Clupea harengus (Atlantic herring): 105894271
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Entry
105894271 CDS
T09045
Symbol
cpeb2
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04114
Oocyte meiosis
char04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
105894271 (cpeb2)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
105894271 (cpeb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105894271 (cpeb2)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105894271 (cpeb2)
Factors involved in mRNA localization
Trans-acting binding proteins
105894271 (cpeb2)
mRNA cycle factors
P-body specific factors
105894271 (cpeb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
ConA_like_dom_Wo
Motif
Other DBs
NCBI-GeneID:
105894271
NCBI-ProteinID:
XP_012676206
Ensembl:
ENSCHAG00000021191
UniProt:
A0A6P3VN84
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Position
10:complement(7397818..7419418)
Genome browser
AA seq
851 aa
AA seq
DB search
MGDYGFSLLQTVSINNNSSTHFGGGAFRSYSTPSPVSTGQLYPNSTPVSGNTVPGVSSLF
LSATAHHQNMQDEPVGVTTSQQPLLIEQTNDNSRKTGHLQANSSNNNHSNQLGFNTQDYN
ALYQNQQQFADFKATVGQEQFCPTQSICDLQHDRKIHQQLSQQAEFGCSEPPPPQGEFSH
LPQKQPYTTVGSTESDPNTDSSHDQIRSLSVEKAEADVVAAASPSPTSVNPNKVKIQMDS
PNSHHINNGNGTGTGNNILPGGIGAGFSNLPHQEMQNAGGGSASPTLPGFGTPWSVQTSS
PPPPISNSANPSHANAMNQIPNAEPENNFYPGIPSSINPAFFQSFSSVSTNPCAGINVQG
FSSPFSPQINIPPQQPQSRRSPVSPQMHPQQGAYLQQRNNYNHHQPMVKQSPWGSHQGSG
WNSGGMNWGRDHRRVGMGVPGSVSQVSPMKKPFSSNVIAPPKFPRSAGSMGPKSWIEENV
FRTDNNSNTLLPMQDRPRMYDSLNMHSLESSLIDIMRAEQDPLKGRVGCPHPGADGLLML
NARSYGRRRGRSSLFPIDDVLLDDGHGNQGGPGGLGSPNCYPHQNGERIERFSRKVFVGG
LPPDIDEDEITTSFRRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIEACLEE
DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAM
IMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVK
PYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGA
DRPRQIHFRWN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttagcttgctccagacagtaagtataaacaacaacagctccaca
cacttcggcggaggcgcttttaggtcctactcgaccccctctccggtttccaccggccag
ctctaccccaactcgactccggtctctggcaacactgtccccggcgtgtcctctctattc
ctgtcagctactgcgcatcatcaaaacatgcaggatgagcctgtgggggtgacaacctcg
cagcaacccctgttaatcgagcaaaccaacgacaacagcagaaaaaccggtcatctgcaa
gctaacagcagcaacaacaaccacagcaaccaactgggatttaacacacaggactacaac
gccctgtatcagaaccaacagcagttcgccgattttaaagcaactgtaggtcaagaacag
ttctgtccgacgcagtcgatctgtgaccttcagcacgaccggaaaatacatcagcagtta
agtcagcaggctgagttcggctgctcagagccgcccccaccccaaggagaatttagtcac
ctgcctcagaagcagccttacaccaccgtcggctcgaccgaatccgatcctaacacggac
tcgagccacgatcaaattcgcagcttgtcggtggagaaggcagaagccgatgtggttgct
gccgcgtcgccatcgcccacttccgtgaatccaaacaaggtaaagatccaaatggactcc
cccaactcccatcacataaacaacggcaatggcaccggtaccggcaataacatactgcct
ggaggtatcggagccggcttctctaacctcccacatcaagaaatgcagaatgcgggaggc
ggctcagcttcgccgacactccctggtttcggaaccccttggtccgttcagacgagctcc
ccaccaccacccatctccaactcagccaaccccagccatgcaaacgcgatgaaccagata
cctaacgcagaacctgaaaacaatttttacccggggattccctcctccatcaacccggcc
ttcttccagagcttttcatcggtgtctactaatccttgcgccgggattaacgtgcaaggc
ttcagcagccctttctcgccccagatcaacatccccccacagcagccccagagccgccgg
tccccggtcagtccccagatgcacccgcaacagggagcctatttgcagcagaggaacaat
tacaaccatcaccagcctatggtgaagcagtctccctggggcagtcaccagggcagtggc
tggaactctggagggatgaactggggaagagaccaccgccgcgtggggatgggggtcccc
ggttctgtcagccaggtctctcccatgaagaaacccttctccagcaatgtcatcgcccct
cccaagttcccccgctcggctggttccatggggcccaagtcctggatagaggagaacgtt
ttccgcaccgataacaacagcaatactctgttgccaatgcaggatcgcccccgaatgtat
gacagtctaaatatgcactccctggaaagctccctgattgacatcatgcgggcggagcag
gaccccctgaagggccgtgtgggatgccctcaccccggggcagatggtctgctcatgctc
aatgcacggagctatgggagacgacgaggacgttcttccttgttcccgatcgacgacgtt
ctcctcgacgacggccatggcaaccagggcggccctggaggtcttggctcccctaactgc
taccctcaccagaatggggagcgcattgagcgtttctcccgtaaggtgtttgtgggaggc
ctccctccagacattgatgaagatgaaatcaccacaagcttccgccgcttcggccatctg
gtggtggattggcctcacaaggccgagagcaaatcctacttcccccctaaaggttacgcc
tttctgctgttccaagaggagagctctgttcaggctctgatcgaggcctgtctggaggag
gatggcaagctctacctgtgtgtgtccagtccaaccatcaaggacaagccagtccagatt
cgtccgtggaatctgagcgacagtgactttgtgatggacggctctcagcccctcgacccg
cggaagaccatctttgtaggaggcgtccctcgcccccttcgtgcagtggagctggccatg
atcatggatcgtttgtatggcggcgtctgctacgctggcatcgacaccgacccggagctc
aagtaccccaagggggcgggtcgtgtggccttctccaatcagcagagctacatcgctgcc
atcagcgctcgattcgttcagctgcagcatggggacattgacaaacgggtggaggtgaag
ccctacgtcctggacgaccagctgtgtgatgagtgccagggggcacgctgcgggggcaag
tttgcgcccttcttctgcgctaacgtcacctgcctgcagtactactgtgagttctgctgg
gccaacatccactctcgtgccggccgtgagttccacaaacccctggtcaaagagggggcc
gatcgcccacgccagatccactttcgctggaactga
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