Clupea harengus (Atlantic herring): 105893752
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Entry
105893752 CDS
T09045
Symbol
ube4a
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105893752 (ube4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105893752 (ube4a)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105893752 (ube4a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
U-box type E3
105893752 (ube4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
105893752
NCBI-ProteinID:
XP_012675663
Ensembl:
ENSCHAG00000022165
UniProt:
A0A6P3VLX9
LinkDB
All DBs
Position
17:21642533..21657137
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AA seq
1076 aa
AA seq
DB search
MTDQGNNNQNISRNPFAALFSSLADAKQFALGQKQQEHSKPPLEDSGDSQSESENSVSDS
IEDNDDSVAEISRSFRSRQELCEQLNVNHMIQRIFLITLDNSDPSLRGGNGIPSRCVFLE
EMAADLDGQDWLDMDSIEQALFSRLLMLEPGNHLIYMTSCNAVNLSADRDAGDKCAVPYL
YACYQRAKEEVTKVPEKLLSFAVHCKNLIVSNARTVLLTPEIYISQNVYEQLLDLLLEGV
NSAQLDLVVEFLDEVIAGLLTDQEVRTFGEVMVPVFDIFQGRVKDLDLCQLLLYSYLDVF
LYFSQQKDIAKVLVEHIQPKDPSNGLQYQKTLLGTILNISCLLKTPGVVENHGYFLNPSR
SSPQEMKVQESNIHQFMGQFQDKLHLILKNLLQQSSETRHLLLSWLGGCLQANTGRTKIW
ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCRPNSPKLLTFNPTYSALGELSEDERRN
RNVHARGLDKETCLIPIPPQQNVEFAQSYSLLTENLILTQLTLHIGFHRLHDQMVKLNQS
LHRLQGSWREAQLSGGPAAEQLREQFEHLMTVYLSTKAAATQPAMLQNCLNLQASCASLL
VQVGLNNQGPEHIPLRFPLPPLNNSHLCYVPEFFVDNLGDFFIFLRRFADEVLETSAESL
EQVLNFITMFLGNVERMSNPHLRAKLAEVLEAVMPHMEAAASGTTQPIMFQRQRVFCTYC
HAPCLAEALMTVFVDIEFTGDPHQFEQKFNYRRPMYSILKYMWNTESYRESIKRLATYAS
ENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQFLSKIKVLQLERDRGAWDDLLPDARREKE
SSLQMLGQLGRFHNIMSNETIGTLAFLTSEIKGIFVHPFLAERIISMLNYFLQHLVGPKM
GALKVKDFSEFDFKPHQLVSDICTIYLNLGNEENFCASVPKDGRSYSPTLFCQTARVLKK
INKPGEMIVSFSLLADKIKSLADRHQQEEETYSDAPDEFLDPIMSTVMLDPVILPSSNVT
VDRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELKQQILQWLAEHKKEIQQMGPSG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggtaataataaccagaacatctccagaaacccatttgcagccctcttc
agttctcttgcagatgcaaagcagtttgcattgggtcagaaacaacaagagcacagtaaa
ccaccattggaagactcgggggatagccaatcagaatccgagaattctgtgtctgacagt
atcgaggacaatgatgactctgtggctgagataagcaggtccttccgatccaggcaggag
ctatgtgagcagctaaatgtcaatcatatgatccagaggatcttcctcatcacactagac
aacagtgatccaagtctcagaggaggcaatggcatcccttcacgttgtgtgttccttgag
gagatggctgctgaccttgatggacaggattggcttgacatggacagtattgagcaggct
ttattcagcagactgctgatgttggagcctggcaatcacctcatttacatgacatcatgc
aatgcggtgaacctgtctgcagaccgagatgctggcgataaatgcgctgtaccatacctt
tatgcttgctaccaaagagccaaagaagaggtcacaaaagtgccagagaaactcttgtcc
ttcgccgtgcactgcaagaaccttatcgtgtccaacgcgcgcacggtccttctaacccca
gagatctacatcagccagaatgtttacgagcaactcctggaccttctgcttgaaggagtc
aatagcgcacagcttgacctggtagttgagtttctagatgaggttattgccggcctgctg
actgaccaggaggtgcgcacctttggggaggtgatggtgccagtttttgatatttttcaa
ggccgcgtcaaagacttggacctgtgccagctgctgttgtactcctacctggatgttttc
ctctacttcagccaacagaaagacatcgcaaaggttctggtagagcacattcaaccgaaa
gaccccagcaatgggttgcagtaccagaagacgcttctaggcaccatcctgaatatttcc
tgtctgcttaaaacccctggcgtggtggagaatcacggctacttcctaaatccctcacgc
tccagtccacaggaaatgaaggttcaagagtccaacatccaccaattcatgggtcagttt
caagacaagctgcacctcatccttaagaatctgctgcagcagtctagcgagactcgccac
ctgctgctctcctggctgggaggctgcctgcaagccaacaccggccgcaccaagatctgg
gccaaccagatgccggaaatatttttccagatgtacgcctctgacgcgttcttcctcaac
ttgggggcggccctgctcaagctgtgccagccgttctgccggcccaactcccccaaactg
ttgacctttaaccctacgtacagcgccctgggggagctgagcgaggatgagaggcggaac
agaaacgtccacgccagaggtctggacaaggagacgtgtctgatccccataccccctcaa
cagaatgtggagtttgcccagtcatatagcctgctcacagagaaccttatcctcacacaa
ctcacccttcacataggcttccacagacttcacgatcagatggtgaagctgaaccagtca
ctgcaccggttgcagggctcgtggcgtgaggcacagctgagcggggggcccgccgccgag
cagctgcgcgagcaattcgagcacctcatgaccgtctacctgtccaccaaagcggccgcc
acgcagcctgccatgctgcagaactgcctcaacctccaggcctcttgcgcctctctgctc
gtgcaggtgggcctcaacaaccagggccccgagcacatccccctccgcttccccctgccc
ccgctcaacaacagccatctctgctacgtgccagaattctttgtggacaaccttggagac
ttttttatcttcctgcggcggtttgctgatgaggtccttgagacgtcagctgagagtcta
gagcaggtcctcaacttcatcaccatgttcttgggcaacgtggagagaatgtccaacccc
cacctgcgcgccaaactggcagaggtactggaggccgtcatgccacacatggaggcggcc
gcatcgggcactacccagcccatcatgtttcagcgtcaaagggtcttctgcacatactgc
cacgccccctgcctggctgaggcacttatgactgtttttgtagatattgagttcaccggt
gatcctcaccagtttgaacagaagtttaattacagaaggccaatgtactcaattctgaag
tatatgtggaacactgagagctatagagagagcattaagcgtcttgccacatatgcatct
gaaaacctggaagccatgaatcctcctctatttctgcggtttctgaatctcctgatgaat
gacgccatcttcctgctcgatgaggccatccagttcctgagcaaaatcaaagtgctgcag
ctggagcgagatcgtggcgcatgggacgatctcctgcccgacgcccgcagagagaaggag
tccagtctgcagatgttagggcagctgggccgcttccacaacatcatgtccaacgagacc
atcggcactttggctttcctcacatcagaaataaagggtatttttgttcaccccttcttg
gctgagaggatcatctccatgctgaactacttccttcaacacctagtagggcccaaaatg
ggtgccctgaaggtgaaagacttcagtgagtttgacttcaaacctcatcaactggtctct
gacatctgtaccatctacctcaatctgggaaacgaggaaaacttttgtgcaagtgtccca
aaggatggacgttcgtattccccaacgctgttttgccaaacagccagagtcctcaagaag
ataaacaaacctggtgaaatgattgtgtctttcagtctgctagcagacaaaattaagtcc
ctggcagaccgacatcagcaagaggaggagacctactcagatgctccagacgagttctta
gacccaatcatgtccactgttatgcttgaccctgtaatacttccctcttcaaacgtcaca
gtggatcggtccacaatagcacggcatctcctcagcgatcagaccgaccctttcaatcgc
agtcctctgaccatggatcagattcgtcccaacgaggagctcaaacaacagatcttacag
tggctggctgaacacaagaaagagatacaacagatggggcccagtggatag
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integrated database retrieval system
