Clupea harengus (Atlantic herring): 105894243
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Entry
105894243 CDS
T09045
Symbol
zbtb48
Name
(RefSeq) telomere zinc finger-associated protein
KO
K10519
zinc finger and BTB domain-containing protein 48
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105894243 (zbtb48)
04121 Ubiquitin system [BR:
char04121
]
105894243 (zbtb48)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
105894243 (zbtb48)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105894243 (zbtb48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_15
zf-C2H2_6
zf-Di19
zf-C2H2_jaz
zf-C2H2_11
BTB_KLHL33
zf-C2H2_16
zf-C2HC_2
zf-C2H2_ZNF462
Motif
Other DBs
NCBI-GeneID:
105894243
NCBI-ProteinID:
XP_031422630
Ensembl:
ENSCHAG00000023822
UniProt:
A0A6P8FG89
LinkDB
All DBs
Position
4:21812873..21828291
Genome browser
AA seq
777 aa
AA seq
DB search
MDQQASAHAQRVIHMLNQQRELGQFCDVVLSVSTGQVYLAHRNILACFSQLFQDSSSNTT
ENTEVNLPQDCPSDGLQHLLDFFYTGELKLENVSWERVHDAASALSVSNTLIPAQPSPRT
AVSETNLADLTNSEGKPESVVLAADKTDGVPVKERSRHRQIARHKLDSAPGTTEASESIT
ITTTRSGRRVKEPRRLVGQNSTEVTSQIGIPRRQGSTLSKEDINAKAVSAETESKSSGRG
GNQPEQVTGPILDGSDQNKTALDNDLEDDTFDGNAGVDALSEDTDEEYMPSSSPSIKAMP
GQRPKRRGQGKPLNKEKAEDATKESKKGSVQCPTCHKTFLSKYYLKVHNRRHTGEKPFKC
EMCGKCYYRKENLLEHQRRNCQSRTEVVFSCSVCPKIFHRRQELRVHMVSHTGEMPNKCT
SCSEQFMQKKDLRIHLIKVHGAPKPHACSLCTKCFFSRTELHLHEASKHRGEKLFVCEEC
GHRASSRNGLQMHIKAIHRNERPFVCEFCNHAFTQKANLNMHLRTHTGEKPFQCHLCGKT
FRTQASLDKHHRTHTGERPYACEFCEQRFTEKGPLLRHVASKHQEGRPHYCQICSKTFKA
VEQLRVHVRRHKGMRKFECSQCGYKFTRQAHLRRHAQIHNRVENYNPRQRRLRNLIVDAT
EDKEMTSSTPPANQGAAAEAQTDVIGVLIQPGTIVVQGVVPGQGASEPSNGERQTGFPVI
STAGSSTGRAQVGFAVLPAQAAVSSSNGETEFTVVDVLEHNLLVTDAYPIQHTESDH
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaggcctctgctcatgcacagcgagtgatacacatgctgaaccaacagagg
gagttgggtcagttttgtgacgtagtattaagcgtcagtacaggacaggtgtaccttgcc
catcgcaatatccttgcctgctttagtcaactgttccaggatagcagctccaacaccact
gagaacacggaggtgaacctccctcaggactgcccctcggatggactgcagcaccttcta
gacttcttctacacgggcgaactcaagctggagaatgtcagctgggaacgggtacatgat
gcagcaagcgctctatcagtgtcaaatacactcatccctgcccaaccctcaccaagaaca
gctgtttctgaaacaaacctggctgatttgaccaacagtgaaggtaaaccggagagcgtt
gtgcttgctgcggataagacagatggtgtgcctgttaaggagaggagtagacatcggcag
atagccagacataagcttgattctgcccctggcacaacagaggcttcagagtccatcacc
atcacaactactcgatctgggcggagggtgaaagagcctaggcgtcttgttggacagaac
tccacagaggtgacttctcaaattggcatacccagaagacaaggctcaacactttctaag
gaggacatcaatgcaaaggcagtcagtgccgagacagagagcaagagcagtggccgagga
gggaaccagccagagcaggtaactgggcccatcctggatggaagtgaccaaaataaaact
gccttggacaatgacctggaagatgatacttttgatggcaatgctggagttgatgctctc
agtgaggatacagatgaagagtacatgcccagtagttcaccctccatcaaggccatgcca
gggcagcgccccaagcgcaggggtcagggaaagcctttgaataaagagaaagccgaagac
gcaacaaaggaaagcaagaaaggttctgtgcagtgccccacttgtcataaaaccttccta
agcaaatattacctcaaggttcataacaggagacacacaggtgagaagccctttaagtgt
gagatgtgtggaaaatgctactacaggaaggagaatctgcttgagcatcagagaagaaat
tgtcagagcagaaccgaagtggtgttttcatgctctgtgtgcccaaagatatttcaccgg
cgccaagagctccgtgttcatatggtctcacacactggggagatgcccaacaagtgtact
tcatgctctgaacagtttatgcagaagaaggacctcaggatccacctgatcaaagtccac
ggagctcctaaacctcatgcgtgctctctctgcaccaagtgcttcttttcacgcacagaa
ctgcatctccatgaagcctcaaagcaccgtggtgagaagctctttgtatgtgaggaatgt
ggtcaccgtgcctccagccgaaatggcttgcagatgcacataaaggcaatacacaggaat
gagcgaccatttgtgtgtgaattctgcaaccacgcttttacccagaaagccaatctcaac
atgcacctgcgcacacatacaggggagaagcccttccagtgtcacttgtgtggcaaaaca
ttccgtacacaagccagtcttgataagcaccaccgtacacacactggcgagcgtccctat
gcctgtgagttctgtgaacagcgtttcacggagaaaggtcccctgctccgtcatgttgcc
agcaaacatcaagagggccgccctcattactgccaaatctgcagcaagacctttaaggct
gtagaacagcttcgtgttcatgtgcgacgtcacaaaggaatgagaaagtttgagtgttcg
cagtgtggctacaagttcaccagacaggctcatcttaggcgtcatgctcagatccacaat
cgtgtggagaactacaacccccggcaacggcgtctccgtaacctcattgtggatgcgacg
gaagacaaggagatgacctcatccactcctccagccaatcaaggggctgctgctgaggcc
caaacggatgtcattggtgttctgatccagccagggaccatcgtggtgcagggagtagtg
ccaggccagggtgcatcggagcccagtaatggagaacgccagactgggtttcctgtgatc
tcaacagcaggcagcagcactggcagagcgcaggttgggtttgctgtgttaccagcacaa
gcggcggtgtcctccagtaatggggagacggagtttacagtggtggatgtgttagagcac
aacttactggtgacagatgcatatcccatacagcacactgagtcagaccactag
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