Clupea harengus (Atlantic herring): 105894233
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Entry
105894233 CDS
T09045
Symbol
arfgef2
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105894233 (arfgef2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105894233 (arfgef2)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
105894233 (arfgef2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
Sec7-like_HDS
DCB
Motif
Other DBs
NCBI-GeneID:
105894233
NCBI-ProteinID:
XP_012676167
Ensembl:
ENSCHAG00000014726
UniProt:
A0A6P3VMM9
LinkDB
All DBs
Position
4:complement(21052248..21076362)
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AA seq
1915 aa
AA seq
DB search
MTCNQHGDAVLRKQRSTSRIERLAPSAQFCFDTPTPAPVQGQADNDGLRELQFGQEMKQQ
LSLEQQLRQQKQTESTKTKSMFLSRALEKILADKEVKRSQHNQLRKACQVALDEIKLELE
KQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLLAYGHITGNAADSS
APGKRLIDRLMETVCNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGSILLTVRTCYN
IYLASRNLINQTTAKATLTQMLNVIFTRMENQAALEAQELERDRSQLNPHNPSPILSRGS
GSPRPAHSSSEHNGQPSPSPSSAELPATPTPPQDTPSLNGQPEEGETQEGEEEDGGGAST
AEQSREEAPSSESEEPAAPAAQPAPEGEGGGEPQAHPEPEPPQGPAGEAQGEQEQEPASG
DADGPPDGGVEQQLESEPEPEPEPEPRPADTAPPPGRLDSQQMNGVVDDRASVSSTDIMD
AETLQGSQSSARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLS
VLQGAGPVFRTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQ
IEVFFREIFLTILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERL
VNDLSKIAMGRSGQEMGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNFQTNLGQ
ERPAEGEGVEVKLPEHLAGRRDSVSSLDSTVSSSVPSSQPDHPEQYEVIKQQKEIIEHGI
ELFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDTTQVGEFLGENVRFNKEAMYCY
VDQLDFCGTDFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYV
LAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIRMKE
SKEYSITPKSNKSNVASEKQRRLLYNMEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVR
PMFKLAWTPLLAAFSVGLQDCDDQEVACLCLEGIRCAIRIACIFNMQLERDAYIQALARF
TLLTASSSITEMKQKNIDTIKTLITVAHTDGNHLGNSWHEILRCISQLELAQLIGTGVKT
RYISGVVRDREGSIKGFPSGSEEFMPLGLGTLVGGQDRRQMAHIQESVGETSSQSVVVAV
DRIFTGSTRLDGNAIVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWS
RIWQVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMK
KNRSPTIRDMVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDETIVELAFQTTGHIV
TNTFQQHFAAAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVSDRPQALREYT
SDDMNVAPGDRAWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGDTFEKHWWH
DLFRIIFRIFDNMKLPEQQTEKTEWMTTTCNHALYAICDVFTQFYEPLSEILLEDLFTQL
QWCVKQDNEQLARSGTNCLENLVILNGEKFSPDVWNVTCACMLEIFQTTCPHALLTWRPA
GQEEEVGDGKHMDVDVDSLSQCSFERTLSERGQSQMSNASDENWKDKSHTRVSDQKLFAG
LLIKCVVQLELIQTIDNIVFYPTTSKKEDAENLAAAQRDSLEEAEEMPGEADQGMYKHMQ
SQHLFKLLDCLLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILF
RMYSDQKLQESWPDIQTRLLLVCSEALGYFISLTSESHREAWTSLLLLMLTRTLRLPDDK
FKPHASCYYPHLCEMMQFDLIPELRAVLRRFFLRIGSVFHIAAPEACSAAPQPAP
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaaccaacatggcgacgcagtgctgagaaagcagcgctcaacatctcggatt
gagcgactagcaccctctgctcagttttgttttgacactccgacacctgctcctgtgcag
ggccaggccgacaatgacggcctgagggagctgcagtttggtcaagagatgaaacagcag
ctcagcctcgaacaacagctacgacagcagaagcagacagaaagcactaaaaccaagagc
atgtttctgtctcgggcactggaaaaaatcttggcggataaggaggtgaaaaggagccag
cacaaccagctgcgaaaagcttgccaagtagctcttgatgaaataaaacttgagcttgaa
aaacaaaaagatggcactgtggtccctccccgagccaactatattgaggcagacaagtat
gtgttgcctttcgagttggcatgtcaatccaagtccccacggattgtcagcacctccctg
gactgcttacagaaacttctagcctatggccacatcaccggcaatgccgcagacagcagc
gctccagggaagcggctgatcgatcggcttatggagaccgtctgtaactgcttccagggc
ccacagacagatgagggtgtgcagcttcaaatcatcaaggctcttcttactgcagtgacc
tcacctcacattgagatccacgagggttccattctgctcacagtgcgcacttgttataac
atctacctggccagccgcaacctgatcaaccagacgacggccaaggccacactcacccag
atgctcaatgtcatcttcacccgaatggaaaaccaggcagctctggaggcccaggagttg
gagagggatcgctcccagctgaatccccacaacccctcacccatcctcagccgaggctct
gggtccccccggcctgctcactcctcctcggagcacaacgggcagccctccccttccccc
agctctgccgagctcccagccacacccacccccccacaggacacaccctccctcaacggc
caaccagaagagggcgagactcaggagggggaggaggaggacgggggaggtgcgtccacc
gccgaacagagcagggaagaagctccatcctcagagtcagaggaaccagccgcacctgct
gcccagcctgcacctgagggcgagggaggtggagaaccccaggcacacccagagccagaa
cccccccaggggccggcaggggaggcccagggggagcaggagcaggagccagccagcggg
gatgctgatggccctcctgatggaggggtggagcagcagctggagtccgagccagagcca
gagccagaaccagagcctaggccagccgacacagcgcctcctcctggtcggctggacagc
cagcagatgaatggcgttgtggacgaccgtgcctctgtgtcctccactgacatcatggat
gccgagacgttgcagggcagccagtctagtgcccggttctcccacatcctgcagaaggac
gccttcctggtgttccgctccctgtgcaagctctccatgaagccccttgctgatgggcct
ccggacccaaagtctcatgagctgcgctctaaggtggtgtctctgcagctgctgctctcc
gtcttgcagggtgcgggccccgtcttccgcacgcacgagatgtttgtcaacgccatcaaa
cagtacctgtgcgtggcgctctccaagaacggagtctcctccgtgcccgaggtcttcgag
ctctccctggccatcttcctcaccctgctctcccacttcaaagtccacctcaagatgcag
atcgaggtcttcttcagagaaatttttctcacaatcttggaaacatcaagcagctcgttt
gagcacaaatggatggtcattcagaccctcactcgcatctgtgctgatgcccagtgtgtg
gtggacatctatgtgaactacgactgtgacttgaacgcggccaacatcttcgagcggctg
gtgaacgacctctctaagattgccatgggccggagtggacaggaaatgggcatgacccca
ctgcaggaactgagcttgcgtaagaaggggctggagtgcctggtgtctatcctcaagtgc
atggtcgagtggagtaaagacctgtacgtcaaccccaacttccagaccaatctaggtcag
gagcgccctgcagaaggggagggtgtggaggtgaagcttccggaacacctggcaggccgc
agggacagcgtcagctccctagactccacagtgtcctccagtgtgccgtcctcccagcca
gaccaccctgagcagtacgaggtcatcaagcagcagaaagagatcattgagcacggcatt
gagctcttcaataaaaaaccgaagagagggatccagtacctgcaagagcaaggcatgctg
ggaactaccccagaagacatagcccagtttctccaccaagaggaacgtttggacacgact
caagtgggagagttcctgggggagaatgtgcgcttcaacaaggaggcgatgtactgctat
gtggaccagctggacttctgtggcacagactttgtttccgccctcagggccttcctggag
ggcttcaggctccccggagaagcccagaaaatcgacagacttatggagaagtttgccgca
cgatacttagagtgcaatcaggggcagacgctgtttgccagtgctgacacggcgtacgtg
ctggcctactccataatcatgctcaccactgacctccacagtccacaggtaaaaaataag
atgaccaaagagcagtacatcaaaatgaaccggggcatcaacgacagcaaggatctgcca
gaggagtacctgtcctccatctatgacgagatcgcagggaagaagattcgcatgaaggag
agcaaagagtactcaatcacgcccaagtccaacaaatcaaatgtggccagtgagaagcag
agacggctgctgtataatatggagatggaacagatggccaagacggccaaagccctgatg
gaggcggtgagccacgcccaggcacccttcttcagcgccacccacctggagcacgtcagg
cccatgttcaagctggcctggacccctctgctggctgcgtttagtgttgggctgcaggac
tgtgatgaccaggaggtggcgtgcttgtgcctggagggaatccgctgtgccatcaggatc
gcctgtatcttcaacatgcagctggagcgggatgcctacatccaggccctggcccgcttc
accctgctcacggccagctccagcataaccgagatgaagcagaaaaacatcgacaccatc
aagaccctcatcaccgtggcacacaccgacggaaaccacctgggcaactcctggcatgag
atcctgcgctgtattagccagctggaactggcccagctgatcggcacgggggtgaagacg
cgctacatctccggcgtggtgcgtgaccgggagggcagcatcaagggcttcccctccggc
agtgaggagttcatgcctttaggcctgggaactctggtgggaggtcaagacagacgtcag
atggcccacattcaggaatcagtcggagagaccagttctcagagtgtggtggtagctgtg
gaccggattttcactggttcaacgaggctggatggaaatgctattgttgactttgtgcgt
tggctgtgtgccgtctccatggacgagctggcctccgctcaccagccgcgcatgttcagc
ttgcagaagatcgtggagatctcctactacaacatgaaccgcatccggctccagtggtcc
cgcatctggcaggtcattggagatcacttcaataaggtcggctgtaaccccaatgaggat
gtcgccatctttgctgttgattccttgaggcagctctctatgaaattccttgaaaaagga
gaacttgctaacttccgcttccagaaggatttcctgcggccattcgaacatatcatgaag
aagaacaggtcccccaccatcagggacatggtgatccgttgtgtggcacagatggtgaac
tctcaggccgccaacatccgctccggctggaaaaacatcttctccgtgttccaccaggcc
gcctccgaccatgacgagaccatcgtggagctggccttccagaccaccggacacatcgtc
accaacacctttcagcaacactttgccgcggcgatcgactcgttccaggatgcagtgaag
tgtctgtcagagtttgtgtgcaacgccgcgtttccagacaccagcatggaggccatccgc
ctcatccgccactgcgccaaatacgtgtctgaccggccacaggctctgagggagtacacc
agtgacgacatgaacgtggctcctggtgaccgggcgtgggtgcgaggctggtttcccatc
ctgtttgagctctcctgcatcatcaaccgctgcaaactggatgtgcggaccaggggtctg
acggttatgtttgagataatgaagagctatggtgacaccttcgagaagcactggtggcac
gacctcttccgcattatcttccgcatctttgacaacatgaagctgccagagcaacaaact
gagaagacggagtggatgaccacgacctgcaaccacgccctgtacgccatctgtgacgtg
ttcacacagttctacgagccgctcagcgagatcttgcttgaagatctcttcacccagctc
cagtggtgtgtcaaacaagataacgaacagctggctcggtcaggaactaattgcctggag
aacctggtgatcctgaacggggaaaagtttagtcctgacgtttggaatgtcacctgtgcc
tgcatgctggagatcttccagaccacctgccctcatgcgttgttgacatggcgacctgca
gggcaggaagaggaggtgggagatgggaaacacatggatgtggacgtagactccctgtcc
caatgcagctttgaaaggacgctgtcagaacgtggacagagtcagatgtccaacgccagt
gatgagaactggaaggacaagtcccacaccagggtatctgaccagaagctctttgctggt
ctcctcatcaagtgtgtggtacagctggaactgattcagaccatagacaacatcgtcttc
tacccaaccactagcaagaaggaggatgctgagaatttggcagcagcacagagggattca
ctggaggaggcagaggagatgccgggggaggcagatcagggcatgtacaagcacatgcaa
tcacagcatcttttcaaactcctcgactgcctgctggagtcccacacttttgcccgagac
ttcaactccaacaacgagcagaggacggcactctggagggcaggatttaagggcaaatca
aagcccaacctgctgaagcaggagaccagcagtctggcctgcagccttcggatcctgttc
cgcatgtactctgaccagaagctccaagagtcctggccagacatccagacccgcttactg
cttgtctgtagtgaagccctgggctacttcatcagtcttacatcagagagtcacagagag
gcttggaccagcttgctgcttctgatgctcaccaggacactccgactacctgatgataag
tttaagccgcacgcgtcctgttactacccccacctgtgtgagatgatgcagttcgacctg
atccccgagctgcgcgccgtgctgcgccgcttcttcctccgcatcggttccgtcttccac
atcgccgccccggaggcctgctctgccgcccctcagcctgcaccctaa
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