Clupea harengus (Atlantic herring): 105893925
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Entry
105893925 CDS
T09045
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105893925 (mms19)
03400 DNA repair and recombination proteins [BR:
char03400
]
105893925 (mms19)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105893925 (mms19)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
105893925 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
Adaptin_N
IFRD
Motif
Other DBs
NCBI-GeneID:
105893925
NCBI-ProteinID:
XP_031424737
Ensembl:
ENSCHAG00000017534
UniProt:
A0A6P8FNN8
LinkDB
All DBs
Position
1:complement(16292560..16315060)
Genome browser
AA seq
1040 aa
AA seq
DB search
MLRWLKVNARSSRMATDSTLLLGLVEEFVSGQQDTKATETAKGVKTGQFTVLQLVEALGL
SLTSSQQETRARGVKLLSQVLQECYSYLNEREVEVLVAFYENRLKDHYVIIPPVLQGLKA
LTKSSALPPGSAVSILKSVFQDTHVQSLMIQERSCVYNILMNLMESREQELKGLGSDFVF
GFVQSMDGERDPRNLLLSFQIAGNIIAHGYEMGKFTEELFEVTSCYFPIDFTPPPNDPHG
ITQEDLILSLRAVLTGTPLFAEFLMPLIIEKLDSDVQSAKVDSLQTLAACGPVYGHKELA
QFLSGLWSSLRREVFQTASERVETAALSALSALTACLSRSVISSDSDDSLHTLLDLVLKD
CQHHLLEPDLKLVWPSAKILQAVGGASYRACLRVGSAVVPLLLEQYINRTQSAQRRTLLE
VLQGFIQPTEASRPAEGEENVLLPFQSSLCGVVFSALSESGAGLQTTATRILTALGQQSG
VLTPPDVDLAVDHLTTLILQEDDPQVSGAVVECCGSLAPLHPSAFTSRMVPKLKEHIFTE
PMVQGNGPSPDELGSQNAVRQRCVTALARVACEPSLVQESTPVLLQVLTAAHTGGGSFSV
DEVISVCHSLQRIAEHAPHMEAEIGQFFHDVIIPRLLGLALQAAVQDEGPCGRSPLVEEA
VLSAVAPVISSCCSRLNADCAKLSASRAVSLFLNGDVAFLPNNNLPTNTQLLKTPSPQVS
QLVCLLTASVCSLPRSVEIPEIDRLLKDLEEVSCTHTHSFTHTFAAKCYAGLINKRPNGP
ALDAVLERSMKRVSVELDNSASCLRTQALTLLLWVTKALLLRYHPLSTTLTDKLFSLLSD
RALGPLVADGFSLLMSDSSDVLNRSCHADVRIMYRQRFFSENSAKLVQGFNSAPPEEKAG
YLKALSHIMNNLPREVQMTELPALLPLFLEALSCPDVGVQLSTLSCLQPVLLDPPSALTN
QLESLIPRVLTLTTSRAMKVRITSLRCVHSLSRLPDHMLLPFRARVLRALAAPLDDKKRL
VRKEAVLARGEWFLLGSPGR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatggttaaaagtgaatgcacggtcgagcagaatggctacggacagtactctg
ctcctcggcttagtggaggaatttgtttcgggacagcaggacaccaaagccacagagact
gctaaaggagtcaagactggtcaatttactgttttgcagctggtggaggcattgggattg
agtctgaccagctctcagcaggagacacgtgcccgaggggtcaagctcctgtctcaggtc
ctgcaagaatgttacagctacctgaacgagagagaggtggaggtcctggtagcgttctat
gaaaaccgactgaaagatcactatgtcatcatcccacccgttcttcagggactcaaggct
ctgacaaagtcttcagctttgccgcctgggtcagctgtgtccatactgaaatctgtcttc
caggatacacatgtgcagtctctgatgattcaggagcgatcatgtgtgtacaacatcctg
atgaacctgatggagtctcgagagcaggagctgaagggtctgggttcagacttcgtcttt
gggtttgttcagtcgatggatggcgagcgtgatccacggaacctcctgctgtcgttccag
atcgctgggaacattatcgcccatggctacgagatgggtaaattcacagaggagctgttt
gaagtcacatcctgctatttccccatagacttcacaccgcctcccaatgatccacacggg
ataacacaggaggatctcatcctatctctcagagctgtgctgactggaacgccactgttt
gctgagttcctgatgcccctcatcattgagaagctggactcagatgtgcagagtgccaaa
gttgactctctacaaacactggctgcctgtgggcctgtgtacggacacaaagagctggcc
cagttcctgtcaggcctctggtcatctctacgcagagaggtgttccagactgcgagtgaa
cgcgtggagacggctgctctgtctgctctgagcgctttgactgcttgtctgtctcggtcc
gtcatctcctcagactccgacgactcgctgcacacactcctggacctcgtgctcaaagac
tgtcagcaccacctgttggagccggacctgaagctcgtctggcccagtgccaagatcctg
caggcggtgggcggagcttcatatagggcgtgtctgagggtgggatccgctgtggttccg
ttgctgctggagcaatacatcaacagaacacagagtgctcagcggcgcaccctactggag
gtgctgcaggggttcatccagcccaccgaggccagcagacctgctgaaggagaggagaac
gtcctgctgccgttccagtcgtctctgtgtggtgtggtgttctccgccctcagcgagagt
ggagcagggctacagaccacagccacacgcatactcaccgccctgggacagcagtcaggt
gtgctgacccctcctgatgtggacctggcggtggatcacctgaccactctcatcctgcag
gaggacgaccctcaagtcagtggggccgtagtggagtgttgtgggtccctggctcctctt
cacccttcagccttcacctccaggatggtgcccaaactcaaggagcacatcttcactgag
ccgatggtccaggggaatggcccctctccagatgagttgggctcccagaatgccgtgcgg
cagaggtgtgtgactgcgctggctcgtgtagcgtgtgaaccgagcctggtgcaggagagt
acacctgtgttactgcaggtgctgacggctgctcacacaggtggcggctctttctcggtg
gatgaggtcatctctgtgtgccacagtctgcagaggatagcagagcacgccccacacatg
gaggcagagattggccagttcttccatgatgtcatcattccgcgactgctggggctggcc
ttacaggctgcagtacaggatgaagggccttgtgggcggagtcctcttgtggaggaggcg
gtcctttctgctgtggctccagttatcagcagttgctgctctcgtttgaatgcagactgt
gccaagttgagtgcgtctcgagcggtttccctcttcctcaacggagacgtggcatttctg
cccaacaacaacctgcccaccaacacacagctcctaaagactccgtcccctcaggtgtcc
cagctggtgtgtctcctcacggcgagtgtgtgttcgctgccacggagtgtggagatccca
gagatcgacaggctgctgaaggatcttgaggaagtcagctgtacacacacacattctttc
acacacacatttgcggctaagtgttacgcagggctcatcaacaagaggccaaacggccct
gctctggatgcagttctggagcgcagcatgaagagggtcagtgttgagctggacaatagc
gcctcctgtctgcggacacaggcactgacactgctgctctgggtgaccaaagctctgctg
ctgcgatatcacccgctctctacaaccctgacagacaagctcttctcgttgctaagcgac
agggcgttaggccccctggtggctgatgggttctctctcctcatgagcgactcgtcagat
gtgctcaaccgcagttgccatgccgacgtgcgcatcatgtaccgccagcgcttcttctcg
gagaactccgccaaactggtgcagggcttcaactccgcccccccagaagagaaggctggc
tatctgaaggctctgtcccacatcatgaacaacctgcccagggaggtgcagatgaccgag
ctccctgcgctgctgccactgttcctggaggcgttgtcttgtccagatgttggggttcag
ctctccaccctgtcctgcctgcagcccgtgctgctcgaccccccctcagccctgaccaat
cagctggagtcgctcatcccacgagtactcacactcaccaccagccgtgctatgaaagtg
cgcataacctccctgcgctgtgtccactccctctcccgcctgcctgatcacatgttgctg
ccattccgagcgcgtgtgctccgagctctggcagctccgctggatgacaagaagagactg
gtcaggaaggaggcagtactcgcccgaggggagtggttcctgctaggaagcccaggaagg
tga
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