KEGG   Clupea harengus (Atlantic herring): 105894233
Entry
105894233         CDS       T09045                                 
Symbol
arfgef2
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105894233 (arfgef2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105894233 (arfgef2)
Membrane trafficking [BR:char04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    105894233 (arfgef2)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS Sec7-like_HDS DCB
Other DBs
NCBI-GeneID: 105894233
NCBI-ProteinID: XP_012676167
Ensembl: ENSCHAG00000014726
UniProt: A0A6P3VMM9
LinkDB
Position
4:complement(21052248..21076362)
AA seq 1915 aa
MTCNQHGDAVLRKQRSTSRIERLAPSAQFCFDTPTPAPVQGQADNDGLRELQFGQEMKQQ
LSLEQQLRQQKQTESTKTKSMFLSRALEKILADKEVKRSQHNQLRKACQVALDEIKLELE
KQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLLAYGHITGNAADSS
APGKRLIDRLMETVCNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGSILLTVRTCYN
IYLASRNLINQTTAKATLTQMLNVIFTRMENQAALEAQELERDRSQLNPHNPSPILSRGS
GSPRPAHSSSEHNGQPSPSPSSAELPATPTPPQDTPSLNGQPEEGETQEGEEEDGGGAST
AEQSREEAPSSESEEPAAPAAQPAPEGEGGGEPQAHPEPEPPQGPAGEAQGEQEQEPASG
DADGPPDGGVEQQLESEPEPEPEPEPRPADTAPPPGRLDSQQMNGVVDDRASVSSTDIMD
AETLQGSQSSARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLS
VLQGAGPVFRTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQ
IEVFFREIFLTILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERL
VNDLSKIAMGRSGQEMGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNFQTNLGQ
ERPAEGEGVEVKLPEHLAGRRDSVSSLDSTVSSSVPSSQPDHPEQYEVIKQQKEIIEHGI
ELFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDTTQVGEFLGENVRFNKEAMYCY
VDQLDFCGTDFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYV
LAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIRMKE
SKEYSITPKSNKSNVASEKQRRLLYNMEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVR
PMFKLAWTPLLAAFSVGLQDCDDQEVACLCLEGIRCAIRIACIFNMQLERDAYIQALARF
TLLTASSSITEMKQKNIDTIKTLITVAHTDGNHLGNSWHEILRCISQLELAQLIGTGVKT
RYISGVVRDREGSIKGFPSGSEEFMPLGLGTLVGGQDRRQMAHIQESVGETSSQSVVVAV
DRIFTGSTRLDGNAIVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWS
RIWQVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMK
KNRSPTIRDMVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDETIVELAFQTTGHIV
TNTFQQHFAAAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVSDRPQALREYT
SDDMNVAPGDRAWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGDTFEKHWWH
DLFRIIFRIFDNMKLPEQQTEKTEWMTTTCNHALYAICDVFTQFYEPLSEILLEDLFTQL
QWCVKQDNEQLARSGTNCLENLVILNGEKFSPDVWNVTCACMLEIFQTTCPHALLTWRPA
GQEEEVGDGKHMDVDVDSLSQCSFERTLSERGQSQMSNASDENWKDKSHTRVSDQKLFAG
LLIKCVVQLELIQTIDNIVFYPTTSKKEDAENLAAAQRDSLEEAEEMPGEADQGMYKHMQ
SQHLFKLLDCLLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILF
RMYSDQKLQESWPDIQTRLLLVCSEALGYFISLTSESHREAWTSLLLLMLTRTLRLPDDK
FKPHASCYYPHLCEMMQFDLIPELRAVLRRFFLRIGSVFHIAAPEACSAAPQPAP
NT seq 5748 nt   +upstreamnt  +downstreamnt
atgacgtgtaaccaacatggcgacgcagtgctgagaaagcagcgctcaacatctcggatt
gagcgactagcaccctctgctcagttttgttttgacactccgacacctgctcctgtgcag
ggccaggccgacaatgacggcctgagggagctgcagtttggtcaagagatgaaacagcag
ctcagcctcgaacaacagctacgacagcagaagcagacagaaagcactaaaaccaagagc
atgtttctgtctcgggcactggaaaaaatcttggcggataaggaggtgaaaaggagccag
cacaaccagctgcgaaaagcttgccaagtagctcttgatgaaataaaacttgagcttgaa
aaacaaaaagatggcactgtggtccctccccgagccaactatattgaggcagacaagtat
gtgttgcctttcgagttggcatgtcaatccaagtccccacggattgtcagcacctccctg
gactgcttacagaaacttctagcctatggccacatcaccggcaatgccgcagacagcagc
gctccagggaagcggctgatcgatcggcttatggagaccgtctgtaactgcttccagggc
ccacagacagatgagggtgtgcagcttcaaatcatcaaggctcttcttactgcagtgacc
tcacctcacattgagatccacgagggttccattctgctcacagtgcgcacttgttataac
atctacctggccagccgcaacctgatcaaccagacgacggccaaggccacactcacccag
atgctcaatgtcatcttcacccgaatggaaaaccaggcagctctggaggcccaggagttg
gagagggatcgctcccagctgaatccccacaacccctcacccatcctcagccgaggctct
gggtccccccggcctgctcactcctcctcggagcacaacgggcagccctccccttccccc
agctctgccgagctcccagccacacccacccccccacaggacacaccctccctcaacggc
caaccagaagagggcgagactcaggagggggaggaggaggacgggggaggtgcgtccacc
gccgaacagagcagggaagaagctccatcctcagagtcagaggaaccagccgcacctgct
gcccagcctgcacctgagggcgagggaggtggagaaccccaggcacacccagagccagaa
cccccccaggggccggcaggggaggcccagggggagcaggagcaggagccagccagcggg
gatgctgatggccctcctgatggaggggtggagcagcagctggagtccgagccagagcca
gagccagaaccagagcctaggccagccgacacagcgcctcctcctggtcggctggacagc
cagcagatgaatggcgttgtggacgaccgtgcctctgtgtcctccactgacatcatggat
gccgagacgttgcagggcagccagtctagtgcccggttctcccacatcctgcagaaggac
gccttcctggtgttccgctccctgtgcaagctctccatgaagccccttgctgatgggcct
ccggacccaaagtctcatgagctgcgctctaaggtggtgtctctgcagctgctgctctcc
gtcttgcagggtgcgggccccgtcttccgcacgcacgagatgtttgtcaacgccatcaaa
cagtacctgtgcgtggcgctctccaagaacggagtctcctccgtgcccgaggtcttcgag
ctctccctggccatcttcctcaccctgctctcccacttcaaagtccacctcaagatgcag
atcgaggtcttcttcagagaaatttttctcacaatcttggaaacatcaagcagctcgttt
gagcacaaatggatggtcattcagaccctcactcgcatctgtgctgatgcccagtgtgtg
gtggacatctatgtgaactacgactgtgacttgaacgcggccaacatcttcgagcggctg
gtgaacgacctctctaagattgccatgggccggagtggacaggaaatgggcatgacccca
ctgcaggaactgagcttgcgtaagaaggggctggagtgcctggtgtctatcctcaagtgc
atggtcgagtggagtaaagacctgtacgtcaaccccaacttccagaccaatctaggtcag
gagcgccctgcagaaggggagggtgtggaggtgaagcttccggaacacctggcaggccgc
agggacagcgtcagctccctagactccacagtgtcctccagtgtgccgtcctcccagcca
gaccaccctgagcagtacgaggtcatcaagcagcagaaagagatcattgagcacggcatt
gagctcttcaataaaaaaccgaagagagggatccagtacctgcaagagcaaggcatgctg
ggaactaccccagaagacatagcccagtttctccaccaagaggaacgtttggacacgact
caagtgggagagttcctgggggagaatgtgcgcttcaacaaggaggcgatgtactgctat
gtggaccagctggacttctgtggcacagactttgtttccgccctcagggccttcctggag
ggcttcaggctccccggagaagcccagaaaatcgacagacttatggagaagtttgccgca
cgatacttagagtgcaatcaggggcagacgctgtttgccagtgctgacacggcgtacgtg
ctggcctactccataatcatgctcaccactgacctccacagtccacaggtaaaaaataag
atgaccaaagagcagtacatcaaaatgaaccggggcatcaacgacagcaaggatctgcca
gaggagtacctgtcctccatctatgacgagatcgcagggaagaagattcgcatgaaggag
agcaaagagtactcaatcacgcccaagtccaacaaatcaaatgtggccagtgagaagcag
agacggctgctgtataatatggagatggaacagatggccaagacggccaaagccctgatg
gaggcggtgagccacgcccaggcacccttcttcagcgccacccacctggagcacgtcagg
cccatgttcaagctggcctggacccctctgctggctgcgtttagtgttgggctgcaggac
tgtgatgaccaggaggtggcgtgcttgtgcctggagggaatccgctgtgccatcaggatc
gcctgtatcttcaacatgcagctggagcgggatgcctacatccaggccctggcccgcttc
accctgctcacggccagctccagcataaccgagatgaagcagaaaaacatcgacaccatc
aagaccctcatcaccgtggcacacaccgacggaaaccacctgggcaactcctggcatgag
atcctgcgctgtattagccagctggaactggcccagctgatcggcacgggggtgaagacg
cgctacatctccggcgtggtgcgtgaccgggagggcagcatcaagggcttcccctccggc
agtgaggagttcatgcctttaggcctgggaactctggtgggaggtcaagacagacgtcag
atggcccacattcaggaatcagtcggagagaccagttctcagagtgtggtggtagctgtg
gaccggattttcactggttcaacgaggctggatggaaatgctattgttgactttgtgcgt
tggctgtgtgccgtctccatggacgagctggcctccgctcaccagccgcgcatgttcagc
ttgcagaagatcgtggagatctcctactacaacatgaaccgcatccggctccagtggtcc
cgcatctggcaggtcattggagatcacttcaataaggtcggctgtaaccccaatgaggat
gtcgccatctttgctgttgattccttgaggcagctctctatgaaattccttgaaaaagga
gaacttgctaacttccgcttccagaaggatttcctgcggccattcgaacatatcatgaag
aagaacaggtcccccaccatcagggacatggtgatccgttgtgtggcacagatggtgaac
tctcaggccgccaacatccgctccggctggaaaaacatcttctccgtgttccaccaggcc
gcctccgaccatgacgagaccatcgtggagctggccttccagaccaccggacacatcgtc
accaacacctttcagcaacactttgccgcggcgatcgactcgttccaggatgcagtgaag
tgtctgtcagagtttgtgtgcaacgccgcgtttccagacaccagcatggaggccatccgc
ctcatccgccactgcgccaaatacgtgtctgaccggccacaggctctgagggagtacacc
agtgacgacatgaacgtggctcctggtgaccgggcgtgggtgcgaggctggtttcccatc
ctgtttgagctctcctgcatcatcaaccgctgcaaactggatgtgcggaccaggggtctg
acggttatgtttgagataatgaagagctatggtgacaccttcgagaagcactggtggcac
gacctcttccgcattatcttccgcatctttgacaacatgaagctgccagagcaacaaact
gagaagacggagtggatgaccacgacctgcaaccacgccctgtacgccatctgtgacgtg
ttcacacagttctacgagccgctcagcgagatcttgcttgaagatctcttcacccagctc
cagtggtgtgtcaaacaagataacgaacagctggctcggtcaggaactaattgcctggag
aacctggtgatcctgaacggggaaaagtttagtcctgacgtttggaatgtcacctgtgcc
tgcatgctggagatcttccagaccacctgccctcatgcgttgttgacatggcgacctgca
gggcaggaagaggaggtgggagatgggaaacacatggatgtggacgtagactccctgtcc
caatgcagctttgaaaggacgctgtcagaacgtggacagagtcagatgtccaacgccagt
gatgagaactggaaggacaagtcccacaccagggtatctgaccagaagctctttgctggt
ctcctcatcaagtgtgtggtacagctggaactgattcagaccatagacaacatcgtcttc
tacccaaccactagcaagaaggaggatgctgagaatttggcagcagcacagagggattca
ctggaggaggcagaggagatgccgggggaggcagatcagggcatgtacaagcacatgcaa
tcacagcatcttttcaaactcctcgactgcctgctggagtcccacacttttgcccgagac
ttcaactccaacaacgagcagaggacggcactctggagggcaggatttaagggcaaatca
aagcccaacctgctgaagcaggagaccagcagtctggcctgcagccttcggatcctgttc
cgcatgtactctgaccagaagctccaagagtcctggccagacatccagacccgcttactg
cttgtctgtagtgaagccctgggctacttcatcagtcttacatcagagagtcacagagag
gcttggaccagcttgctgcttctgatgctcaccaggacactccgactacctgatgataag
tttaagccgcacgcgtcctgttactacccccacctgtgtgagatgatgcagttcgacctg
atccccgagctgcgcgccgtgctgcgccgcttcttcctccgcatcggttccgtcttccac
atcgccgccccggaggcctgctctgccgcccctcagcctgcaccctaa

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