Clupea harengus (Atlantic herring): 105893914
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Entry
105893914 CDS
T09045
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105893914 (vps35l)
Membrane trafficking [BR:
char04131
]
Protein recycling
Others
Retriever complex
105893914 (vps35l)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SR-25
Motif
Other DBs
NCBI-GeneID:
105893914
NCBI-ProteinID:
XP_031424755
Ensembl:
ENSCHAG00000016268
UniProt:
A0A6P8FMV8
LinkDB
All DBs
Position
1:complement(16255907..16275769)
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AA seq
968 aa
AA seq
DB search
MAAVLWHSRVRKYEAELNACRAESVAVDISDYHPLKPIMVTESKSRRNARRGSTSSTTSS
SSSSSTAAADPLSSLLDGTDPLSLFAAASSDVPTLTHSASAGELGRRRRDREEEAVGLDF
EPWAAKRVEILARFTTTEKLSINLFMGSDKGKASSPSSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIDELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWTMCSDPNPLPEGFSPDDVNDTAKETCLNWFFKIASIRELIPRLY
VEAAILKCNRFLSRSGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMVVAPHLKDCLN
KNFFDLLATFRQIHGDSVQNQLGLQRVETPVYLTLYSPAIHWILQCVSYRAPEALLTEMM
ERCKNLGNNALLLNSVMWAFRAEFIATRTTDFIAMIKQCDEAGFPKHLLFGSLGRSLASA
DPAEAERLSILNDAWKVITKIRSPQDYISCAEIWVEFTCRHFTKREVNAVMADIIKHMTP
DRAFEDAYPQLQSVIKKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIK
HQQEPTRDPVILNALLHVCKTMHDSVNSLTLEDEKRSLAQLINGFIRLVSFGRDFEQQLS
FCVEARATFCNLEPVIIQLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSL
TSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRNISVEGKQRSSEGLLLDF
INNFMATLLVVPDHPEQGVLYLVRGLLNMVQDYTWEENSNAKVKVYLSAIPLLAAMSQES
YLYTIPKVDSNETLYGGDPKFMAEINKLCDTLIGQVLDHLQALGNGEVLRKQSTLAFSVF
NALLAHGDLRNNKLNQLAVKLWNLSHKHGHCDTRASVRTLEHIKHLAQQPELSHLSETIP
RLSLQSRA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttctgtggcactcgcgtgtgcgcaagtatgaagcggagctgaacgcgtgc
cgtgccgagtcagtggcggtggacatcagtgactaccatccgctcaagcccattatggtg
acagagtccaagtctcggcgtaacgctcggagaggaagcacctcatccaccacctcctcc
tcctcgtcctcctccacggcggcggccgacccgctcagctccctcctggacggaaccgac
ccgctgtctctgtttgccgccgcctccagtgatgtcccgacgctcacgcacagcgcctcc
gcaggggagctggggaggaggcgccgtgaccgagaggaggaggcggtggggttggacttt
gagccgtgggcggccaagagggtggagatcctggcccgcttcaccaccacggagaagctc
tccatcaatctcttcatgggttcagataaaggaaaggcctccagtcctagttctgcagtc
tcagaaaaagtgcggactcgtctggaggagctagatgatttagaagagggctcccagagg
gagctgttgaacctgtcccagcaggactatgtgaaccgcattgatgagctgaaccagtct
ctgaaggaagcctgggcctcggaccagaaggtcaaagcactgaagatcgtcatccagtgc
tccaagcttctgtcagacactgcagtcatccagttctaccccagcaagtttgtgctaatc
acagacatcctggacacctttggtcgtctggtgtatgagagaatttggaccatgtgctct
gacccaaatccactgccagagggtttctcccctgatgatgtaaatgacaccgccaaagag
acctgcctcaactggttcttcaagatcgcctccataagagaactcattcccagactatat
gtggaagctgccatcctgaaatgcaatcgcttcctgtcaagatcggggatccaggagacg
ctgccgcggctgaccgccatgatccgggggataggcgacccgctggtggccgtgtacgcc
cgagcatacctctgcagggtgggtatggtggtagcccctcacctgaaggactgtctgaat
aagaacttctttgacctgctggcgacgttccgtcagatccacggcgacagcgtccagaac
cagctgggccttcagcgcgtcgagacccccgtctacctcacgctctactcccccgccata
cactggatccttcagtgtgtgtcctacagggcaccagaggctcttctgacagagatgatg
gagagatgcaagaacctcggaaacaatgctctgctgttgaactctgtgatgtgggcgttc
cgggcggaatttattgccacgaggacgactgacttcatcgccatgatcaaacagtgtgac
gaggcgggattccctaaacatctgttgttcgggtccctggggaggagtctggcgtctgcc
gatccagcggaggcggagcgtctgtccatcctgaacgacgcctggaaggtcatcaccaag
atccgcagcccgcaggattacatcagctgtgcagagatctgggtggagttcacctgccga
cacttcaccaagcgtgaggtcaacgccgtgatggccgacatcatcaaacacatgactcct
gaccgtgcctttgaggacgcatacccacagctccagtctgtgatcaaaaagatcctgaca
tacttccatgacttctctgttctcttctccatggagcgcttcctgcccttcctggacatg
tttcagaaggacagcgtgagagtggaggtgtgcagatccatcatggaggtcttcatcaag
catcagcaggagccgacccgtgaccccgtcatccttaacgccttactgcacgtgtgcaag
accatgcacgactctgtcaattctctgaccttggaggatgagaagagatctctggctcag
ctcatcaatggcttcattcgcttggtatcgtttggccgtgactttgaacagcagctgagt
ttctgtgtggaggcgagggccaccttctgtaatctggagccggtcattatccaactcata
catacggtgaaccagctcgccatggaaacgcgccgtgtgatgaaggggaaccattcccgc
aagacggcagcctttgtgcgggcgtgtgcagcctacagcttcatcaccatcccctccctg
accagcatcttcagccgcctcaacctctacctgctctcaggacaggtggcgctggccaac
cagtgtctttcccaggcggacgcgttcctgaaggcggcggtgagcgttttaccagaggtt
ccccggaacatcagcgtggagggcaaacagcgctcctcagagggcctgctgctggacttc
atcaacaacttcatggccacactcctggttgtaccggaccaccctgagcagggtgtgttg
tatctggtgcgcggcctgttgaacatggtgcaggactacacctgggaggagaacagcaac
gccaaggtcaaagtgtacctcagtgccatccccctattggctgctatgagtcaggagtct
tacctgtacactatacctaaagtggactccaatgagactctatacggaggagaccccaag
ttcatggccgagatcaacaagctgtgtgacactctgattggtcaggtgctggatcacctc
caagcccttggcaacggagaggtcttgcgtaagcagagtactctagccttcagtgtgttt
aatgcacttctggcccacggcgatctgcgcaacaacaaactcaatcagctggcagtcaaa
ctatggaacctcagtcacaaacatggtcactgtgatacacgcgcgtcggtgcggaccctg
gagcatatcaaacacttggcccagcagcctgagctcagccacctgtcagagaccatcccc
cgcctctctctgcagtcacgagcatga
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