KEGG   Clupea harengus (Atlantic herring): 105894046
Entry
105894046         CDS       T09045                                 
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105894046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105894046
   03400 DNA repair and recombination proteins [BR:char03400]
    105894046
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     105894046
   Cul5 complex
     105894046
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105894046
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 105894046
NCBI-ProteinID: XP_012675972
Ensembl: ENSCHAG00000004160
UniProt: A0A6P3VMJ3
LinkDB
Position
23:21180474..21186389
AA seq 119 aa
MDVFLMIRRHKATIFTDAKESTTVYELKRIVEGILKRTPEDQRLFKDEQLLDDSKTLGDY
GYTNQTARPQAPATVGLAFRLTGDTFEPLQVEPFSSPPELPDVMKPQDSGSTANEQSVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtctttttaatgatccggcgtcacaaggcgacaattttcactgacgccaaggag
tccacgaccgtgtacgagctcaaacgtatcgtggaggggatcctgaagagaacccccgaa
gaccagagacttttcaaggatgaacagctgctggatgacagtaagactctgggtgactac
ggctacaccaaccagactgctcgtccacaggctcccgctactgttggactagccttccgc
ctcaccggcgacacctttgagcccctgcaggtggagcccttctccagtcctccagagctc
ccagacgtcatgaagccccaggactccggcagcaccgccaacgagcagtccgtgcagtga

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