Clupea harengus (Atlantic herring): 105894074
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Entry
105894074 CDS
T09045
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105894074 (chd1l)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105894074 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
ERCC3_RAD25_C
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
105894074
NCBI-ProteinID:
XP_012676002
Ensembl:
ENSCHAG00000023830
UniProt:
A0A6P3VMK8
LinkDB
All DBs
Position
10:complement(8089569..8112911)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSTFVRRASKIPDKDISDLSENDLKRWGLIGIQLRSYQLDGVRWLTQCLKHQEGCILGDE
MGLGKTCQTISLLVYTKGALGEAGPFLVLSPLSVLENWRQEMQRFSPSLSVVCYTGDKER
RAELQRELLDDGHFHVLLTTYEMCLKDASFLRRWKWKILVVDEAHRLKNQNSLLHQTLNQ
FSVGFRVLLTGTPIQNNLQEVYSLLSFIQPSLFPGDQVESFVSTYADVQTCPALAAELHR
VLQPFLLRRVKAEVAAELPKKTELVMFHGMSALQKKYYKALLMKDLDAFGAEQASKTRLL
NILMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLVLLDSILAYLRKEGHRVLLFSQM
TRVLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFVFLLSTKAGGVGLNLTA
ADTVIFVDSDFNPQNDLQAAARAHRIGQTRAVKVIRLVGRDTVEEIVYRRAISKLQLTNT
VIEDGRFSLLDQAQSAAAGLQLSDILKFGVDKLLASEESSVQDVDLGLILGQSRNGRWLT
EDDPVIPLEDEEAESDTDGQNHMYYFEGRDYSRDPSTEDQEAFTSLLQEQLTQLQEAGNE
GRALRCTTGASLAGPLRSPMRLKRPLSADELEQRRQRRQEAAAKRAKLMDERKKRQEEQR
QLKRKAWWESCGYTSMCLPALDSEGEDEEEDDGDEDAASTCSTDSEHMAIRYVLGDVTHP
HTAKEDAIIVHCVDDCGRWGRGGLFTALELRSDEPRKQYELAGKMKDLELGHVLFFPIND
KQSRLDGKDHLALIVAQTRDKANNLSGILLSALEEGLRKISRVAKGMRASVHLPRIGHST
KAFNWYGTERLIRKHLVTRGIQTSIYYYRRAASVNTTASNSTPSTSAHQSACDRGVSPPA
RRELPSSPVSQHSSSPEGAAMGDGFQEPAGSSCSPATFSLSDFMRGVHVFFFNMAASDRK
RLSRYLITYDGHEEDLMSARVTHVVAEVDSPAHTQELRELVHQYPQALPVQMTWLESCLS
KQKKVNTSSFLHKLQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttgttcgaagagcgtctaagataccagataaagatatctcagatctgtcg
gaaaatgatctaaaacgctgggggttgataggcattcagctgaggtcctatcagttggat
ggtgtgaggtggctgactcagtgcctgaaacatcaggaaggttgtattttaggggatgag
atgggccttggtaagacatgtcagacaatatccttgttggtttacaccaaaggagctctg
ggtgaagcagggccttttctggtgctgagtccactgtctgtgctggagaactggagacag
gagatgcaacgcttctcccccagcctctcggtggtgtgttacaccggtgacaaggagagg
agggcggagctacagagggagctgctggatgacggacactttcatgtcttactcactacc
tatgagatgtgccttaaagatgcttcgtttttaagaaggtggaagtggaagatcttggta
gtggatgaggcacacaggttgaagaatcagaactctttgttacaccagacactaaaccag
ttctcagtgggctttagggtgctgctcaccggcacgcctatccagaacaacctgcaggag
gtctactcgctgctcagcttcatccagcccagcctttttcctggtgaccaggtggagagc
ttcgtcagcacctatgcagatgtccagacctgcccagccctggcggccgagctccaccgc
gtcctgcagcccttcctgctacgaagggtcaaggccgaggtggcggccgagctgcccaag
aagacggagctggtgatgtttcacggcatgtcggccctgcagaaaaaatactacaaggcc
ctcctcatgaaggacctggatgcctttggggccgaacaggccagcaagaccagactactg
aacattctcatgcagctgaggaagtgtgtggaccacccttacctatttgatggtgtggag
ccagagccctttgagatgggtgaacatctggtggaggccagtggcaaactcgttctactg
gacagtattttagcatatctgcgcaaagagggccatcgtgttttgctgttttcccagatg
accagagtgctggacatcctccaggactatttggaatacagaggttacagctatgagcgt
ctggacggctccgtacgtggcgaggagcgtaacctagcgatcaagaacttcagcaccaag
gatgtctttgtcttcctcctcagcaccaaggctggtggtgtaggcttgaacctcacagct
gctgatacagtcatatttgtggacagtgacttcaacccgcagaatgacctccaggctgct
gcccgagcccaccggattggccagacaagggcggtgaaggtgattaggctggtgggccgg
gacacggtggaggagatcgtctacaggcgcgccatcagcaaactgcagctcactaacacc
gtgatcgaggacgggcgcttctcgctgctcgaccaggcccagtctgctgccgccggactt
cagctgagtgacatcctgaagtttggggtggataagctactagcgtcggaggagagctcg
gttcaggatgtggacctgggactgatcctgggtcagtctcgcaacggccggtggctcact
gaggacgatcccgtcatcccgttggaggatgaagaggcagaatctgacaccgatggccag
aaccacatgtactactttgaggggagggactactcacgggaccccagcactgaggaccag
gaggccttcacctccctgctgcaggagcagctgacccagctgcaggaggctggcaacgag
ggacgggctctgcgctgtacaactggagcatctctggcggggcccttgcggagccccatg
aggctgaagcggcccctgagcgcggatgagctggagcagcggaggcagaggaggcaggag
gccgccgccaagagggccaagctgatggatgagcgcaagaagaggcaggaggagcagagg
cagctcaagaggaaggcctggtgggagtcatgcgggtacacatccatgtgtttacctgct
ctggactcggagggtgaggacgaggaagaggatgatggagacgaagatgctgctagcacc
tgctccactgactctgagcacatggccatacgttacgtgctgggcgacgtcacacacccg
cacacagccaaggaggacgccatcattgtacactgcgttgatgactgtggccgctggggc
agagggggtctgttcactgcactggagcttcggtcggacgagccccgcaagcaatacgag
ctggctgggaaaatgaaagacttggagctggggcatgtgctgtttttccctatcaatgat
aagcagtccagactggatgggaaagatcatctggcactgatcgtggcccagactcgagac
aaggcaaacaatctctctggcatcctgctcagcgccttggaggagggcctcaggaagatc
tccagggtggccaaggggatgagagcgagtgtccatctaccccgcatcggacactccacc
aaagccttcaactggtatggcacagagaggctcattcggaaacacctggtcacaaggggc
atccagacatccatatactactaccgcagggctgcctctgtcaacaccacagcatccaac
tctacaccgtccacgtccgcccatcagtcggcctgtgaccggggcgtctcgccgccagct
cggagagaactcccgtcatcacccgtctcccagcactcctccagtcccgagggagcggcg
atgggagacggttttcaggagccagccgggtccagttgcagcccggctacgttcagcctg
tcggacttcatgcgcggcgttcatgtcttcttcttcaacatggctgcctcggacaggaag
agactgtcacgctacctcatcacatatgacggtcacgaggaggacctgatgagcgcacgt
gtcactcatgttgtggctgaagtggatagtcctgctcatacacaggagctgcgggagctt
gtgcatcagtaccctcaggccttacctgtgcagatgacctggctggagtcctgtttgtcc
aaacagaagaaggtcaacacctcctctttcctgcataagctacagtga
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integrated database retrieval system
