLESQRRRIEELETQLDRVNQENTGLRLDQHNS
CPEPTPVPIQNHTDQSPTQPSSLPLNPSSGTGTGAGPLHNSNNGTGSTATSPSSSTAPPA
GLNRERRNHTRLTRGLSCGAAPVERERTGRLERIDSSGTNTTPAPRRHVEVESRNTEHSG
TFADSPRGQDPYLHGSERFGDSSGSGPPGPRVPCVAPPSPASLTWAQHTRHQPASLALRK
QEEEENKKCRALSDSYELSTDLQDKKVEMLERKYGGYFLSRRAARTIQTAFRQYRMNKNF
ERLRSSASESRMTRRIILSNMRLQYSFDERPPSLPALSQTPAQTPYGQGMGTPELEPSPS
PTHSAGKYTHLEDSFSKQVKSLADSIDDALTCRAGRDDSQDGSGEVGGGSSAAEDYGECV
WSNSSHPSASPSPSSRRGLGERGGGGGGRGLSMHEDSTATSYSDVTLYMDDGMPSSPLSL
DRTPSSTDTEFWGIGGTGGGREDSRDTEGGGSSNSRRSTPCTECRDYRLRGPHLPVLTIE
PPSDSSVDMSDRSDRGSLGRQLVYDQEPPGGGSPQETLKHNAGPVRSVMSSTTSSSTAVV
AQGQTRPPRAPLPTQIPANMAHHHHHHHHHHHHHYPDTPSSSSSPQQPPTTPLSSSSSAP
LAPGSLEQPCCSDGDNDSLNSTTNSNDTINCSSGSSSRDSLLEPMPPLGKQTYQREGRNT
WDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARFILERKGLSRQ
MIGEFLGNRQKQFNKDVLDCVVDEMDFSGMDLDDALRKFQAQIRVQGEAQKVERLIEAFS
QRYCVCNPPLVRQFRNPDTIFILAFAIILLNTDMYSPNIKPERKMKMEDFIKNLRGVDNG
QDIPRDLLVGIYQRIQKWELRTNDDHVSQVHAVERVVVGKKPVLSLPHRRLVCCCQLYEV
PDPNRPQRTGVHQREVFLFNDLLVVTKIFQKKKTSVTYNFRQSFSLVEMQVHMFQNSYYP
HGVRLTSANPGGERKVLIVLMAPSQQDRSRFISDLRESIAEVQEMEKYRVETELEKQKGV
MRTGMLAGSMGGGLKNDVVNGTLGRPCLDDTYAPTEGLKRTALSSSLRDLSDAGKRGRRN
SAGSLDSTMEVSPSD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgagcccggagagtccgaatcgtgcggtggagtacctgctggagctgaacaac
atcatcgagagccaggccaagctcctggagagccagcgccgccgcatcgaggagctcgag
acccagctggaccgggtcaaccaggagaacacgggcctgcgcttggaccaacacaactcc
tgtcccgagccaacgccggtccccatccagaaccacaccgaccagagcccaacccagccc
tcgtccctgcccctcaacccctcctcgggcacgggcactggtgctggccctctccacaac
agcaacaatggcaccggcagcactgccaccagcccgtcctcctcaacggcgccacctgct
gggctgaaccgcgagcggcggaaccacacgcgtctgacccgtgggctctcatgcggggcg
gcgccggtcgaaagggagcggactggacgactggaacggatcgacagcagcggaaccaac
acgacccccgcgccacgcagacatgtcgaggtcgagtcccggaacacagagcactccggc
accttcgcggacagccctcgtggtcaggacccctacctgcacggctccgagcgcttcggc
gacagcagcggcagcggcccccctggcccccgggtgccgtgcgtggccccccccagccca
gccagcctcacctgggcacagcacacgcgccaccagcctgccagcctagccctccgcaag
caggaggaggaggagaacaagaaatgcagggccctatccgacagctatgaactgtccacc
gacctacaggataagaaggtggagatgctggagaggaagtatggcggctacttcctgagc
cggcgtgcggcgcgcaccatccagacggccttccgccagtaccgcatgaacaagaacttc
gagcgcctgcgcagctccgcctccgagagccgcatgacgcgccgcatcatcctctccaac
atgcgcctgcagtactccttcgacgagcgcccgccgtcgctgcccgcgctgtcccagacg
cccgcgcagacgccgtacggtcagggcatgggcacccctgagctggagcccagtccctca
cccacacactccgccgggaaatacacacacctggaagactccttctccaaacaggtgaag
tccctggccgactccatagacgacgctctgacctgcagggctgggcgggacgactcccag
gacgggagcggagaggtggggggcggcagcagcgcggccgaggactacggcgagtgcgtg
tggagcaacagcagccacccgtcggcctcgccctccccctcctctcgccgggggctcggg
gagcgcggcggcggcggggggggcaggggcctcagcatgcacgaggacagcacggcgacc
tcctacagcgacgtcacgctctacatggacgacggcatgccctcctcgccgctctcgctc
gaccgcacccccagcagcaccgacacggagttctggggcatcgggggcacgggcgggggg
cgcgaggacagccgcgacacggagggcggcggcagtagcaacagccgcagaagcacgccc
tgcacggagtgccgcgactaccggctccgcgggccgcacttgccggtgctgaccatcgag
ccgcccagcgacagctcagtggacatgagcgaccgctcggaccgcggctcgctcggacgg
cagctggtgtacgaccaggagccgcccggcggggggtcgccccaggagacgctcaagcac
aacgccggccccgtccgctcggtgatgtcctcgacgacctcctcatccaccgccgtcgtc
gcgcagggtcagacacgcccacccagggcgccgctccccacccagatccccgccaacatg
gcgcaccaccaccaccaccatcaccaccaccaccatcaccactaccccgacacgccctct
tcctcctcctccccgcagcagccccccaccaccccgctctcctcctcctcctccgcgccg
ctggcgcccggcagcctggagcagccctgctgctcggacggagataacgactcgctcaac
tccaccaccaactccaacgacaccatcaactgcagctcgggctcgtcgtcgcgagacagc
ctgctggagccgatgccgccgctgggcaagcagacgtaccagagggagggccgcaacacc
tgggactcgcccgccttcaacaacgacgtggtgcagaggaggcagtaccgcatcggactc
aacctcttcaacaagaagccagagaagggcatccagtacctgatcgagcggggcttcgtg
tcggacacgccggtgggcatcgcccgcttcatcctggagaggaagggcctgagccggcag
atgatcggagagttccttggcaaccggcagaagcagttcaacaaggacgtgctcgactgt
gtggtggatgagatggacttctctggtatggacctcgatgatgctttgagaaagttccag
gcccaaattagagtgcaaggagaggcccagaaagtagagagactaatcgaggcattcagt
cagaggtactgtgtgtgtaacccacccctggtgcgtcagttccgaaacccggacaccatc
ttcatcctggcctttgccatcatcctcctcaacacggacatgtacagccccaacatcaag
ccagagaggaagatgaagatggaggacttcatcaagaacctccgaggtgtggataatggg
caggacatcccccgagatctcctggttggaatctaccagcgcattcagaagtgggagctg
aggaccaatgatgaccatgtgtctcaagtccatgctgtggagcgagtggtggtcggcaag
aagccagtgctgtctctgccccatcgcaggctggtgtgttgctgtcagctgtatgaggtg
cctgacccaaacagaccccaaaggacaggagttcaccagagagaggtcttcctcttcaac
gatctgctggtggtcacaaagatcttccagaagaagaaaacctcggtgacgtacaacttc
agacaatccttctcattggtggagatgcaagtccacatgttccagaactcctactaccct
catggtgtcagactgacgtcggccaacccaggcggggagagaaaggttctgatcgtgctc
atggctccgagtcagcaggaccgctcgcgcttcatcagcgacctgcgcgagagcatcgca
gaggtgcaggagatggagaagtaccgcgtggagactgagttggagaagcagaaaggtgtg
atgcggaccggcatgttggcgggtagcatgggtggggggttgaagaatgacgtggtgaac
ggcaccctgggaaggccctgtctggacgacacctacgcccccactgagggtctgaaacgc
accgctctcagctcctccctcagggacctatctgacgcagggaagcgcgggcgcaggaac
agtgctggttctctggacagtaccatggaagtaagtccgtccgactga
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