Clupea harengus (Atlantic herring): 105893939
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Entry
105893939 CDS
T09045
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105893939 (sorcs2)
Membrane trafficking [BR:
char04131
]
Protein recycling
Others
Others
105893939 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
BNR_6
InlK_D3
DUF6786
Motif
Other DBs
NCBI-GeneID:
105893939
NCBI-ProteinID:
XP_031441090
Ensembl:
ENSCHAG00000006975
UniProt:
A0A6P8H1Q9
LinkDB
All DBs
Position
18:6331043..6546013
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AA seq
1181 aa
AA seq
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MAQRVARLRPRGTVLTLRPYWALIFASAWMALSTEPALCDSGGFLKRSSGGDRALDSGAT
DDVGGGMPYLPGFIHQDADPGGAAVPRRLRRAAVRDKVSLLSSSFVLKGDATHNQAMVHW
TGENSSVILILTKYYHADSTKVLESSIWRSSDYGTTYTKLNLMAGTTIIVTNFYICPSNK
KKVILVSHNINEAEHMLFISTDEGSSFQRQPLNFRVDTLLFHPKEEDKLLAYSKDAKLYV
ASDLGRKWTLLQERVTKDHVFWSVPEVDVDPDLVHMEMQDTSGGFLYVTCLIQNCSDKMV
TAQFLGKIDRDSLTVQDEYIFVKVTTGNRTKHYVSFKRNEFVQMRFPKYALPKDVQIVST
DENQVFLALQEWYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEESVLIDILEVRGVKGV
FLANQKVEGKVKTLITYNKGRDWESLAPPTIDMNGKPVTCKPPDCQLHLHLRWADNPYVS
GTVHTKDSAPGLIMGAGNMGSQLVEYKEEMYVTSDCGRTWRQVFEEEHHILYLDHGGVIV
AIKDTSIPLKILKFSIDEGRTWSVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDW
ELVKVDFRQSFPRQCTEADYDSWKLTDQQGEKCIMGQERTFRKRKDTSFCIKGKSYTSSL
TSKPCQCTEKDFNCDYGFERAQSLKAEGDRCFADFWHDPDAPPEDCHIGHTYESSTGYRK
VISNLCEGGVNKQQSAKQHTCPLLPPAQLQLGIKGQMLAVAPGDDITFIVHQEQGDTSNT
KYQVDLGDGVRAIYQNLTVTDEPIQHRYESLGVYRVTVRAENNAGHDHATLYIQVTAPLQ
EVHLEVVPIAGKNQEVNLTATVLPAEANLTVFYWWIGDDLQPKLTLERTLLTRFTEPGEV
SVTVQASNGRSMVQDTKTVRVYDHFQMIPLSFSKNLDRFNPNIPEWREDIGQVVTKILAK
NTGIPQDSLVTMVKPGLPTTADLYVLPPESTPAKRSVYVDKRISTITQVLNENNVSFIVR
GGLQVLVSLADPNAVSFKGVVANDSTTTGAEIGSRSGAASPGVWALAVILLLSLVASGAF
MLYKFKRKDYKSHDPLLRTEERSLIHPWLHFRKLPGRNVYAQMHNEKEQEMTSPVSHSED
TQNIIQGEEFIDDDLDSQTLGNHSGVVLSINSRELHSYLTS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgcgtggcacgtctgcgtccgaggggaaccgttcttaccctgcgcccgtat
tgggctctgatatttgcctctgcctggatggcattgtcaacggaaccggctctttgtgac
agcggcggatttttgaaacgcagcagcggaggggatcgtgcgcttgacagtggtgcgact
gacgacgtcggaggtggaatgccgtatctgccgggattcatccatcaggacgctgacccg
ggtggagcggcggtcccccggcgtctcagaagagcggcggtccgggataaagtctcattg
ctcagcagctcgttcgtgctcaagggagatgccacgcacaaccaggcgatggtacactgg
acgggcgagaacagcagcgtcatcctcatcctcaccaagtactaccatgccgattccacc
aaggtgctggagagctccatctggaggtccagtgattacggcaccacctacaccaagctg
aatctgatggcaggaacaaccatcattgttaccaacttctacatctgtcccagcaataag
aaaaaggtgatcctggtgagccacaacatcaacgaggcagagcacatgctgttcatcagc
accgacgagggctcctccttccagcggcagcccctcaacttcagggtggacacgctgctc
ttccaccccaaagaggaggacaagctgctggcctacagcaaagacgctaagctctacgtt
gccagcgatttgggacgcaaatggacactgctacaggagcgggtcaccaaggaccacgtg
ttctggtctgtccctgaggtagacgtggatcctgacttggttcatatggagatgcaggac
acaagtggaggtttcctctatgtgacgtgtctgatccagaactgctccgataagatggtg
accgctcagttcctggggaaaatcgatcgcgactccctgaccgtacaagacgagtacata
tttgtgaaggtgaccacaggaaaccggaccaagcattacgtctccttcaagaggaacgag
tttgtccagatgcggttccccaagtacgccctgcccaaggacgtgcagatcgtgagcacg
gatgagaaccaggtcttcctggcgctgcaggagtggtaccagacggacacgtacaacctg
taccagtcggacccgcagggcgtctactactccatcgtcctggagaacgtgcgcagcacc
aagcagcccgaggagagcgtgctcatcgacatcctggaggtccgaggggtcaaaggtgtc
ttcctggccaatcagaaagtggagggcaaggtgaaaaccctcatcacctacaacaaaggg
cgggactgggagtcgctggctccgcccaccattgacatgaacggcaaaccagtgacgtgc
aagccgcctgactgtcagctccaccttcatctgcgctgggcggacaatccctatgtttct
ggaacggtccacaccaaagactcggcccctggcctcatcatgggcgcaggtaacatgggt
tcccagctggtggagtacaaagaggagatgtatgtcacctcggactgtggcaggacatgg
agacaggtgtttgaggaggagcatcacatactgtaccttgatcacggcggagtcatcgtt
gccattaaggacacatccatcccactcaaaatcctcaagttcagcattgacgaaggacgc
acgtggagcgtccacaacttcaccagcacatccgtgtttgtggacggtctcctcagcgaa
ccgggagacgagacacttgtcatgacggtgtttggccatatcagctaccggtctgactgg
gagctggtgaaggtggatttccgtcagtccttccccaggcaatgcacagaggctgactat
gactcctggaaactcacagaccagcagggagagaagtgcatcatgggccaggagcggact
ttcaggaagaggaaagacacttccttctgcatcaaggggaagagctacacgtcgtcgctt
acctccaaaccctgccagtgtacagagaaggacttcaactgtgactatgggtttgagaga
gcccaaagtctgaaggccgagggtgaccgttgcttcgctgatttctggcacgaccctgat
gctccgcccgaagattgccacataggacacacctacgagtccagcacagggtaccgtaag
gtgatctcaaacctgtgtgaggggggtgtgaataaacagcagagcgctaagcagcacacc
tgccccctgctgccaccggctcagctgcagctcggcatcaagggacagatgctggccgtg
gcgcccggtgatgacatcaccttcatcgtccatcaggagcagggcgacaccagcaacact
aaataccaggtggacctgggggacggggtgcgggccatctaccagaacctgaccgtgacg
gacgagcccatccagcaccgctacgagagcctgggggtctaccgcgtcaccgtgagggcc
gagaacaacgccggccacgaccacgccaccctctacatccaggtcacagctcctttacag
gaagtgcacctggaagtggttcctattgctggtaaaaaccaggaagtgaacctgactgcc
acggtgcttcctgcagaggctaacctgactgtcttctactggtggattggtgatgacctg
cagcccaaactcaccctggagaggactctgctcacgcggttcaccgagcctggtgaggtg
tccgtcaccgtccaggcctccaacggccgctccatggtgcaggacaccaagaccgtgcgt
gtgtacgaccatttccagatgattccgctaagcttcagcaagaacctggatcgcttcaac
cccaacatcccagagtggagggaggacattggccaggtggtcaccaagatcctagccaag
aacactgggattccgcaagattctctggttaccatggtgaaacctggcctgccaaccaca
gcagacctgtatgtgcttccccccgagagcacgccagccaagaggagtgtgtatgtggat
aagcgtatctccaccataacacaggtgctgaacgagaacaacgtgagcttcatagtgcgg
ggaggccttcaggtgctggtatccctggccgacccaaatgcagtgtctttcaaaggagtg
gttgctaatgattcaaccacgacaggcgcagaaatcggttcgcgctctggggcggccagt
ccaggtgtatgggctctggctgtcattcttcttctcagcctggtggccagtggagccttc
atgctctacaagtttaagaggaaagactacaaatcccatgaccccctgctgaggacagag
gagcgcagcctaatacatccctggctgcatttcagaaagctgcccggcaggaacgtctac
gcccagatgcacaatgagaaggagcaggagatgaccagcccggtcagtcatagcgaggac
acacagaacatcatacagggcgaggagttcattgacgacgacctggactcacagacactg
ggcaaccattcgggcgtggtcctgagcatcaactccagagagctgcacagctacctgacc
agctga
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