Clupea harengus (Atlantic herring): 105894140
Help
Entry
105894140 CDS
T09045
Symbol
plcb3
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
char04070
Phosphatidylinositol signaling system
char04081
Hormone signaling
char04082
Neuroactive ligand signaling
char04261
Adrenergic signaling in cardiomyocytes
char04270
Vascular smooth muscle contraction
char04310
Wnt signaling pathway
char04371
Apelin signaling pathway
char04540
Gap junction
char04621
NOD-like receptor signaling pathway
char04912
GnRH signaling pathway
char04916
Melanogenesis
Module
char_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105894140 (plcb3)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105894140 (plcb3)
04371 Apelin signaling pathway
105894140 (plcb3)
04020 Calcium signaling pathway
105894140 (plcb3)
04070 Phosphatidylinositol signaling system
105894140 (plcb3)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105894140 (plcb3)
04081 Hormone signaling
105894140 (plcb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
105894140 (plcb3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105894140 (plcb3)
09152 Endocrine system
04912 GnRH signaling pathway
105894140 (plcb3)
04916 Melanogenesis
105894140 (plcb3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105894140 (plcb3)
04270 Vascular smooth muscle contraction
105894140 (plcb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105894140 (plcb3)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
105894140 (plcb3)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105894140 (plcb3)
Endocytosis
Macropinocytosis
Phospholipase C
105894140 (plcb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Legum_prodom
SAM_Exu
Motif
Other DBs
NCBI-GeneID:
105894140
NCBI-ProteinID:
XP_031441372
Ensembl:
ENSCHAG00000002669
UniProt:
A0A6P8H0W5
LinkDB
All DBs
Position
18:5872702..5918060
Genome browser
AA seq
1238 aa
AA seq
DB search
MAGAKPGVHALQLKPVSVHETLKRGSKFIKWDEEPSSGQPSLVTLKVDPEGFFLYWTGGA
NLEVEILDISHIRDTRTGKYAKMPKSPTVREVLGFGKSEGNVEAKLVTVVHGNDLVNVSF
LNFQAMQEDVAKVWTEELFKLATNILSQNSSRNTFLFKAYTKLKLQVSTDGRIPVKNFWK
MFSDKKRVESALEQCGLIANKSQVEGIKPDDFTVDMFLNFLNFLCLRPEIERIFVETGSK
GKPFLSLDQMLDFMNRKQRDSRLNEVLYPPLKREQVRQIMEKYEPNYGQLERDQISLMGF
SRYLGGEESSVVPPERLDIIDDMHQPLSHYFCNSSHNTYLTVGQLTGLSSVEMYRQVLLT
GCRCVELDCWKGRVPDEEPYITHGFTMTTEIPFKEVIEAIAESAFKTSPYPLILSFENHV
DSAKQQAKMAEYCRTIFGDALLIDPLEKYPLDPGQQLPSPVELMGKILIKNKKKHHHRTT
NGGSVRRRNTMSGDISDQASTVNDCPLSDGESNHILSNGEEKLAERMVKDSEPRKSIDVE
SEEDEEEEVVADLKKPNSDEGTASSEVMATEEMSTLVNYIEPVKFKTFEVATKRNKYYEM
SSFVETKGMDTLKSSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPHLFWNVGCQMVALNFQ
TLDLPMQLNMGVFEYNGGCGYLLKPEFMRRTDKHFDPFTENIVDGIVANTVKITIISGQF
LSERKVGVYVEVDMFGLPSDTKRKYRTRTSNNNSLDPVWPDENFVFNKVILPNLASLRVA
VFEDSGKFIGHRILPVLALRPGYHYIVLKNELNQPLLLPSLLVYIEAQDYIPNEHQEYAE
ALTNPIKHVSLGLDPEDEHVSEEEEREAFDDRPEDPNPFPSPPLPPELQDVPIPGAVVAP
KESSQSLIDTVLAVIKAQSIDELKQQKAYVKLLKKQCKELKELRRKHMRKVWSVSKEQRS
RCHKVTSDIQRRRSQAEKKLRMSIKKHEPEDPVRTELCALDVEHQKATVQLREWQMQELL
MLRQGQHQLEREKKYTHLKESYQKLKKIASDCQVTQLKKLKDICEKEKRELQKILDRKRQ
NSIIEAKKGDRERAESESNEINRKHIQESVHLIRRLEEQQVKRQDKLKLAQVEVLKSIEA
DQPVHQARLERDLEAELQRLPDEICQYLQGELESKGLCSDALFSPLANHSSPSSNCSTPP
YHSPSHSAGRSLDNSTISLADSSLSNTPVMSEAELTPV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcgaagccgggagttcacgctctgcaactcaaaccggtgtccgtccacgaa
acactgaaacggggaagcaaatttatcaaatgggatgaggaacccagcagcggccaaccc
tcgctggtcaccctcaaggtggacccggaggggtttttcctctactggaccggcggggcg
aacctggaggtggaaatcttggacatcagccatatcagggacaccagaacagggaaatat
gccaagatgccaaagagccccaccgtgcgggaggtactcggctttggcaagagcgagggc
aacgtggaggccaagctagtgacggtcgtccacggcaacgatcttgtcaatgtctccttc
ctgaacttccaggccatgcaggaggatgtggccaaggtttggacagaagagttgtttaaa
cttgccaccaacatactctcccagaactcctcgcgaaacacctttctgttcaaggcatac
actaagttaaagctacaggtgtccacagatgggagaatcccagtgaagaacttttggaag
atgttctctgacaagaagcgtgtggagagtgcgctggaacagtgcggcctcattgccaat
aagtctcaagtggaggggatcaagccggatgacttcaccgtggacatgttcctgaatttc
ctgaacttcctctgcctgaggcctgagatcgaacgcatctttgtggagacaggttccaag
ggaaagcccttcctgtctctggaccagatgctggacttcatgaaccgtaagcagcgcgac
tcgcgtctcaacgaggtgctctacccgccactcaagcgcgagcaggtgcggcagatcatg
gagaagtacgagcccaactacggccagctggagagagatcagatctctctgatgggcttc
agtcgctacctggggggagaggagagctctgtggttcctcctgagaggctggacatcatt
gacgacatgcaccagccactgtcccactacttctgcaactcctcgcacaacacctacctc
acagtgggccagctgacggggctgtcctcagtggagatgtacagacaggtgttgctgaca
ggttgccgctgcgtggagctggactgctggaagggccgagtccctgatgaggagccctac
atcacccacggcttcaccatgaccaccgagatccccttcaaggaagtgattgaggccatc
gcagagagcgcgttcaagacctcgccgtatcccctgatcctctcctttgaaaaccacgtg
gactccgcgaagcagcaagccaagatggcagagtattgtcgcaccatctttggcgatgcg
ctcctcattgacccgttggagaaatacccgctggacccaggtcagcagctgccctcgccc
gtggagctgatggggaagatcctgatcaagaacaagaagaagcaccaccaccgcacaacc
aacgggggcagcgtgaggcgcaggaacactatgagtggggacatctctgaccaggcctca
actgtgaatgactgtcctttgtctgatggcgaaagcaaccacattctgtccaatggggaa
gagaagctcgcagagaggatggtcaaagacagcgaaccccgcaaatctattgatgtggag
agtgaggaagatgaggaggaagaggtggtggcagatctcaagaagccaaactcagatgaa
ggcacggccagcagtgaggtgatggccacggaggagatgtccactctcgtcaactacatc
gagccagtcaagttcaagacctttgaagtagcaaccaagagaaataagtactatgagatg
tcctcttttgtggagaccaaaggcatggacacgctgaagagctctccgatggaatttgta
gaatacaataagaagcagctgagtcgaatctaccccaagggcacgcgggtggactccagt
aactacatgccccacctcttctggaacgtcggctgccagatggtggcgctcaacttccag
accctcgacctgcccatgcagctgaacatgggtgtgtttgagtacaatgggggctgtggc
tacttgttgaagccagagttcatgcgtcgcacagacaaacacttcgaccccttcactgaa
aacatcgtggatggcatcgtggccaacaccgtcaaaatcacgatcatctcgggccagttc
ctgagcgagaggaaggtgggcgtgtacgtggaggtggacatgtttggcctgccctccgac
acgaagaggaagtaccgcactcgcacctccaacaacaactcactggaccccgtgtggcct
gatgagaactttgtcttcaataaggtgatcctgcccaatctagcctcgctgcgagtagcg
gtgtttgaggacagtgggaagttcattgggcaccgcatcctgcccgtgctggcgctgcgc
ccaggctaccactacatcgtcctgaagaatgagctgaatcagcctctcctgcttccctct
ctgctggtgtacattgaggctcaggactacattcccaatgagcaccaagagtatgctgaa
gccctgactaaccccatcaagcacgtttctcttggcctggacccagaagatgagcacgtt
tcagaggaagaggagcgggaggcatttgacgatcgacctgaagaccctaacccctttccc
tcacctccactcccccctgagctccaagacgtccccatccccggagcagtcgttgccccg
aaagagtcatcacagtccctcatcgacactgtactagcagtaattaaggcccagtctata
gatgaattgaaacaacagaaggcttatgtgaagttgctgaagaaacagtgcaaggagctt
aaggagttgcgcaggaaacacatgaggaaggtgtggtccgtgagtaaggaacagaggagt
cggtgtcacaaggtgacctcggacattcagaggcgtcgcagtcaagctgaaaagaagctg
agaatgagcataaaaaaacatgagcctgaggacccggtgcgtacggagctgtgtgctctg
gacgtggagcaccagaaggccacggtgcagctgagagagtggcagatgcaggagctgctc
atgctccgacagggccagcaccaactggagagagagaagaaatacacacacctcaaagag
tcttatcagaaactaaaaaaaattgctagtgattgccaagttacacagctgaagaaactc
aaagacatctgtgaaaaagagaagcgggagcttcagaagatcctggacaggaagagacag
aacagcatcatagaagccaagaagggagacagagagagggccgagtcggagtccaatgag
atcaataggaaacacatccaggagtctgtccacctgatccgccgactggaggagcagcag
gtgaagcgtcaggacaaactgaagctggctcaggtggaggtcttgaagagcatcgaggcc
gatcaaccagtgcaccaggccaggctggagcgggacctggaggccgagctgcagcggctg
cccgacgagatctgccagtacctgcagggggagctagagagcaagggcctgtgcagcgac
gccctcttcagcccgctggccaatcacagcagtccgagctccaactgcagcacgccccct
taccactcgcccagtcacagcgcggggcgcagcctggacaatagcaccatctctctagct
gactcctccctctccaacacgccagtcatgtcggaggcggagcttacacctgtataa
DBGET
integrated database retrieval system
