Clupea harengus (Atlantic herring): 105893779
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Entry
105893779 CDS
T09045
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105893779 (hfm1)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105893779 (hfm1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105893779 (hfm1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
105893779
NCBI-ProteinID:
XP_042559018
UniProt:
A0A8M1K9V9
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All DBs
Position
22:complement(320289..364100)
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AA seq
933 aa
AA seq
DB search
MLTGTSGPGRLRSVTEIPARFRCIFSQFPYFNHVQSKALDDILYTNRNLVASAPTGSGKT
VLFELAIIRLLMESTEPWQNVKAVYMAPMKALCSQQYENWNEKFGRLGLNCKELTGDTEI
DDIFEIQNSHLIMTTPEKWDSMTRRWKDSCLLQLIQLFLIDEVHVVKDTQRGATLEAVIS
RMKAMNTCRVFEDQRPNMNTRFVAVSATIPNISDIACWLSDSVGPATSLEMDESYRPVKL
RKVVLGFPCSNGQNDFKFDLSLNYKMANIIRTYSDQKPSLVFCSTRKGVQQSADVLARDA
RFMMSIDHKERLRKYADSLMDSKLRDLVLYGVAYHHAGIDISDRKVIENAFAKGDLPVLF
TTSTLAMGMNLPAHLVVIKSTAHYVGGACEEYSETDILQMIGRAGRPQFDTSATAVIMTK
LQTKDKYTNILSGAETIESGLHLNLLEHLNAEIVLHTISDVNMALDWIRSTFLYIRTMKN
PTYYGLSFELDKGGIEARLQDLCLKNLKALSDVGLITMDEDINIRPTETGKLMTRYCVAF
DTIRHFTSMSGMETLSDLVTMVSKSKEFSDVQLRVNEKRILNTLNKDKNRTTIRFPMEGK
IKNNEMKVNCLIQAQLGCIPVQEFGLSQDMSKIFKNGVRVSKCLAEFLSHLPQNNCSALL
NALTLAKCFRAKLWEDSPYVSRQLDKIGLSLATAMVNAGLTTFKKIEQTNARELELIVNR
HPPFGNQIRESILALPEYELRLEQLPVYSTSVGEISVTVNMNNFDQLNAKKMPLDHHYVT
VIIGDCDNNVVFFQKLSNTAFLKSGTWSKKIYIARASKGEEISIHLISSEYVGLDIHQEF
SAIFSAKPFGVEHCGPESMTTDSSALGTRGFSQEHRAQVTTHTTHFNCTDALHKDSSKLK
TEKRRCNHFCKNKEQCGHDCCAPITIGQLSVQL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcttactggcacatctgggcccggaaggcttcgctcagtgacagaaatacctgcaaga
ttcagatgtattttcagtcagtttccctatttcaatcatgtgcagtcaaaggctttagat
gatattttgtataccaatagaaatttagttgcctctgcccccacggggtcggggaaaact
gtgctctttgagttggctatcatccgattactcatggagtctactgaaccctggcagaat
gtcaaggcagtctacatggcacctatgaaagccctttgtagtcagcaatatgaaaactgg
aacgaaaagtttggacgtttaggactgaactgcaaggagttaactggagacacagagatt
gacgacatcttcgagattcaaaattctcatctcatcatgacaacaccggaaaaatgggac
agcatgacaaggaggtggaaggacagctgccttttacagctgatacagctgtttcttatt
gatgaggtacacgtggtaaaggacactcaacgtggagctacattggaggcagtcatcagt
agaatgaaagccatgaacacttgccgtgtgtttgaagatcaaaggccaaacatgaacaca
agatttgtggctgtttctgcaaccatcccaaatatttcagatattgcatgctggttatct
gacagtgtggggcctgcaacttccctcgaaatggatgagagctacaggccagttaaactc
aggaaagtggtgttgggttttccgtgttccaacggtcaaaatgatttcaagtttgatctg
tcccttaactacaaaatggccaacatcattcggacctattcagaccagaaaccatcactt
gtgttttgttctacaagaaaaggagttcaacagtcagcagacgtacttgcaagggatgcc
agattcatgatgagcattgatcataaagaaagactgaggaaatatgcagattctttaatg
gactcaaaactaagagatttagttttgtatggtgttgcatatcatcatgcaggcattgat
atatcggacaggaaagtgattgaaaatgcttttgctaagggagatctgcctgtacttttc
actacaagcactttagcaatgggaatgaaccttccagctcatctagtggtgatcaaatcc
acggcccactacgtagggggcgcatgcgaggagtacagcgagacagatattcttcagatg
attggtagagcaggcagaccacagtttgacacctcagcaactgcagtgattatgacaaaa
ttacaaacaaaagacaaatacaccaacattttaagtggagcggagactatcgagagtggc
ttgcacttaaacttgctggaacatctgaacgccgagatagttcttcacacaatctctgac
gtaaacatggcactggattggatccgctccacattcctgtatatccgcaccatgaaaaat
cctacatactatgggctctcctttgagctggataaaggtggaattgaagccagattgcaa
gatctgtgcttgaaaaatttgaaggcactgtctgatgttggtcttatcaccatggacgag
gatatcaacatcagaccaacagaaacgggaaaactgatgacaagatactgtgtggcgttt
gacaccattaggcatttcacaagtatgtccggcatggagactctgtctgatttggttacc
atggtatctaagagtaaggagttcagtgatgtacagctgagagtgaatgagaaacgaatc
ctgaacacattgaataaggataagaacaggactaccatcaggtttcctatggagggaaag
ataaaaaacaatgaaatgaaagtaaactgcctgatccaggcccaactaggttgcattcct
gtccaggagtttggactttcccaagatatgagcaaaatattcaaaaatggtgtccgagtg
agcaaatgtcttgcagagtttttgagccaccttccccagaataattgttctgccctgctc
aacgcattgacactggcaaagtgctttcgggcaaagctgtgggaagactctccttatgtc
tccaggcagttggataaaattgggttgtccctggcaacagccatggtgaatgcaggactg
acaacattcaaaaagattgagcagactaatgccagagagctggaactgattgtgaacaga
catccgccttttggaaaccaaatcagagaaagtatacttgcactaccagagtacgagctt
cgcctggaacagcttccagtgtacagcacctcagtgggagaaatttcagttactgtgaac
atgaacaattttgatcagctgaatgcaaaaaaaatgcctctggaccaccattatgtgaca
gtcatcattggagattgtgacaataatgtggtgttcttccaaaaactctccaatacagcg
tttttgaaatcagggacttggtcaaagaaaatttacattgcaagagcttccaaaggggag
gaaatcagcatacatttaataagctcagaatatgtgggactagatattcaccaggaattc
agtgcaattttctctgcaaaaccatttggagttgaacattgtggcccagagagcatgact
acggacagttcagccttagggacacgaggcttcagtcaagagcatagagcacaggtcaca
actcacacaacacatttcaactgcacagatgctttacataaagattcctcaaagctgaaa
acagaaaagcgacgatgcaaccacttctgtaagaacaaggagcagtgcggccacgactgc
tgtgctccgatcacaattggacagctctcagtccagctgtga
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