Clupea harengus (Atlantic herring): 105894209 Help Entry 105894209         CDS       T09045                                  Symbol si:ch211-197l9.2 Name (RefSeq) protein SOGA1   KO K27704   microtubule cross-linking factor Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:char03036]     105894209 (si:ch211-197l9.2) Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Microtubule-associated proteins      105894209 (si:ch211-197l9.2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SOGA SOGA1-2-like_CC TPR_MLP1_2 Striatin Motif Other DBs NCBI-GeneID:  105894209 NCBI-ProteinID:  XP_031421419 Ensembl:  ENSCHAG00000007612 UniProt:  A0A6P8F894 LinkDB All DBs Position 4:complement(19391352..19406525) Genome browser AA seq 1479 aa AA seqDB search MTKAKEEANSAPRARPKKRRSGQEMDDGEGDSCAQPDRAHGRQFVGQHASLHGYGSPQTN EVPLPVKPQDAQSSKPVTKTSVGTTTLRRTPSGGKEMKPEKGKVSGKVKQPSGGSLKSRN KSSGRRKLSDASNTSDELSKDSGCATGKLSSADSSSEMSDCTSEENKLSTDTQCSDIESN SRDGDRTDLGDSVSDIRSEDTNIISSTGANNSLAPGTGSVSPVDERSFASLDSRLNFSSS VAFSDLTGEYVDGMHDELLREIEDLRSENEYLKDEMEELRSEMLEMRDLFLEEDVYQLQE LRQQLDQANKMSRILQYRLRKAERRSLRVAQTGQVDGELIRALEHDVRVAKSVSLRLHGE LESVQKKKAQLEWENVELRERTQDLEVANQVLHNEMDKTRENSLRRRSLRTSSGKSERKL SPQDDSADLKCQLHFAKEESALMCKKLTKMVSENETMGQELAKYRLLYGDVDNTQVSDSM ANSPLAREAEVKVHLRLVEEEATLLSRRIVELEVENRGLRAEMSEMRDRRGGGAGGGAGG VEEEDEPMEGAGEHLVVPVCNDRHELGERQTAVSVKDIAQGRPITLVTKQIQTEEGYSVE VTRLGHNPEEQEKAKKNGADLLSSHTDLNLKDLKTLRDQALLVSSAIDLLRAPAKNGLSP CSNQKTPPLSPYLAKPEADHHSPSALPRPRDLPSLNPLSGELEVLQFQLQVLIERVKSLM DTGEGRKAHSWGPCDPAPPLETREVQKEVLLGKVDLSPGCPCGQETLVLLTLQLRWFLQQ WRQGEEVKDLFEVGCQKKLRLLMEGEETSDSEEANKMSPTASKPFLKQVNGDEDMALLDL TAALQDLGSELQEERRASLELAQRFACAKAAWAVERSELRSIVSRLEGTASKASVKNLPD LKVALQRDHVEKLQHLLADSYAAVMELTRQMKVRERNWSCEKQELLEYLHQLQTEQPACQ TSSQGNMAESSGGKMSDSGRSWGTERTKPKLAPSDASNKNWLYLSEEAALLDQPEACKTW DVPVMPPRFPGLDLQLESTQRSHTAPEKTALRIYYSPPSARRVHLSKLTWDKEDMYVEGK MRERQAGVFPPGPARSRGNEGVGSLSFQGGLPLECNGGGSPTGGASRLPCGFQPPPGFPS ASLLSFGTLQALANLSDDMKEMTASVRGASRGSSLERGRSLMKDAWSQTAAAAQAQSQSR PGAHTVSTGMQTDGVRGLSSGKYWSPRGTTASLVSPRAQQMSSSLERVASRVEKPPPCST SPKLYRRHSASSPFSSTSSSSSPPSSFLSPSLSSSSSSTGPSRLEAPKERGLWGLSQKGS VGSAWARSTTSRAGSVTAANTDKPAGRKSVGIHRYGLVQEFLRNVCGRTDKPATGGAERT GAPTVRRDSIGSAGQKKAERPASRVPLVRNDSVTKIVNRRFMKQGQKEERDGSCDCSSRS LTSCFARPSRSNLHHAHAQCRLRPHDCPTAAAVRSSSNP NT seq 4440 nt NT seq  +upstreamnt  +downstreamnt atgacgaaggcaaaggaagaggcaaattctgcacctcgcgcgcgaccgaagaagcgccga agtggacaggagatggacgatggagagggagactcctgcgcgcaaccagatcgagcgcac gggcggcagtttgtagggcagcacgcgtcactccacggctacggttcgccccaaacaaat gaggtgccgttgccagtaaaacctcaagacgcacagtcaagcaaacctgtcaccaagacc agcgtaggaacgacaacccttcgccgcaccccgagcggaggaaaagaaatgaaaccagag aagggaaaagtgtccgggaaagtcaagcaaccgagcggtggtagcctcaagagtcgcaat aaatcgtcaggacggaggaaactgtccgacgccagcaacacttctgatgagctaagcaaa gactcaggatgcgctactggaaagttgtcgtccgcagacagcagctcagagatgtcggac tgcacgtcggaggagaataaactttctaccgacacccagtgcagcgacattgagtcaaat agccgggatggagacaggactgacctgggggacagtgtctcggacatcagaagtgaagac acaaacatcatcagttcaacaggggccaataactctctggctcctgggactggtagcgtc tcccctgtagacgagcggtccttcgcctcactggacagtcgactgaattttagctcctcg gtggcattttctgacctgacgggagagtatgttgatggaatgcacgacgaacttctccga gagattgaggatttaagatcagaaaacgaatatttaaaagatgagatggaggagctgcgt tcagagatgctggagatgcgtgacctgttcctggaggaggacgtttaccagcttcaggag ctgagacagcagctggaccaggctaacaagatgtcccgcatcctgcagtaccggctgcgc aaggccgagagacgcagtctgcgcgtggcccagaccggacaggtggacggggagctcatt cgcgcgctggaacacgatgtcagggtggcgaagagcgtgtctctgcgtctccatggcgag ctggagtcggtgcagaagaagaaggcccagctggagtgggagaatgtggagctgcgcgag cgaacgcaagacctggaggtggccaatcaggtcctgcacaatgagatggacaagacccga gagaattctctgaggaggagaagcttgaggacatcgtctggcaagtctgaaaggaagctt tccccacaggatgacagtgctgatctgaagtgccagctgcactttgccaaagaggagtct gcactcatgtgcaagaagctgaccaagatggtatctgagaacgagaccatgggccaggag ctggccaagtaccgcttgctctacggcgacgtcgacaacacacaggtgtctgacagcatg gccaactcgcctctcgcacgtgaagctgaggtcaaagttcacctgaggctggtggaggag gaggccacgctgctgagccggcggatcgtggagctggaggtggagaaccgtggcctgcgg gcggaaatgagcgaaatgagggacaggagaggaggaggagcaggaggaggagcaggaggg gtagaggaggaagatgaaccgatggagggggcgggggagcatctcgttgtgccagtctgt aacgacaggcatgagttgggtgagaggcagactgctgtcagtgtgaaggacattgcacag ggtcggcctataacattagtcactaaacaaatacagacggaagaagggtattctgtggag gttacccgtctgggtcataaccctgaagaacaggagaaggccaagaaaaatggtgctgac cttttgagctctcacacagacctcaacctgaaagacctgaagactcttcgcgatcaggcc ctgctggtcagttctgccattgacctcctgagagcgcctgcaaaaaatggcctctcgccc tgttccaaccagaaaacgcctccgctgtccccttacctggccaaaccagaggcagaccat cactcccccagcgctctcccccggcctcgggacctaccctccctaaaccccctctcaggc gagctggaggtgttacagtttcagctacaggttcttattgagcgagtgaagagtttaatg gacacaggagaaggcaggaaggcccacagctggggaccatgtgacccagcgcctcctcta gagaccagggaggtccagaaggaggtactgttggggaaggtggacctgtccccgggatgt ccgtgtggtcaggagaccctggtgctcctcaccctgcagcttcgctggttcctgcaacag tggcgacagggcgaggaagtgaaagacctgtttgaggtgggctgccaaaagaaactacgt ctcctgatggagggggaggagacctcggactctgaggaggccaataagatgagccccaca gcctcaaagcccttcctcaaacaggtgaacggtgatgaagacatggctctgttggaccta acggcggccctgcaggacctgggctctgagctgcaggaggagcggcgggcgagcctggag ctggcacagcggtttgcctgtgccaaagcagcctgggccgtggagaggagcgagctgagg agcatcgtcagcaggcttgagggcacggccagcaaggcgtcggtgaagaacctcccggac ctgaaggtggcgctgcagagggaccacgtggagaaactgcagcatctgttggccgactcg tacgcggcggtgatggagttgacgcggcagatgaaggtgcgcgagcgcaactggagctgc gagaagcaggagctgctggagtacctgcaccagctgcagacggagcagccggcctgccag accagcagccaggggaatatggctgagtcttctggtggcaagatgtctgacagtggaaga tcctggggaacagagaggactaagcccaagcttgctccgtccgatgcctccaataaaaac tggctctacctgagtgaggaggcagcgctgctggaccagccggaggcctgtaagacgtgg gacgtccccgtcatgcctccccggttccctggcctggacctgcagctggagtccacccag aggagccacacggccccggagaagaccgctctgaggatctactacagcccaccgtccgcc cgcagagtgcacctctccaagctgacctgggacaaagaggacatgtatgtggaggggaag atgagggagaggcaggctggagttttcccgcctggaccggcgaggagcagagggaatgag ggcgtcgggtctctgagctttcagggtgggctgccgctggagtgcaacggcggcggcagc cccaccgggggcgccagcaggctgccctgcggcttccagcctccccccggcttcccctct gcctcgctcctatccttcgggaccctgcaggcgttggctaacctgagcgacgacatgaag gagatgacggccagcgtgcgcggggccagccgaggcagctccctggagaggggccggagc ctgatgaaagacgcctggagccagacggctgcagccgcccaggcacagagccagagccgg ccaggggcccacaccgtgagcacgggcatgcagacagacggcgtcaggggcctctcgtcc gggaagtactggtccccccgtggcaccaccgcctcgctggtgtccccccgcgcccagcag atgtcctcgtccctggagcgggtggccagccgggtggagaagcctccaccatgctccacc tcacctaaactctaccgccggcattcagcgtcttccccattctcctcaacttcctcctct tcttcgcctccctcatcgttcctctcgccctccctctcctcttcctcgtcctcgaccggc ccgtcccggctggaggcccccaaagagcgcgggctgtggggtctgtcccagaagggctct gtgggctcggcctgggcccgctccaccaccagcagagccggctccgtcacggcggcaaac acagacaagccggccggccgcaagtccgttgggatccaccgctacggcctggtccaggag ttcctgcgcaacgtgtgcggtcgcacagacaagccggcgacgggaggggcggagaggacc ggggcgcccacggtacggagggacagcatcggctcggcgggacagaagaaggccgaacgg ccggcgtcacgggtaccgctggtgcggaacgacagcgtgacaaagattgtcaaccggagg ttcatgaagcaggggcagaaggaggagagagacggatcctgtgactgcagctcccgttcg ttgacttcctgcttcgctcgcccctcccgctccaacctccaccacgcccacgcccagtgt cggctccgcccacacgactgccccacagcagctgcggtgaggagcagctccaacccttag

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