Clupea harengus (Atlantic herring): 105893771
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Entry
105893771 CDS
T09045
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105893771 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105893771 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105893771 (yars1)
03029 Mitochondrial biogenesis [BR:
char03029
]
105893771 (yars1)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
105893771 (yars1)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class I (A)
105893771 (yars1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105893771 (yars1)
Prokaryotic type
105893771 (yars1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
105893771 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
105893771
NCBI-ProteinID:
XP_012675684
Ensembl:
ENSCHAG00000005805
UniProt:
A0A6P3VN97
LinkDB
All DBs
Position
19:1186263..1200666
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AA seq
537 aa
AA seq
DB search
MGEQLSPDEKFELITRNLQEVLGEDKLKQVLQERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLALRTQYYEQVIKAMLESIGVPLDKLKFVKG
TDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFCLAEKYLPSLGYTKRVHMMNPMVPGLTGAKMSSSEEESKIDLLDRKEE
VKKKLKKAFCEPGNIENNGVLSFVKHVVFPLHSEFVIKRDPKWGGDQVYTEFEEVQKDFA
AETIHPGDLKASVEAALNKLLDPIRKKFESPELRKLSSTAYPAPSKHKAKGGKGGGGGGG
GGGGAAGEEDEVIPSKLDIRVGRIISVEKHPDADSLYLEKIDVGEAEPRTVVSGLVAYIS
QEALQDRLVVLLCNLKPQKMRGIESQAMLLCASVEGEPRRVEPLDPPEGSSPGERVFVEG
YESGAPEDELKPKKKMFEKIQVDLKISGTCVAQWKEKDLMTKLGQITCRTLKGGNIS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcagctcagcccagatgagaagtttgagctcatcaccaggaacctgcaggag
gtgctcggcgaggacaagttgaagcaggtcctgcaggagcgagagctgaaggtgtactgg
ggcacggcgaccacaggcaaaccccacgtggcgtacttcgtccccatgtccaagatcgcc
gacttcctcaaggccggctgtgaggtgaccatcttgttcgccgacctgcacgcctacctg
gacaacatgaaggcgccgtgggagctgctggcgctgcggacgcagtactacgagcaggtc
atcaaggccatgctggagagcatcggagtcccgctcgacaagctcaagttcgtcaaggga
accgacttccagctcagcagggagtacactctggacgtgtaccgtctctcctccatggtc
acggagcacgatgccaagaaggccggagccgaggtggtcaagcaggtggagcacccgcta
ctgagtggcctcttgtacccaggactgcaggcccttgatgaggagtacctgaaggtggac
gctcagtttggcggagtcgatcagaggaagatcttctgtctggcagagaagtacctgccg
tcgctgggctacaccaagcgcgtccacatgatgaaccccatggtgccgggcctcaccggg
gccaagatgagctcctccgaagaggagtccaagattgacctgctggacaggaaggaggag
gtgaagaagaagctgaagaaggcgttctgtgagccgggcaacatcgagaacaacggcgtc
ctgtccttcgtcaagcacgtggtgttccccctccactcagagttcgtcatcaagagggac
cccaagtggggcggagaccaggtgtacaccgagtttgaggaggtgcagaaggacttcgct
gccgagacaatccaccccggtgacctgaaggcgtcggtggaggcggcgctgaacaagctg
ctggacccgatcaggaagaagtttgagtctcctgagctccgcaaactctccagcacagcc
tacccagcgccctctaaacacaaagctaaaggcggtaaaggaggcggaggaggaggagga
ggaggaggaggagcggcaggggaggaagacgaggtcattccctccaaactggacatcaga
gtgggccgaattatcagtgtggagaagcaccctgacgcagactcgctgtacctggagaag
attgacgtgggggaggcggagccaaggacagttgtaagcggcctggtggcctacatttcc
caggaggccttgcaggatcgactggttgtgttgctatgcaacctgaagccccagaagatg
agggggattgagtctcaggccatgctgctctgtgcctctgttgagggcgagcccaggagg
gtggagcctcttgacccccccgaggggtcgtctccaggggaacgggtgtttgtggagggc
tacgagtcaggcgcacctgaggacgagttgaaacccaagaagaagatgttcgagaaaata
caggtggacctgaagatctcaggtacttgcgtggctcagtggaaagaaaaggacctgatg
accaaactgggacagatcacctgcagaaccctcaagggtggaaacatcagctag
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