Clupea harengus (Atlantic herring): 105894098
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Entry
105894098 CDS
T09045
Symbol
bod1l1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105894098 (bod1l1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105894098 (bod1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
105894098
NCBI-ProteinID:
XP_031424667
UniProt:
A0A6P8FNE4
LinkDB
All DBs
Position
6:complement(4887124..4902787)
Genome browser
AA seq
1724 aa
AA seq
DB search
MAGLPPGDPQLVSMIVNHLKTQGLFDQFRRDCLADVDTKPAYLNLRQRVDNFVSNHLSNH
TWSPHLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKIHHIFRPQVERVVREFLSPG
SHVEEPPAYYPQGEDLHLPPSAVMSAPGTSANAMSILDTISSLNQDASTRAGGEKGQEGE
LDLDDAVLNGSTGEQDMSLVEDEEEEGEAVESQPEEEQEEGEKPALDVFSTEIKTEVVSE
EMDIDREAESEEVKGEEEVKEDPAEEEREIKEEEGKDKSMSRSPSKTAEEALSRDQDTSK
TINEKQNMRQKARERLKEEYSLEDSDLEGLSDITVSSVHTSDLSSFEGESDGEPQASDST
EEGEITSEDEKAEETKASADDGEENKERKPGARRQGYVHKPFLYSRYYSDSDDEDTVEQR
RRSAAKDKEERLLKRQQNRERYEEKRRNKQFQMEEQAEKKAVDDAQRPRAKEACKEKKVL
EKKVALSRKRKRDSRKEGDTGNRKKGDSEGDAMKKDDSHKVGTSRGLPSKSLRRVSESSV
SDEAHRRKSSSVSEEPGEPRKLSDKNRTHSFILDLEQGSDELLRQRPLGKFERHSRKDQH
PKDRKDKERERSVSDESVKIKQKPEKKAETHGDESSQREGPEAKASSSEDKGEKKSSKLK
VEKKRSSVSEGSAVEEGQRDVGSKKMKSPTAEAVKDKEKEKERTKGEKVAGKSDPRQPLH
PDSTGSSEERSDLELGSEGIRRKDRFLKEGLKRSRSMTDTKHVEKHRSRLDSKDSDKEKS
KGALSSPERQKPTSETEGEPRRSRDAEPGSSKGKILSEKSRSKSREESKTPTQSKPDKKA
SGQDTKSKAATSVSKTDSTKEKKKYGGAKEEKKPSEELSTEKSQETKSAKKPSEKKAKDP
EKKGDTLADRRGGKAVDVAMGSPLSPVMAMGSPLSPVMPEIPETPDSAKASEPKESSVEV
DPTAATSTPPATGVVAVSDDAFDALSDITPEPEDEDVATRLVECEEEPRPLPAEAAALLS
LMEVCSSAERSFVTETEPEPEPEPEPMSEVTPIAGLSLQEADLKMKEAALTLLSMDPDMI
LSPSLINSHMTPVATEAITPPEEQATPTVGQAGEESLVDSSGNVQGAESTQPSQEMPADE
HVHGEDVSDSIVAPVESTVVNPEETTPKDDAAEERMEEEKPSAATLASQVTSATTPSQNI
EVGNEEVRSENDQDSQSASADVSADATKPKGRRRRPSSQSLASPSETCSTLTVSDITEVA
LADSTENEAAPSSTDEEAPSESAVTESEKSEKDQTEHDVSKQDEPSQKTSVTPDETPQVM
TGPEAVLQDLPEEAQVTRGTRRGRQARLVKQSSSASQSDGQEEERGSDVSEMDDKSEGRV
TRRGRRSAAAAAKDSSKSKAEKEGSGQSDMKLATEQQVEPDPESEKAPEAPEAPEPEAPR
RGRSSRATAPPSESQQEEQGGEEAQKETEKEEETPVTRGRRSGAQTKEAPTGRTGLKRKR
SEETEDSGEEVPAEEKMTSDGAEGESSSQPSEEATGETSHDVSSSLPEGHEESKQESAAE
MKSDNLAMWEQQGEESEKPQKRTPRRGRPAKAAAASTEDTDKAAPEKKTKKGEEQEGEQK
EEEEEEEGEEEEEEEDGGEEDGVKAKPRATTRSAARLEAEKNRPTKPSTRALSKAKEGST
PNKRAKGQASTAAKGARKRDASPPTPRTRGGQKSEEPPAKRTKR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttacctccgggagacccgcagctggtctctatgatcgttaatcacttaaaa
actcaaggtctttttgatcagttcaggagagactgcttagccgacgtggatacaaagcct
gcttatttgaacttgaggcaacgtgtggacaactttgtgtcaaatcatctctcgaaccac
acatggagccctcacctcaacaagaaccaactgagaaacaacatcagacaattagttctg
caatctggaatgctcgagcagggagtggacaggattgtggctcaagtggtggatccaaaa
atccaccacattttccggccacaggttgagagggtggtccgggagttcctatcccctggg
agccatgttgaggaacccccagcatattatcctcaaggggaagacctccaccttccacct
tcagctgtgatgtcagcaccaggcactagtgcaaatgccatgtctatcctggacaccatc
agctccctgaaccaggacgcaagtactcgagcgggcggggagaagggacaggagggggag
ctggacctagacgacgctgtgctgaatggcagcaccggggaacaagacatgagcctcgtg
gaggatgaggaagaggagggagaggcggtggagagtcagcccgaagaggagcaggaagag
ggcgagaagcccgcgctggatgtgttcagcaccgagataaaaactgaggtcgtgagcgaa
gagatggacatagacagagaggcggagagcgaggaggtgaaaggggaggaggaggtaaag
gaggacccggccgaagaggagagggagattaaagaagaggagggcaaggacaaaagcatg
agtagatctccctctaagactgcagaagaggcactgagcagagatcaggacacgagcaag
accattaatgagaaacagaacatgcgacagaaagccagagaaaggctcaaagaagaatac
tccctggaggattccgatctggagggtctgagtgacatcacagtgagctctgtccacacg
agtgacctttcctcctttgagggcgagagtgatggggagcctcaggcatccgattccaca
gaggagggcgagatcacatctgaagatgagaaagcagaggagacgaaagccagcgctgac
gacggcgaggagaacaaggagcgcaagcctggggctcgtcggcaaggctacgtgcacaaa
ccgttcctctactctcgttactatagcgactcagatgatgaagacactgttgagcagcgc
cggcggtctgcggccaaagacaaagaggagagactgctgaagcggcagcagaaccgcgaa
cgctacgaagagaaaaggaggaacaaacagtttcagatggaagagcaagctgaaaagaag
gccgtggatgacgcacagagacccagggccaaggaagcgtgcaaggaaaagaaggtgctg
gaaaagaaggtggccctcagcagaaagcgaaagagagattcaaggaaggagggtgatact
ggaaacagaaagaagggtgattcagaaggggatgcaatgaagaaagatgactctcataaa
gtgggcacctcaaggggcctgccttcaaagtctctgaggagggtctcggagtcctctgtg
tccgacgaggcccacaggaggaagagcagcagtgtctcggaggagcctggtgagcccagg
aagctgtcggacaaaaaccgcacgcattctttcattctggatctggagcaggggtccgac
gagctgctccgacagaggcccttaggcaagtttgaacgacattcgcgcaaagaccagcac
cccaaagatcgcaaagacaaggagagggagcgcagcgtctccgatgaatctgttaaaatc
aagcagaaacctgagaagaaagcagagacgcacggcgatgagagctcgcagagggaaggg
cctgaggcaaaggcctcgtcatctgaagacaaaggggagaagaagagctcaaagctgaaa
gttgaaaagaagaggtcctctgtgtctgaagggtctgctgtggaggaagggcagagagat
gtcgggtcaaagaagatgaagtctcccacagcggaagccgtgaaagacaaagaaaaggag
aaagaaaggaccaaaggagagaaggtggcgggtaaaagcgatcccaggcagccccttcat
cctgattccactggatcctcggaagagagatctgacctggagctggggtcggaagggatc
aggagaaaggacagatttctcaaggagggcctgaaacgatcaaggagtatgactgataca
aagcatgtagagaagcacaggtccaggctcgacagcaaggactctgacaaggagaagtcg
aaaggagctctcagctcgcccgagcggcagaagcccacctctgaaacggagggagaacct
cggcgcagcagagatgctgagccgggatcatcgaaggggaaaattctgtccgagaaatca
aggtccaagtcgagagaggaatcaaaaactccaacacaatccaaaccggacaagaaagct
tcaggtcaagacactaagagtaaagctgctacctcagtcagtaaaacggactcaacgaag
gagaagaagaaatatggtggtgccaaagaggagaagaagccctcggaggaactttccacc
gaaaaatcgcaggagaccaagagcgcaaagaaaccgagtgaaaagaaggccaaagatcct
gagaagaagggagacacacttgctgacaggagaggaggcaaagcagtggacgtggctatg
ggttcccctctttctccagtcatggctatgggttcccctctttctccagtcatgcctgag
atccctgagacgcctgactctgcaaaggcctcagagcccaaagaatcaagcgtggaggta
gaccccaccgctgccaccagtacgcctccagccaccggtgttgttgccgtttctgacgac
gcctttgatgccctgagtgacatcaccccagagcctgaggatgaggatgtggccacacgg
ctcgtcgaatgtgaggaagagccgaggcccctgccagccgaggctgccgccctcctgagc
ctgatggaggtgtgtagctcggcagagagaagcttcgtcacggagacggagccagagcca
gagccagagccggagccaatgtctgaagtgactccaattgcagggttgtcattacaggaa
gctgacttgaaaatgaaggaagcagccctcactctgctgtccatggaccctgacatgatt
ctctcgccgagtttgattaacagtcacatgacccctgttgctacggaagccatcacccca
cctgaggaacaggccacacctaccgttgggcaggctggggaggagtcattggtcgattct
tctggaaatgttcagggagctgaaagtacccaaccatcacaggagatgcctgcagacgaa
catgtacatggtgaagatgtctctgacagcattgtggccccagtagaatcgactgtggtt
aacccagaagaaactacaccaaaagatgacgcagcagaggaacgcatggaggaagaaaag
ccctctgctgccaccttggcctctcaggtcacttctgcaactacaccatcacagaacata
gaggtgggtaacgaagaagtgagaagtgagaacgaccaagactcccagagcgcctcagct
gatgtgagcgcagatgcaactaaaccgaagggtagacgcagaaggccgtccagccagtct
ttggcctctccatcagagacctgctcgacccttactgtgtctgacatcactgaagtggcc
ctggcagactccaccgagaatgaagcggcccccagcagtacagacgaagaggcccccagt
gaatctgcggtcacagagtctgagaagtctgagaaggaccagacagaacatgacgtctct
aagcaggatgaaccctcacagaagacaagtgttactcccgatgaaactcctcaggtgatg
acaggcccagaggctgtgttacaggacctgcctgaggaagcacaggtgaccagaggaaca
cggaggggtcgccaggccagactagtcaaacagtccagcagcgcctctcagtctgacggt
caagaggaggagagggggtcagatgtgtcagagatggatgacaaatccgagggcagagtg
acccgcagaggaagacggagcgccgcagcagcagccaaggactccagtaaatcaaaggca
gagaaggagggcagtggccagagcgacatgaaattagcgacagaacaacaggtagagccg
gaccccgagagtgagaaggcgccagaggccccagaggcgccagagccagaggccccgcgc
aggggacgctcgtccagggccaccgccccaccctctgaaagccaacaggaggagcaggga
ggagaggaggcgcagaaagagactgagaaggaagaggagacccctgtcactagaggcaga
cgctctggagcccagaccaaagaagctcccacaggtaggactggtctgaagaggaaaagg
tctgaagaaacagaggattctggggaggaggtgcctgctgaggagaaaatgacctccgat
ggagcagagggggagtcttccagccagccctctgaggaggccactggtgagacgtctcat
gatgtctcatcgagtctgcctgaaggtcacgaggagagcaagcaggagagcgcagcagaa
atgaaatctgataatttggcaatgtgggaacaacagggagaggagtcagagaagccccag
aagaggacacctcgcagggggaggccagccaaggcagcagctgcttccacggaggacaca
gacaaggctgcacctgagaagaaaaccaagaagggagaggagcaggaaggagagcagaaa
gaggaagaggaggaggaggagggggaggaggaagaggaagaagaagatggaggagaagaa
gacggggttaaggccaaacccagagccacaacgcgatctgcggcgcgtctggaggccgag
aagaacagacccaccaagccctccactcgagccctgagcaaagccaaggagggaagcact
cccaacaaacgagcaaaaggacaggcctccactgcagccaagggggcgcgcaaacgtgat
gccagccccccaaccccacgtacccgaggggggcagaaatcagaggagccccccgccaaa
cgcacaaagagatga
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