Clupea harengus (Atlantic herring): 105893696
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Entry
105893696 CDS
T09045
Symbol
sod2
Name
(RefSeq) superoxide dismutase [Mn], mitochondrial
KO
K04564
superoxide dismutase, Fe-Mn family [EC:
1.15.1.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04068
FoxO signaling pathway
char04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105893696 (sod2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105893696 (sod2)
Enzymes [BR:
char01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
105893696 (sod2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sod_Fe_C
Sod_Fe_N
PRRSV_Env
TDP-43_C
Motif
Other DBs
NCBI-GeneID:
105893696
NCBI-ProteinID:
XP_012675609
Ensembl:
ENSCHAG00000024076
UniProt:
A0A6P3VLV4
LinkDB
All DBs
Position
15:complement(14483264..14488703)
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AA seq
226 aa
AA seq
DB search
MTMLCKVSFVRRCTTTLSPVVGALASRQKHTLPDLTYDYGALEPHICAEIMQLHHSKHHA
TYVNNLNVTEEKYQEALAKGDVTAQVALQPALKFNGGGHINHTIFWTNLSPNGGGEPQGE
LMEAIKRDFGSFQKMKEKMSGATVAVQGSGWGWLGLDKDSGRLRIAACSNQDPLQGSTGL
IPLLGIDVWEHAYYLQYKNVRPDYVKAIWNVVNWENVNDRFATAKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctatgcaaagtcagttttgttcgcaggtgcaccaccaccttgagcccggtt
gtgggagctctggcctcgcggcagaagcacaccctcccggacctgacttatgactacgga
gcgctcgaacctcatatctgcgccgaaatcatgcaactgcaccacagcaagcaccatgcc
acctacgtgaacaacctcaacgtcacggaggagaagtaccaggaggcgttggccaagggt
gatgtgactgcccaggtggcgctgcagcccgccctgaagtttaacggaggaggccacatc
aaccacaccatcttctggacaaacctgtccccgaatggaggaggagagccgcagggcgag
ctgatggaggccatcaagcgggactttggctccttccagaagatgaaggagaagatgtct
ggtgccaccgtggcggtgcagggctctggctggggctggctgggcttggacaaggacagc
ggccgcctgaggatcgccgcctgcagcaaccaggaccccctgcagggctctacagggctc
atccccctcctgggtattgatgtttgggagcatgcctactatctccagtacaagaatgtg
aggccagactacgtaaaggccatttggaacgtggtcaactgggaaaacgtcaacgaccgc
ttcgcaactgccaagaagtag
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