Clupea harengus (Atlantic herring): 105894035
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Entry
105894035 CDS
T09045
Symbol
atp2a1l
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04148
Efferocytosis
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105894035 (atp2a1l)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105894035 (atp2a1l)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105894035 (atp2a1l)
04261 Adrenergic signaling in cardiomyocytes
105894035 (atp2a1l)
Enzymes [BR:
char01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
105894035 (atp2a1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
105894035
NCBI-ProteinID:
XP_012675963
Ensembl:
ENSCHAG00000005443
UniProt:
A0A6P3VMU0
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Position
23:complement(21353749..21371486)
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AA seq
996 aa
AA seq
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MEDAFTKEPAEVVAHFGVNSESGLTPEQFKKQLDKYGFNELPAEEGKSIWELIFEQFEDL
LVRILMLAACISFVLAWFEEGEETVTAFVEPLVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVFRSDRKSVQMIKARQIVPGDLVEVSVGDKVPADIRIISIKSTTLRVDQSIL
TGESVSVIKHTDAVPDPRSVNQDKKNMLFSGTNIAAGRATGICTATGVATEIGKIRDQMA
ATVQEKTPLQAKLDEFGEQLSKVITLICIAVWAINIGHFNDPIHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MCVTKMFIIDKVDGDHVNLNKFDISGSKYTPEGEVSQGGSKTKCGQHDGLVELATICALC
NDSSLDWNDSKGIFEKVGEATETALCCLVEKMNVFNSSVSGLSKADRANACCSVIKQLMK
KNFTLEFSRDRKSMSVYCTPSKGDGGAKMFVKGAPEGVIDRCAYVRVGTTRVPLTPAVKE
TILATIKDWGCGRDTLRCLALATRDTPLKVEEMVLEDSTKFINYETDLTFVGCVGMLDPP
RKEVMASIEECRCAGIRVVMITGDNKGTAVAICRRIGIFKEDEDVTGKAFTGREFDDLSY
ADQAAATRVARCYARVEPSHKSKIVEFLQKDDEITAMTGDGVNDAPALKKAEIGIAMGSG
TAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL
PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGRPPRSPKEPLISGWLFFRYMVIGGY
VGAATVGGAAYWFMYDIEGPGVTFHQLSHFMQCHGDAEDFVGIDCDIFEASPPMTMALSV
LVTIEMFNALNSLSENQSLVLMPPWVNFWLLAAMTLSFSLHFMIIYVDPLPMIFKMTHLS
VDQWLMVLKLSFPVILFDEVLKFVARNYIDVVRVAV
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgcctttacaaaggagcccgcagaagtggtggcccacttcggggtgaactcg
gaatctggactcaccccagaacagttcaagaagcaactggacaaatatggcttcaatgag
ttgcccgcggaggagggtaagtccatctgggagctgatctttgagcagttcgaggacttg
ttggtcaggatcttgatgctggctgcttgcatttccttcgttctggcttggtttgaggaa
ggagaggaaaccgtcactgcattcgttgagccccttgtcattttgcttattctcatcgct
aacgccatcgttggtgtgtggcaggaacgtaacgctgaggatgccattgaggctctgaag
gaatatgagcctgagatgggcaaagtcttccgttccgacagaaagagcgtgcagatgatc
aaggccagacagatcgtgcctggtgatcttgtggaggtgtccgttggtgacaaagtcccc
gctgacatcaggatcattagcatcaagtccaccaccctccgtgttgaccagtccatcctc
actggtgagtccgtgagtgtgatcaagcacaccgacgctgtccccgaccccagatccgtc
aaccaggacaagaagaacatgcttttctctggcaccaacatcgctgctggcagggccact
ggtatctgcacagccaccggagtcgccactgagatcggtaagatccgtgaccagatggcc
gccaccgttcaagagaagacccccctgcaggccaagctggacgagttcggtgagcagctc
tccaaggtcatcaccctcatctgcatcgccgtgtgggccatcaacatcggacacttcaac
gaccccatccacggagggtcctggatccgtggagccgtctactacttcaagatcgccgtc
gccctggctgtggccgccatccccgagggtctgcccgccgtcatcaccacctgcctggct
ctgggtacccgccgtatggccaagaagaacgccatcgtccgctctctgccctccgtggag
accctgggatgcacctccgtcatctgctccgacaagaccggcaccctcaccaccaaccag
atgtgtgtcaccaagatgttcatcatcgacaaagtcgacggcgaccatgtcaacctgaac
aagttcgacatctctggctccaagtatacccccgagggtgaagtgtcccagggtggatcc
aagaccaagtgcggtcagcacgacggcctggttgagctggctaccatctgcgctctgtgc
aacgactcttctctggattggaatgattctaagggcatctttgagaaggtcggagaggcc
actgagactgctctgtgctgcctggtcgagaagatgaacgtgttcaactccagcgttagc
ggtctgtccaaggctgatagagccaacgcctgctgctccgtcatcaagcaactgatgaag
aagaacttcaccctggagttctcccgtgacaggaagtccatgtctgtgtactgcacccca
agcaagggcgatggtggcgccaagatgttcgtcaagggagccccagaaggtgtgattgac
aggtgcgcatacgtgcgtgttggaaccacccgtgtccccctgactcccgccgtgaaggaa
accatcctggccaccatcaaggactggggttgtggcagagacacactccgttgtctggcc
ctcgccacccgtgacacccccctcaaggttgaggagatggtcctggaggactccaccaag
tttatcaattatgagactgacctgacctttgttggctgcgttggcatgcttgacccaccc
cgtaaggaagtcatggcctccattgaggagtgcagatgcgctggcatccgcgtcgttatg
atcactggtgacaacaagggtaccgctgtggccatctgccgccgtattggcatcttcaag
gaggatgaggatgtgactggcaaggccttcaccggccgtgagtttgacgacctgagctac
gccgaccaagctgctgccacccgcgttgcccgctgctacgcccgtgtcgagccttcccac
aagagcaagatcgtcgagttcctgcagaaggacgatgagattactgccatgaccggtgat
ggtgtgaatgatgcccctgccctgaagaaggcagagattggcatcgccatgggctctggc
actgctgttgccaagtcagcctctgagatggtcctggccgacgacaacttctcttccatt
gtggccgctgttgaggagggcagagccatctacaacaacatgaagcagttcatccgctac
cttatctcctccaacgttggagaggtcgtctgtatcttcctgactgctgccctgggcctg
cccgaggctctgatccccgtccagctgctgtgggtgaacctggtgactgacggtctgccc
gccaccgccctcggattcaacccccccgatcttgacatcatgggcagacccccacgttcc
cccaaggagcccctgatctccggctggttgttcttcagatatatggttattggaggctat
gtgggtgctgccaccgttggaggtgctgcttactggttcatgtacgatatcgagggtccc
ggagtgaccttccaccagctgtcccacttcatgcagtgtcatggtgatgctgaggacttt
gtgggcattgactgcgatatcttcgaggcctctccccccatgaccatggccctgtccgtg
ctggtcaccattgagatgttcaacgccctcaacagcttgtctgagaaccagtccctggtg
cttatgcccccatgggtcaacttctggctgctggccgccatgaccctgtccttctccctc
cacttcatgatcatctatgtcgaccctctgcccatgatcttcaagatgactcacttgagt
gttgatcagtggctgatggtgttgaagctctccttccccgtcatcttgtttgatgaagtc
ctcaaattcgttgcccgcaactacattgatgttgttcgggttgccgtctaa
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